XLOC_004904 (gene) - C. hemisphaerica

Overview
NameXLOC_004904
Unique NameXLOC_004904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:608080..615208+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004904 ID=XLOC_004904|Name=XLOC_004904|organism=Clytia hemisphaerica|type=gene|length=7129bp|location=Sequence derived from alignment at sc0000087:608080..615208+ (Clytia hemisphaerica)
cctacatagcccatgacCAATATACTCGTCAttgacattggcacttaaag ggttaagtgatttcatttaataattaaatttcatttcttttaagatgttg aaaacagaaaaaataataagataATATTTTAAGACAATGTCTGACGTCAG CGAACATGATTCCGACAGCGACacagaaattcttaaaaaagaagaacaat cTAATAAACAACAACTGAAGACCCATGTCATCTCAAGTGGACCACAAATT ATAAATGCGCCTCAAGGTATAAAATAATTATGCAAGTATCAAAAAAGTGT caagtatttttcaaaattttgaaaattgaaaaatgagaaattttataaaa attatataatggtttcgtttttcattttatgaTACTATTAATCATTATTT TTAGATCTCTTCAGGTATTTCCTTTTGATGGTTATCTCACTATTCTATTT CTTTGGGTTTTTGCCAAACAACAACTTGCAtatattgtttttaaatatag taaatcaaaatgataaaaaatcacATTCTTCTTCACCGTTCAACATGGTC TGATATACAGCGACTAAATATATTTTTACTGATTATCATACCTACCTGGA CAGTGCCACACAATGTCAGCTCTtccaaattttatcattttagaaTGTGA TTTAAAGCTTCTTTCATTATATCTTTACTTAGTATATACGCAACCCTCAG AGACACCAACATCGACAATAACAACAGAAAAAACTGAAAGTGCTGGCAGT GCTGCGGATGGCAATGTGTTGGATGAATTGAAACATCAAGCTGAAAGTGC TGTTGCCGATCAAGAAAAACCTGAATGGCAAAAATACTTGGATCAAAACC AACAAACAGGTATAATAacaaaattttattaatttgacATCCATCACCCA CTTTCAGGACCCCATGCCATAAATTGGGATGTTGAGGGGCAACCAACCTT TTTCTTTAAACTTTATTTTGAGAATTAGCACCACTTTTTGCCAATAAAAT GAGcacataaaatttgtgaaattcACCCGTAATTCATCATCGCAAAAATT GAGCTCCCTTGGGTATTTTCTATGTTAAAAGATAATGGTTGTTATTATTT CCTATGGAAATAGGAGATGACTCCATGCTCTTctaaaaaattttagaaaa aaaaagctCGAGACAGAGTACGGAGGTCAACCTTAATATAGTGATCAGGT TTTATTGAGACGATGCACGTCATCTTTGAAATTGGAGAGTTTGCTTCTTT GCTTTGTTGAGGTTTTTTTCATGGTTTCTCGTCGTAATATACAAGGAAAA ACCACTCTTCCACACAGGATGGAATGAAAAGAATTGTAAAAGAAGGAAAA GTAATGAAAAATGTTACTTTGTCAATTTGTTTACAAACTTATACGGCATG AAATCTAAAAATAAGTAGGGCACAGTGTTGAAAAACTTACCCTAATAGAG GTGTTTAGttaaaaagatttataaaaatcgtatgaaatcaagaaattgtt taaaaaactGAGGACGGATGTGTCTGCCATTCGTCCGCCTGTAGACTTGC TGACGATTTTGGGTGACAGCATTGGATTGTCTAATGTTGTGGTTCATCAA CCTCTTCAATTTGTATTCGAGTTGCCGAATTCCAGCCGGTTTGAGCGTCT ACATTCCCGTAACCATTGCAATTTCCAACATTGAGAGCCACGTTGATTAT GTTGCTTTTCGAGATCTTGCAATGTCCAGTGATAACTTGTGGTCGATGTT GATTCTTATATCTGTTACCGGTCCCTTCATGCATGTAAACTATACCGTCT ATCGGCACAGGTGCACATTCATGTCCATCGAAAGTGACAAACCAACGTTT GCAACATTGATTACAATTAGTGATTCTCATACCTGAGGATACGACGACTT TCATATAAGTCGAGGTTGAATTCTTTTTGAATGAGCAGCTCTAGAAAATT GATGGAAAAACCTTTGTTTTATTAATCAAAACTTTTAGTAACACCAGGTA ACACGCGTGCGCGTTGCGTTAGTTGATtgctctttttggacctaccccgg tggaggtcctataaattaacctttgtccgttcgtctgttcgttcgttatt agctttcctcatgattggctcgttagttttttcaNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttgcaaaaaaaatttt ttggctcaaaaaacgcatgtttatctataagaatcactattaataagcat acatcaatattcttagtcaaattactcaattctttttatgagatggatgt tttttttgctacgagggcttacttttgaagaatatgtgtgtttagacatt aaattttggctgcttggcgtgtttttatagaaaaactggccaaattcgat atttatttataagcacattatcaattacttaggtactTTTCTCGAGGTTG GCGCTTTCattctttgagattttttgcacaaagatgcattaAACACTCAA ATTTGTCGAAGCCCGATTTAAAAATTACTCAACTTTTTTTacgagataga tgtttttttgcttgcttgaatatgaaagaatatttaaagaacatgaaatt ttggtttctaaacgattttttataagaaacaaacgactacttttaataga tcgtcactatttgggttttgaatgattgtttaatagtcacgctcacgtag atatcaattatatatgtgttaaatgcataaccaggtaggtccataaaagt atcacttgtcttTTATAGTTTTCCGCCAAAtttggatttgttttattaGA TTATGTTCTTTAGCGATTTAATTTGAATTGTAACATTTTCCAGTCTCTGA AGCTATCTTACGAGCTATTAAAGAAGCTTCTAATTACTTGTTACATCAGG AGATATAACAGTTTAAATTGTTTTAAGGGTTGTGAGAAAAAGAACGAAAT GATTTTCATATACCTACCTTCATCATGGCTTGTGTCAGGGTCAGTATTGC CAAAAGAGTAATAACCAAAATAATTTGCCTCATTGTGAATTTAACACCTA AGCTTTATATATGTTTTATAAAAGTCGCCTGTGTCCTGCCTACCGTTCCT TTTAAAAGCTCGTAATGAAGTTTGGCTGGCAGAGGCAGCCTATTTAAAGA TTCAAGGCAGTCTAGATTCAAGTGGTAGTGGGTCAGATtaagattgtttt gtttttactttacgCCAACGAGTCATAACCAGTACGATAAACGAACTATT TTAGGATGTTTGTCGTTTTTTCAAGAAGCTGGGTATCtggaatcaaaaca aacacttAGAAACTTCTCTTTCGAGTAAAAAATAACACTACTTCTGGCTT ATTGATAATACTGTAGTGCAATGAAAACTCGAATGTTTTTAGGATCAGTG ACaaaaataaggatttttttaatgtttagtTTTAACGGTCTTTGCAAGCT TCAAGACGCTTTTAGAAGGAAGCCTTTATATTGAAGAGGGCAAAAAAGAC ATataccgtaaatcctcgaataagcgccccgctcgaataagcgccccccc cTTTTAGTTAAAATGATATTATAAGCGCCCCGCTGGAATTAGCGCCccct ttgaataagcgccctctccagggaggggcgcttatttgaatattgttatt gattgaataaAATATTGAGTAGATACCtgtgtcttaaaaagaaagaaagc gacTAAGAATAAAATGAGagaaattgtcaattggatttttccaatttttc ttttattcatcctattttgaaaaatcaaccctttgaaacagttaagttta agcagattccgaatttgttgatatacgaatttctgaaataaaaaaataag cgcctcgcttgaataagtgccccgcttgaataagcgccccgcttgaataa gcgcccccccccccttagagcctgaaaaattaaataagcgcccgggcgtA TTTGAGGATTTACGGTAtccagattttttgcacagggCTTAGAAAAATCT TGTGCAGGAAATGGTCCTTTCACATGTCCATTTTCATTTCCGggacattt ttcaaatagtaATTCCTATgaactcaattttcgagaaaaaagaGTCACCA GATCCGGAAAATAGTCccttagaatttcttttcttaGTTTTACTACCAGG TACTACCACTCTCCAATTCTCTCAAAATTCACAGGTTTGAGTAAGTTTAG TCATTACTCAAACctcaaaaaattgtaaaaaagtattGGAGTTGGCCGAA TAAATAAAAGTGGTATATATGTTCAAAAAGGCACATCTTTCTTtatcata aaaaaaaagaatatctaaaaaactttttcttcatttttcaccaGGAGCGT ACACTTACACGGATCCAAATGATGGGACTGTTTATGAATGGGATGAGACA AAACGGGGATGGATCCCAAAGGTACGTTGATTGATAGATTTCACATTAAA taagtaaaaataaattttttggcgttatttacacTTTTAAAAGTTCTTTC GTCTTAGACGGATTTCTGTTTCCGCGTATATAAAGAGGCTTTCCTGTCTC TGCGTAATTCACCAAAGTTTCAAGATTGTGCactaatttgctgtgtaaaa tctaTTTTCCGTCCCAGACGAAAAACTTTGCTTTGACGCTTTGACCACTG TAAGAGCCTAATCAGTGAAGGTACAAAATTGATCAGTGACGGTTTAGTTT AAAGAGACCGGCGTCTATTACTTATCACCGATAAGGTACGAGAAATCCCA TTATTAAATTCATGAGGTTTTCAATCTTCTCCATATCTTCCTTTTAAAGA TCGACGAAGATTTCATAGCGATGTATCAAGCGAATTATGGGTTCACTGCG ACAGGTGAACATGATCCTAATGTCAATGCAGAAACAGATGAAAAACCTGG AGCTGGAGACGAAAAGAATACAGATGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008748TCONS_00008748Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008748-proteinTCONS_00008748-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:608080..615208 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.2 21.16 21.69 17.67 10.83 9.01 6.74 5.48 5.94 7.46 5.22 4.69 3.38 2.19 5.85 7.28 16.71 9.26 1.45 3.11 5.61 4.79 10.74 10.66 1.22 2.41 4.04 2.65 9.52 10.29