XLOC_004835 (gene) - C. hemisphaerica

Overview
NameXLOC_004835
Unique NameXLOC_004835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:670353..673916-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004835 ID=XLOC_004835|Name=XLOC_004835|organism=Clytia hemisphaerica|type=gene|length=3564bp|location=Sequence derived from alignment at sc0000086:670353..673916- (Clytia hemisphaerica)
AGCAGAAGAACTTCGAACCAACGGACGTGCGCAATGACGACACCAGTGCA
GTAGATTTCTTCACACAATACACAAAAGTTTTACAACAAGCTCACGGGAA
TATTGAAGATATTGACGAAGAAGCAATCAATGGAAATGATGATGTTGATG
ATGATGGTGGTGAAGGTAAAGAAAAACAGGAAGAAGAAAAAGAACAACAG
ATTCCTCTTCATTTTGATATTCTGATCAAGGTTTGTATTATTCTAACGTC
CCGGATTAGTCGGTCGGTCGGTCCAAAATATTACAAACAGGGAGACTTAA
TTGCCAGAGGGAGGGTTGGAATTTGTACCCCTAAAAACCACAGAATAAGA
TGATTATGGAATAAATCCAGGTTATTAAGAGCAATTCAGCTTTTGATAGT
TTAAGATTTTCAAAAAATAAATCGAAAATTAATAACCGGGGTCGACGTTT
ATTCGGGAACTTACTATACCTCAGAATTTTAAACCATACCAGCGTAGTTA
CCAGACTGGTTGTGGCTTCCACGTGATACAAAGACGCATTATGTGATTTC
ATATGATGTAACCTCTAAATGTTCTTTAATTAAAACTGTTCTGAAATAAT
TTGTAAATATGATTTCCATTCTACAGGCTTTGGAGAGATGCACCTATTTC
AACTCAGCCCATCACCGTGAGATACAATTGAAATCGCTAGACGTCACTCA
ACACTGCGTCATCGCGTTAAGACAGCGTGAAAATGATTTGCTGCCGGCTC
TCCACAAAATCTGGCCAAGCGTCGTTACAAAGCTTCATTCAAAAGATATG
GTGAGTGACGTCAATCTCTGGGAAAAAAAGCTTTGACGAAGAAAACACCA
TCTTGATTTACGTGACACAGAAACAGGGTAGACCTCTCAGAGTCACTGAG
GGAGTGTCTATGATCTGTTCATAGCCCCCCTTTCGTGGAAACAATAGCTC
GGTTGTCTAAATGCTGTATGTGTATGTCTATAATTGTGTACAGTTGACTC
TCTCTAATTCGATCTTCAAGGGACCAAAAATTTTCTTCGAATTATAGAAA
GAATCTAATCATAAAGAGTAATTTAAACCACCTCCAAGCTGAGGGGACCA
ATATTGTTGTTCGAATTACAGAATAATAGAGGTTCGAATTAGAGAGAGTT
GTTTGTCTAAAAATAATCTTTATGACGCGGTCTTTGAGCTAAACTTTATT
CTGTTCTTCTCAGGTCATTGTGCTTAAGAGCCTGGATATTGTTTCGTGCA
TGGTCACACACTCTGGAGATTTCCTACGTAAGCGTTTGACCACGGAGTTC
CTTTCAAGGGCAATGCAATTCTTAGAAGAACACAACCAAAGTTTTTCCAA
AAACAAATCTAGGTTCACGCAAATTCATAAAGCCTTGATCAAGATGATAA
GTTTTCTTGCTGACACTGCAGTTTCCTTAGATGTTGGATTAAAAGATTTT
TGTAACGTTGTCCAAATATGTGCCAAATATTTGAACTGTCATCTACACGA
AGCTGTTCAAAAGGTATCATTAGCTTTTTATATCCTTTTGGGTCTCTCAA
AAGCTAAGAAAACCATGAACATTAAAAAAAGTATGGGTTGTAGGTTTATG
TTAAGGCTCAATTTATGTTTTTTACTCCGGGGGGAGTGTTAAATTTTCAC
CCTATTAGACCTCTCCTGTGAAAACCAAAAAAGTCACCCGAAGGGTAGAA
AGTTTTTATGAGGCTAACTTTTTCGTCAAAGTCTCCAATGGTGTCAGTGT
TTGAGTTTCGTTCTGAAGATTGCCGTCATTCTCCTACCTGTCTCATATCA
TAGATTGTTTGACCTACCTGGAGGTCCTATAAATTAACCTGTGTGCGTCC
GTCCGTCCGTCTGTTACCAACTTTTCTCGGGATTGAATAATAGGAATCTT
TTGATTTTTGGTACAAAGGTGCAAAATGGTGGTGGGCAAAATGTGACGGA
GCCCGATTTTCTAAAAAAAAAATTTTTGGGCAAATTTGGGCCAAAAAACG
GCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATTGGATCATTAAATTTTTCTGATTTTTTGCATGAAAGTAGGGT
ACCATCATAGGTAAAAGATGGCTGAAGCAGATTTTTGCAAAAAAATTTTG
TTGGCTCAAAATACGCATGTTTATCTATAAGAATCACTTGTAATAAGCAT
ACATCAATGTTCTTAGTCAAATTACTCAATTTTTATATGAGAAAGATGTT
TTTTTTGCTCATGAGGCCTTACTGTTGAAGAGTATGTGTGTTTAGACAGG
AAATTTGGGTTGCTTGGCGTGTTTTTATAAAAAAAATGGCCAAATTCGAT
ATTTTTTTATAAGCACATTATCAATTCCTTAGGTATTAGCTTTTCTCGAG
ATTGGCTCTTTCATTCTTTATGATTTATTGCACAAACATGCATAACTATA
AACCCTCGAATGTAACGGAGCCCGATTTCCGAAAGAAAATGTTTTGGGGC
AAATTTGGGCCAAAAAACGGCTGAAAAAAGGGTTCATTAATTAATTGGAT
CATTAATTTTTTCTGATTCTTTGCATGAAAGTAGGTAAAAGATGGCTGAA
GCAGATTTTTGTAAAAGAAGAATTTTTCAGCTCAAAAAAACGCATCTTTA
TCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATT
ACTCAATTTTTTGATGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAACAAACGAC
TAATTTTAATAGATCGTCACTATTAGTGTTCTGAATGATTGTTTATTGGT
CACGTCACGTAGATATCAATTATAAATGTGTTAAATGCATAACCAGGTAG
GTCCATAAAAGTATCACTTGTTTTTTCTTTAAAATGCTGTATTTTTCTCT
ACACTTTACTAGACTAGCAAAGGATCTCAAATCAAAAGCGAATTAGAAAT
AAATTTTCTTATCAAAAGTAAATTTAGTAAGATCTAACGTGGACATAGGA
AACATAGTTAGCGTCCGTATTTGAGACTTAGACGGTTGGGTTTACGAAGT
TTTCACGGGGAAGTTAAAGACGCCCATTTCGAAAAAAATGGTGATAGTGG
TCTGGGAAAATTAACTGAAACTTTTTTCTGATAATTAAAATTCATATAAT
TTCAGAGTGCAGTTGAAGCAATTAGGAAATTACACACGTACAAACCGGAA
GCTACATGGCTATTATTAAACTCATTTGCAACACAACCAGAGATGATTGA
ACCACCGAAGCTGATATTCCCAAAGATTAAATTCTCAGAAGATGCAATGA
AAAGGAATGTTTATTCAGACAATGTCAGCAGAATTCTTATGGGTAAAGGT
GATTAACTTTTGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008635TCONS_00008635Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:670353..673916 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.37	7.76	11.18	13.96	3.53	4.14	3.69	5.46	3.27	2.63	1.84	1.61	2.01	3.38	4.61	5.31	5.52	5.62	2.3	2.35	3.51	3.42	10.86	11.29	4.87	6.62	0.9	1.33	7.44	9.52