XLOC_004909 (gene) - C. hemisphaerica

Overview
NameXLOC_004909
Unique NameXLOC_004909
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:98030..102592-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004909 ID=XLOC_004909|Name=XLOC_004909|organism=Clytia hemisphaerica|type=gene|length=4563bp|location=Sequence derived from alignment at sc0000087:98030..102592- (Clytia hemisphaerica)
ATCATCCGCACATACCCAGCATCTGTTTATGTTTTTTAAGTACCCCTTCG GGATTCCTTCCCTATTTTTCCTCATTTTTCTATGTCTTTTTTATTTTTCA GATTTTAAATAATAAAAAAAAAGAAACAATATTATGAAATCCAGAATCTG GTTTATGCTTTTTGGACTTGCATCTACTGTCGCCCTCTTGGTGAACAAGT ATGTCCTCTGGAAATTGAAATTCACTTATCCAACAGTCTATCAAAGCTGG CAAATGTCTTTCGCATCTGTGATGTTCTTCTCGGCTCACATGTTTGGTAA AATGCCTTCCAAAGCTTTAAATAGTGGAATTATTTATCCCTGGTTTCCAG CCATACTTCTTTTCTCTACCAGTATTTATAGTGGTTCAGTAAGTCTATCA CGGCTGCCTATCCCTGTTTTTTTATTTTTGCAACAAGGGGTTTTACAAAG CATAATAGTATTGATGAAATTTCAACAACAAAATGGACCTGAAAAGTTGG TATCCCTTTTAATGAATTCAAAGAAAGGTTTATTAATGATAGTTAATTGT TTTTGTATTGTTGGCATAATTTTTCTAATGAAAACTGAACTGGTATTCAA TTTTAAGTGGATGTTGATACACTGTATAGCAAGTTGCAGTTATTCGGTGT TTGCCATCAGACATCAACATTTAGAACTTCAAGAATCGGATAAACTTCTG ATCAACTCTATATTCAGCATAATAGTGTTGTTAACAGTTGGCATGACTAC TGGGGAAACGAGCGTCGTCTTTAAATTTCCGTTTTTATATCACCGTATAT TTTTGTTGGCTTGTCTTTGTAGTGGAGTATTTGGTGCACTTCTTATGGTC AGTTATTCTAAGCTATGTAGCGAACTCAAGATCGAAAAAGTACGATTTGG GAATACTATAATCATGTTATGGGTGTCCGGTATATCCTTTTTTGTTTTTG AGAATGAATTGACTGCTCAATTGACATTCTTGGCTTTCTTTGGACTGTGC TCTACTTGTTACTTGTGTTATTTGATTCAAAATGAATTGCAGCAACAATC TACACCTATTCCTATAAAGGAAATTGTTATATGATGGTGGTTTTGTAATT ATTTCTTTAAATATTAGTTTTTCTATTCAACCCTATTATAGTTTTGCCTA CTAAAAGAGCCTCGAATTCAAATTTTGACTAGTTTTTTGACTAGTTTTGC TCTTCTATCTTTGTAGGTATCCAGTAACTTAGTTTACTATTAAAATTCTT ATCTTTAAAACTAGATCAGCTATATTGATGGAATTTTCAGGGAATGCTCC AAATAGGTTATTGGTTGAGTACACCTGTATAGTTTAAAGAGGGGACTTTA ACGAGTATAATCTAGCAAAAAAAAATCTACATCCAATTTCAATTTAAGAG GCTTTTTTGGCACACCCTGGTAATCTATAATTATTAGCTGTAGCTATAAA TATTATAAGGTAGTTGGTTTTATACAACCATTGCCCTGGAAAGTTTAAAA CAAAAACTGAAACTTTGATTGAATATTTTTGTTGTTTTTCCTACGCCAGG ATTATGGAACTTTTTTAGAAATAGCATTCAACACAACTTGTATTAATATC ATCAAGATAGTGTATTTATTTTTGGAAATTATTTATTATTTATTAAATCC ATTTTTCAGATCATTTTTCTTCTAGTAGGGAGAATTCTGTTTCACTAGCT ACCTGGGGAAGGGGCACTGGATTTAAGAACGATCGTATGCGCGACTCAAA ATTATTCCTTTAAAACGGACCCACTATGCCTCGTAACAAAGTGAAATTTT TCAAAGATCATTTACTATGACATAAAAATTCGTTCATTTTCCAGCTTTTT TACTTGAGTTTAGACCCCTTTTCAGAGTTTTAGAACTATTCCTTACCATT ATACCAAATTTTTCATTTGTTTTAAAACGCAATTAAAATAATGGTTTTCG TCTAAACAGCCTACATCACTTTATGCAGCTTAAAAATAGCCTGAATCATG GTCAGCATGTTTCACCAGGGTCAACGCCATGGTCTGGAAACAGGAGGGGC AGAAAATATAATGAATACTTAGGTGCAACCATCGCTTTTGAAAGTATGAA TTGTAATATCGCAAAAAAACTTTCTTTAAAAAAATGAGGTGGCTTTGACC CCCATGGGTCCCGCCAAAAGTTGGTTTGTTTGGTGTCTTTTTTTGAACTA TTTTAAGTCTATCCACGAAAATGTCAGCTTGTTATAATGAGAACTAATAT AAGTATTTCCATCAATTTGCGTTGTTTTTGTTTACAGATTTTGACTTAAC ATACTTTTCCTTTCTTCTCGTTTACAGATGGAAATATCAAAAGAATTATT AACAGGTTTCCCATTGCGTCGACATAAATTACCTACGGATCCTTTCTTCG ACGATGGAAACCAAATATTTAGTTTCCATGAAAAGACTGTGAACTCTGAT ATTGATTTCTTGGTAGATTCCATCTCAGCTGTTCATATTGAAGAGTTTGG ATGTTCTGTTAAGGGTTGTCGGGAGACTTTTACAGATCCAATGCAATATA ATCGACATTATGATATGCTTCATCGATACAGCTGTGAAACTTGTCACCGT AATTTCTCATCCAATCATTTGCTATCACTGCATATAAGTGAAAGTCACGA TGCTTTCTTTAAAGCACAAAGAGATAAAGGCATTGCTGTTTTTCATTGTC TGATCGAATCTTGTGGAAGATCTTTTAAAGCTGTTGAAACGAGGAGACGA CATTTAGTTGAAAAGCATAAATATCCACCTGACTTTCGTTTCAATATGGC TAGAAGACCACACCAGAAATATCAGAAGAATAAGAAATCGAACAATACAA ATTCTTCCAACGGGAATGTTCTAATTGAGGCTGAATCTGATGTAACAATG GAAATGGAATATGAATCTAAAAAAACGAAGACAAAACCTAAAACCCAACA GCAAGATTCTTCTGGGAAAGCAACTGATATCCAAATGGTCGATCATGCAA TTGGTATGTGTGTTGAATCTGGAGAAATCGACATTGGAAATCGACATTCG GATTCCACTGGTGAGGGAAGTAACACACAAAATAAAAAACCGAAACCTAA AAATAAAAACAGAAAACAGAAAGGGAAAGGACATAAAAAACTCCCTAAAG ATGAAAAAATAACCATAGATTTTCCTGCTGTCGAGGATAAAGTCACTACC TTGTCAAATGAAAAGCCAAAAGAATTAAAGACAGCACATAGAATTGACGA CACCTCAAGTAAAGAACCATCAAGTAATCTACCAATGGATAAAGACGTTG ATTCAGTGCCTTGTAAGCAAGAATTGAAAGAGGCAGGAACTACTAGTTTC ACTATGAACACAAAAATGGTTCCTCGCTCAGTATCTTTTGGTAGATACCG GATGACCACTAAAGGATTAACGAAGTGATTCTTTAGAATCCCAATCAGTA GCGTGGTAGCTTGGCAAACACCGGGGAGAAAAATGACGTGCTCGAAGCGA GCGCGAAAATATTTCGACATTTCACCATTTTCTAGGGTTAGAAACTGCCA TTTGTGAGGTAAAAAAGGGAAAGGGGCGCTGAAATCAGTGTTTTGAAGAG CCTTTTTACGCCCCTTATTTTCTCCCCCCAACCTGTCACCACGCTAGTGA TCCCAATAAAATTATTTCAGAAATAAGTGTTAAATAGAAAAATAGAAAAA TTACTTATTCTGTATTTGTTACTTTTTTTAGAATTTATTTTGTGGTAAAT ATAATGATATGATTTTTTAAAATCTATTTACGTTTTCACCTGCAACTACT GGCCTAGAAATGCTGAAATAATACTTTTTCAGTATTTTAACTCTAGGAGT TTTTTTTAAAGAGTCGATCTTTCGACAATCCAAGTCAATTCAATTATGAG AATAACAATGGAATCTGTTGTATTTGTAGATTTTTACAATCGGTTTTTAA TTGAACTACTGTGGACCATTTTTCATTCTTTGAGTCATTCTTCCATTTAG ATCTCAATCATATAAAAATATGTTGCTTTCAATCATCTCAAATTCTTTAT CTCGTTTAGTTGAAAATGAACAGATTCCATCATCAAGAGGTCGCTGCTGT ACCATCATCATCACCATCAGAGTTGTCAGCAACAACAATCAAAGGCGTCA TTTCAATTCCACCATTTTGAACTGGTCTCATATCACCATTGCTGCCTAAA TTCACTTTACTTCCTTTCACATTTTCATTATCATCGACAGGTAGCTCCTG GCTTCCTTTTATCACACCATCACTACTTTTGGCGCTTATACTATGATAGC TGTGCCGTACACTAGACGGTGTTTGTCTTCCTGAAATATATGACGTCATT TGAGGAATTCCGTCACCGGAGATGACGTCATCACTAGGATGTCGTTGGTT GAGATCGTAAAGTCGTTTGTTGCCACGGATACTGTCGTGATGTCGCTCCC CGTCGTCCTCGAAATCGTCATCGGTATAAACATCAATACATGTCGACTCC TGTGAAAAGAAAAGTAAGATTGTATGTGTTATATTGTCACACATTTACCA CTCGACTTTAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008760TCONS_00008760Clytia hemisphaericatranscript
TCONS_00008759TCONS_00008759Clytia hemisphaericatranscript
TCONS_00008758TCONS_00008758Clytia hemisphaericatranscript
TCONS_00008757TCONS_00008757Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:98030..102592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.05 25.44 11.96 10.1 4.5 4.65 4.71 4.98 2.89 3.1 4.69 2.76 2.22 1.95 1.45 3.54 2.11 2.17 1.56 3.43 2.07 3.16 24.26 17.37 3.62 5.15 4.99 5.29 14.62 17.53