XLOC_004915 (gene) - C. hemisphaerica

Overview
NameXLOC_004915
Unique NameXLOC_004915
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:188575..196740-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004915 ID=XLOC_004915|Name=XLOC_004915|organism=Clytia hemisphaerica|type=gene|length=8166bp|location=Sequence derived from alignment at sc0000087:188575..196740- (Clytia hemisphaerica)
AAAAAAAAACACATCAAACTCATGGTGGGATGACGAAAATGATGAAATTA TTCCTGGAAGTTTGACACAAAAAGATAAAGGTGAACTTTTTTATTTCTGA ATTCATTTTTGACTTCTTTGAAAAATGTCATTCTTTCCCACGGAATGACG TCACACGAGGGGGGAGAGATCGAACATACTCAAATAAAAACAAACAATTT ATCAACAAAATCATTTTAGTGAGTTAGAACACAGTGTTTGTTTTCCCCTC GAAATCCAGAAAATCTATTGGCTAAAACACAAGTCACATGACTATCCGTG GCAAAGAATAGTCTGCTAATAATATATGGTCAACAAGTTTCTGAAATAGT TTTAAATCTACTTTCCTGTACGTGAGTTTTACTTGCTTAAAACTGTTTGG ATGCCTTACACCTGTGAAACGTAGGCTAAATCACATTTCCTTCGTTCGGA ACTTCCCTTTTTTGGTACTTTGGTATTTCTTGTTGTTTTTCGTAATGAGG CTATGAAACTCTTTTAAACGGAATAAACAAATTTTATAACCTCGAACGCT TGCGAATAATTTTTCAAGGAAGTTTATTTTACTTTCTATATTTCCTTATT TCCTTGTGAAAGTTTGTTTGGTTATCAGTTGTATATTTATCAAAGGCTCA GTTCAGTGTTAATGTCGTCTGATCGACGTTTTATTATTACTTCTCTAGTG GCTATAGAACGGAAGTTTGCATGTTGTTGTTTTAAAGAGATCTTATCTTA TATACGAAGGTATACTTGCCAATAAATTTTTCCTTTACTCTAAACTCTGA TATTTTACAAAGACAGCTCCTCAACCTTTCCTTCATTAAAAGAATGTTTT AAATAATGATTCTTTTCAAATTGTGCTTATAAAAAGAATTAGAGGACCCA TCATAAGTTTTGTCTCTTTTATCCAATTAATTAAATAAACTATTTTCCGA CTCGCTTGGCCAAACAAAACATCAGACGAGATTCTCTCGCGCCACTTTAA GAACACGCGTGGTGAAGTCTAAAGGTCGAGCTTCCTCATTTTGTTGCTAT GACAGTTAATTTGTGATTGCTCCACGTTTCTGTCTATTTTAACACTTCAA TATTGTCACAAGGTTATCTCTTGTTTTCAAAAATGTTTTTTATGTGCAAT CGTTTTTCACTGTGTAAAGAAATGAACTTTGGTTTCTGAGAGAGAGTTTT AAAGAGTAGGTTGAAAGGTTTTTCGCTGATAATAAATAGACTGATAAAAT AATTTTTATAAATTTTTCTTGGATTTTAACATCTCTTTCATTGTCTCGGC CACAGCCATTTTCGAGTTTTAAGTAGTCGAGTTTTATGCATCATGTTATG TGCTAATTATGCTTCCTTTCGCAAAGGAACAAAATTTTTCCCTGGCTTTA TTTTGTTTCCTTTTTCAACTCTTTTACTTTAGATAGTTTTTGTGTTCTTT ATCTATCTTTATTTTAGTGAGTGAATGAAATCTAATCAAGTTTATCTTCA GGCTTGTTTGTTTATTACCTTAGATTTTTATTTTGAATATTTAGTAGCCC CAGGTAGCCCTGCTATCTGAAAAAGATCTTTATATTTACAATCCTTCCTC TATATGTTTAGAATCCTTGGTTAGAAAATTTTGAGAGCTTTTGGCACACG TTCGCTAAGTTTGGTTCAATTTTAGATTCACACATATGTCAAGTTTTTCT TCTCTTAGTTGCTCAGAGATGTCTTTATAGAATGACCCACAAAATGTTGA CTTTTTAATGAATGCATCGTTTGAGCCTTGTTGTTGTTGCTTAGCAACTT TATTTTGTTAATGGGGTTTAAATGATAACCTCCCTAATTACACTTGAATA TAATGAGTGAGGCTGTTATCTTAAACCTGTCCTACATATGCAATGTTAAA GAATTCCTGTTCACTGTTCAGTAGTTACGAAGATAAGTGTATAGCTGATC ACGCCACTTTTTACAAAGATTTGCACTCAAACGAGTTCGGACAAAGGAGT TTAGTAGAGTTCTTTGTACATATGTGAGTTGTTCTGTGTCAAACTATATG GTCCAAGCAGCTTTTCGTTGGGACCCCATTTTACAAAATGGAAGTAAAAA CTTTGAATTGATTGAGGGCTTACTAGCTGATGTCTCTTCAACATAAATAT AGGTAGTCTTAAACGATTATCCTGTAGAATTTAGAAAAGCAGAGAAACGA GAGAGCTTCAAATTTCAAGACAATATGGTTTTCCATGTTTTGGGTTTTGT ATTCTATTGAAAAGTTCAATATTTAAAGTACGTAAAGTAAAAATGTAATG AAAAGTTTTTTATGTCCTTTCACAGTGTTTTTGGAAGTTTTAAATTATAT GTCATTTGCTTTACTATAGTAGCCATCAATTTGAACTGACTGGTTTTCTA TCACTAGCTCAACTTTTGTATGGAGGGTTATTGAACGTATTTTTTCCTCT ATAATTATTCCTGCTAAGGACTTGACTGAAAAAATTGTTTAAGAAACTTG GAAAGGATAGTTTATCACCAGAACTAGTTGTCAAAAAGCCTTTGCAGCTA AAATTCACTCTTCAAAAAGTTTGAGTTTCAAATATTTTTGATAAATGAAT GATGAAGTTTTTAGCTTGGGTCACTTTCAATGCACTTTCCGGGAATTACG AAATACGTCATTACATCACACTTTTTATCAACAAAAACATTGACTAAACC TCTACTTTGTTTATGTTAAGATTGCAAGATATATCAATGGTTTTTATAAG AAAAGGACGTTCTTCTTTATCCATAAGATCAGCGGGCGAGTTTTCTTAGG TGCCAAATAAACGGGGCCCCCCGCTTGTTAATTTTTCGAAAATTTTCCAA CCCCCACATTTTATTAGGACCCCCCCCCGTATACTGATTTAAAAAAAATT TTCAGCTGTCAAAAGGGAAGGCCTCTCATTTTGCTCTAAATAGCCTGATT TTAGCCTATATTTACCTTATTTTACCTTATTTTTGGGTTTTCAGAAGTAC AATTTCCAACTCCCCCGGCAATTAGGTCCCCCCGTTTATTGAAATCTCAA AAATTTTCCAACCCCTAGTTTATTCCAACCCCCCGTTTATTTGGCACCTA AGAGTATTACATTACAAAAATAGAAGGCTATAATGCCTTACCTCAAAACC CGACCAATACAAATGCTGTTCCAGTGTTGAAATTCTTTTGAGGAGTTTAC TCTTTGACCTCCTTAGAAACAGCTAGAAAAGTATCAAAAGCATCGATGTT CTTATAATGGCCTTATTTTGATACGGTTTACTTTCATGCAGAGGCATGGA TGTAAAATTATTTCTTCGTTAGGTTGAAAACTAAAAAGTTTATTGTGAAG TAGTCACACTTTTTTTATCAAACCTGAAGTGGATTTGTTCAATGCTAGGT CGTTATTGTTGCTGTAATTCTGATCTCTAAGGCCTTTCATTTTATCTGTA GTAAAAAAGATTCATTTTAAGTATCTTAAAATAGTTTTTCAACCTCAACC AACATCAAGTGAAATTCTTAGATTTTTCGTTTGTTAAATCCGTCACGAAA TTTTAGTTTGGGCTCAGTGGTGGTTTGTCGTGATGAGATAGATAGAAAAT TTACATCCAAATTGAACGTTCTCTTATAATAGTAATTCCAATCTTGTTAC CTTAACCCAAATAATCCACAGAACTTTGTCGTACTGACGATCGGGTTTCG CTTATTTTTAAGATTTGAATTTTGAAGTCGATTGCGAATCTTCTAACTTC AGATTTCTCAGTTTTGTTTTCTTTTGATTTTTCAGGATTTAAATTGTTTG TGAAGAAGAGAAGAACACGTTACTAGATTATAAATGATGAATTCTGACAT TGTGGAACAAGAAGTCCATTGGTTTTGGACTGAAAGCTTTTGGTTACCTC CTGGAAGAACATGGAAAGATTATGAATCCACTGACACACTCACTAAAGCA AATTTCCGAGATTTATACTTTATACCGATATATGTCATTATGTTGACGTG CGTCCGATTTCTATTCGAAAGATATATAGCAAAACCATTTTGTGTATATC TTGGAATTGAAAACAAGACCTTTGAACGCAATAAACTTTGTGAATTGGTT TACGATACGGTCACTAAGTATCCAAAAACAAAGGAATATGAAGCCATTGC CAAGGAGACTGGCATGACCACAAGTGAAGTGAATTCTTGGTTTCGACGCC GCAGAGCAAGTTCTAAGAACTCCAAAATGAACAAAGCTACTGAGACCTGC TGGAGAGCCTTTGTTTACTTATTACTATTCATCTACGGGCTTTTAATACT GGCTAAAAGTGATTGGTTTATGGATCACTCCACTTGGCTACCAGGCTATA TCAATCATCCTTTTACAATCGAATTGAAAGTATACTATTTCGCTGAGATC TCATTCTACTTTTCACTCCTTTTCTCGCAATTTTACGACACAAAACGTAA AGATTTCCTACAGCAGTTTATCCACCACGTAGTCACCCTCACACTTTTAC TGGGTTCGTTTCTCCTATCAGCATACCGTTTTGGAGCTATCATCATGTTT ATACACGATACAGCAGACTTTTGGTTAGAATCTGCTAAACTAACAAATTA CGCTAAACTACAAAAAGTTTGCGATGTGTTATTTGGTATTTTTGCCATCT TATTTTTTGTTACGAGACTCATTTATTACCCTGGATGGGTAGCATACGCA TTCTTCCATTATAACAATGAAAGTAAAGGTATTGTTTTTAATACTTTAGT TTGCCTCTGTTTCGTACTGTTATTCTTGAACTTTTATTGGGGATTTTTGG TCTTGAAATTGGCATACAAAGTACTGTTTTCTGGTAAAGGAGCCTCAGAT ACTAGAAGTGATACCGAAGATTCCAGTGGTAGTGAGGATTGATGGATATC ATTTGTATTGAATGCTTAGAATTAAATGCGATGTTAGAAACTTTTTTTTA CTATAAATGATTATCATTATAGATGCTACAAACTTTGGAATTCTGGTGTT TTGTGGTTAGTTTTTTTTTTAATTACTGGTCTTTTGTCCGGACAATCTGT AGAATCTGCCTCATTTTTTTAAGTTGAGGCACACAAACATTTTTACATCT TTAACACTAGTTCAATGACTGTGGCGTAATAAAATGGGATGGAATTTATT GTAGAGGTCACATTGGAGGCTCAACACCCCTTGATTCTTGAAGGGTTTCT CGAAAACGCCTTGAATTTGACAACCGACTCCGCCGGAACTACTTTTTAGA GTCAGACCTCTGGCTTCATTTTCTTCAACAACTTTCTCTTAGGCTAAGAA CCCAATTTTTCTACTATACAAAACGTTTTTGAATATGACTCACTATCAAG CTTGAATTGTAACACAGTAGTGTTCTTCCATCTTACGTTTTTTTTTATAT TGCAAACTTATAATATATATCCAAGTTTGAATTTATACAACAGAACAAAT TATATTCACGGCCTTTCACACAATCTTCCTCATAACACACAGATTAGACA CCTCCTTCTGACAGACCCGGTGGGGCCCCCTCCCACTGGAAGAATTGGCC AAAATAACGTCCCCAGTGGATGATTTTACTCCAATTTTTGTCGCCGTTGG AAAAATAAAAAAAGCAAATCCTCGCACTGCAAGATATCGATTTGAATATC CCTAGCTGAATTTTCTGACTTGAAAAAAATGGAATGCAAATCCCAAGCCA TAAAAAAAGATAAAAATTTCCCTATCGAGTTTCAGTCCGTTATTTTTACT CACTGGCTGAAAAAATCCTACCGGGTCTGTGAGGAAGGGGTGTCGGGTGT AATTGCATTGGGATTTGAATACATATTTGCGGGACCCGCGTGGTTTTCAC ACAAATGCTAGATAAATTTCTCGCGCACGAAACCTTTGAAAGTGTGCAAT GCAAAAATATACAAAGAAAGTGATTGATTTAATTACCGGTCTGAAATATG AAGCAAATCCTTAACATTTTTTCTTGCCTGAACATGGTTGAAGATTAGCT TCGGGCTATACTTTGCTTGTTTTTATAACCTCACTCGTCATACATTTTCA TTTTAAAGTAAGCTTAGTTTTCTTTTTCAAATTTTTAGTATTGATTTTTT TGGATTTTTGTCATAACATTTTTGAATTTTTTTTTTAAATTCTACAATAG AAATATTTTTTCGCGATATTCAACAGGCGAAATTTGATAAATTAATCAAA GCCACTAAAATTTAAATAGACGAAGACTCTCGTCTGGCTATTGGGTTTAG GTATCGAAAAACCATTTTGCCGGCCTATTTTATAATTGTAAAATTCACAG GTTGCAAAAGTCTGAAGACAAATCACGCTTTTACTCGAAATTTTAAGTGG TTGTTACATGACATTTATTTCATTTATATATATCAGCTGTAAGTTGTAAA GCAAGTAAAACATGGGAATAAAATCACGTGAACTTTTTCGAGTAATCACA TGTTTTGACTGCATTGATATAATTTTGCAACCCGTGTAAAGGAAAAACCG GAGACTTTGGATTTTATGGAAATGGAACAATATATTTTCACATTTAGTTG CGCCTCATACAGTCAGGGATAACTTCAAATTAGCCTACCATCTCGGAATA TCACCTAATTAGCCTAGAATAAGCTCATAATGAAGAAAAACTTGATTTTT GAGCCAAATACTAATAGTCGCATCCTATAAATCCTCAGATTAATCTCTAA TCACTCAATTAATGTATATTCCAAATATTACCTCTTAATCAGCTGCAGAA TAGGAGATATTCAATTTTTTCTAACTGCGCATGCGCCGAACATGCGCAGT ATAAAAGCTTTGACATTTTTCGCGGAAAATATTTTTTTGCACACGTTACT AAGATCAGAAAATTAGCCTATACATTTTTTCTGGGAGCTGAACACAAAAG ATTTTTAAGTGGAGAATGTTCTTTGAAACNATGCTATAATTTTGACCATT TTTTGCACGAAAGGGATCGAAAATTTTGGGGAAAATGCACTCTAAGGGTA TGATTTTCACTGATTTTTGCTGCACCGTAAGGGTCTAATTTTAAAAGCCA ATTTTCGGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCCGGGA TCTACTGCTAATTTCACTTCCATACGATTTGAAGCATCCCCACTGGAGTC TTATCCCAGGGGGGGGGGCACTCCAGGTAAGTGATCTACGGAACGCGCGG CCCTTAAGGGTTTGTTTTTTGGACTTTGGAAAGTGCACTGTAACTGTAAG GGTGTAAAATTTGAGAAAATACCAAATTTTGAGGTAAAATTTGAGAAATT TCAAAAAATTTCGAAAAATTGCACTATAATAGTCAGAAAATCTGCCGTAT ACTATCTTCGCTTTCTGATTTGAATTATGGCGCTGCGATTTCCCCCCATC AGAGAATTAGTAAAGGCAAAAAGTAGTTGAGCTCCAGCTCCTGGACTAGC ACTATAAGGGTCGATTTCCAGCCAAATTTTTCCTACACTGAAAGAGTGGT CCGATTTTAGAGACCTGATTTTTGGCCGAACGTACGGGTTGTTTTCAAAA TCGAGTGCCCAGCCCCCGGGAGTCTTATCCCCTTTTTATAGTGCTGTGCG AATTATTCTTGGAATTTTACAAATCGAACGTTTTTCGAATTCGAATGTTT TGAATTTGTTTTTATTTTTGTTGCTGCATTGCAAATGTGAGCATGAAAAA TTGAATGAAAGAGTTGAAAATGTAATTCGAAATGTAATTCTGGATAGATA TTCCCTACGATTACAAATTTGAAGATTAGAGTGCAATGAAATTTAGAAAT GCAGAATTGATTTTGTTTATTACTTCTGCAGGGTTATCATAATCGATGCA CAAAATGATGAAATAATGATAAAAAAGACGCTGTTTCCAAAAAAAATAGC GCGTCTAAAAGGCGGAGACAGAAGAGCAAGCATGTTTGGGCTCTGTTTTA CCAAAGAGTTTTCTGNTTGGCGCTCCAAAGTCATAGCTTGGAATACAACA ACACCGCGTGAACAGAAATTTAGCGTCTTTAGCGCTCCAAAGTCATAGCT TGGAATACAACAAAAAGCAAAAAACGAGGAAAAGGATAATTACAAGGTCT CAAAAGAAGGTTGTCTATTGCTCATTCCGACATTTTAAATTTTCCAGGGG TTTTGTTGTTTGGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008771TCONS_00008771Clytia hemisphaericatranscript
TCONS_00008770TCONS_00008770Clytia hemisphaericatranscript
TCONS_00008769TCONS_00008769Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008769-proteinTCONS_00008769-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:188575..196740 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CERS2PREDICTED: ceramide synthase 2 isoform X2 Homo Sapiens
CERS6ceramide synthase 6 isoform 1 Homo Sapiens
CERS5PREDICTED: ceramide synthase 5 isoform X2 Homo Sapiens
CERS3PREDICTED: ceramide synthase 3 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.81 8.51 4.17 3.54 28.84 22.92 54.73 55.59 19.39 21.57 31.66 19.63 12.69 13.63 11.17 16.06 14.98 15.18 14.7 14.36 15.81 13.88 17.45 15.66 15.96 20.57 13.22 7.71 15.86 13.08