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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008771 ID=TCONS_00008771|Name=TCONS_00008771|organism=Clytia hemisphaerica|type=transcript|length=4461bp
aaaaaaaaacacatcaaaCTCATGGTGGGATGACGAAAATGATGAAATTA
TTCCTGGAAGTTTGACACAAAAAGATAAAGgatttaaattgttTGTGAAG
AAGAGAAGAACACGTTACTAGATTATAAATGATGAATTCTGACATTGTGG
AACAAGAAGTCCATTGGTTTTGGACTGAAAGCTTTTGGTTACCTCCTGGA
AGAACATGGAAAGATTATGAATCCACTGACACACTCACTAAAGCAAATTT
CCGAGATTTATACTTTATACCGATATATGTCATTATGTTGACGTGCGTCC
GATTTCTATTCGAAAGATATATAGCAAAACCATTTTGTGTATATCTTGGA
ATTGAAAACAAGACCTTTGAACGCAATAAACTTTGTGAATTGGTTTACGA
TACGGTCACTAAGTAtccaaaaacaaaggaatatgAAGCCATTGCCAAGG
AGACTGGCATGACCACAAGTGAAGTGAATTCTTGGTTTCGACGCCGCAGA
GCAAGTTCTAAGAACTCCAAAATGAACAAAGCTACTGAGACCTGCTGGAG
AGCCTTTGTTTACTTATTACTATTCATCTACGGGCTTTTAATACTGGCTA
AAAGTGATTGGTTTATGGATCACTCCACTTGGCTACCAGGCTATATCAAT
CATCCTTTTACAATCGAATTGAAAGTATACTATTTCGCTGAGATCTCATT
CTACTTTTCACTCCTTTTCTCGCAATTTTACGACACAAAACGTAAAGATT
TCCTACAGCAGTTTATCCACCACGTAGTCACCCTCACACTTTTACTGGGT
TCGTTTCTCCTATCAGCATACCGTTTTGGAGCTATCATCATGTTTATACA
CGATACAGCAGACTTTTGGTTAGAATCTGCTAAACTAACAAATTACGCTA
AACTACAAAAAGTTTGCGATGTGTTATTTGGTATTTTTGCCATCTTATTT
TTTGTTACGAGACTCATTTATTACCCTGGATGGGTAGCATACGCATTCTT
CCATTATAACAATGAAAGTAAAGGTATTGTTTTTAATACTTTAGTTTGCC
TCTGTTTCGTACTGttattcttgaacttttattGGGGATTTTTGGTCTTG
AAATTGGCATACAAAGTACTGTTTTCTGGTAAAGGAGCCTCAGATACTAG
AAGTGATACCGAAGATTCCAGTGGTAGTGAGGATTGATGGATATCATTTG
TATTGAATGCTTAGAATTAAATGCGAtgttagaaacttttttttactata
aatGATTATCATTATAGATGCTACAAACTTTGGAATTCTGGTGTTTTGtg
gttagttttttttttaattactgGTCTTTTGTCCGGACAATCTGTAGAAT
CTGCCTCATTTTTTTAAGTTGAGGCACACAAACATTTTTACATCTTTAAC
ACTAGTTCAATGACTGTGGCGTAATAAAATGGGATGGAATTTATTGTAGA
GGTCACATTGGAGGCTCAACACCCCTTGATTCTTGAAGGGTTTCTCGAAA
ACGCCTTGAATTTGACAACCGACTCCGCCGGAACTACTTTTTAGAGTCAG
ACCTCTGGCTTCATTTTCTTCAACAACTTTCTCTTAGGCTAAGAACCCAA
TTTTTCTACTATACAAAACGTTTTTGAATATGACTCACTATCAAGCTTGA
ATTGTAACACAGTAGTGTTCTTCCATcttacgtttttttttatattgcaA
ACTTATAATATATATCCAAGTTTGAATTTATACAACAGAACAAATTATAT
TCACGGCCTTTCACACAATCTTCCTCATAACACACAGATTAGACACCTCC
TTCTGACAGACCCGGTGGGGCCCCCTCCCACTGGAAGAATTGGCCAAAAT
AACGTCCCCAGTGGATGATtttactccaatttttgtcgccgttggaaaaa
taaaaaaagcaaatcCTCGCACTGCAAGATATCGATTTGAATATCCCTag
ctgaattttctgacttgaaaaaaatggaatgcaaatcccaagccataaaa
aaagataaaaatttccctatcgagtttcagtccgttatttttactcactg
gctgaaaaaatcctaccgggtctgtgaggaAGGGGTGTCGGGTGTAATTG
CATTGGGATTTGAATACATATTTGCGggacccgcgtggttttcacacaaa
tgcTAGATAAATTTCTCGCGCACGAAACCTTTGAAAGTGTGCAATgcaaa
aatatacaaagaaaGTGATTGATTTAATTACCGGTCTGAAATATGAAGCA
AATCCTTAacattttttcttgcctgaaCATGGTTGAAGATTAGCTTCGGG
CTAtactttgcttgtttttataacCTCACTCGTCatacattttcatttta
aagtaagcttagttttctttttcaaatttttagtattgatttttttggat
ttttgtcataacatttttgaattttttttttaaattctacaatagaaata
ttttttcgcgATATTCAACAGGCGAAATTTGATAAATTAATCAAAGCCAC
TAAAATTTAAATAGACGAAGACTCTCGTCTGGCTATTGGGTTTAGGTATC
GAAAAACCATTTTGCCGGCCTATTTTATAATTGTAAAATTCACAGGTTGc
aaaagtctgaagacaaatcacgcttttactcgaaattttaagtggttgtt
acatgacatttatttcatttatatatatcagctgtaagttgtaaagcaag
taaaacatgggaataaaatcacgtgaactttttcgagtaatcacatgttt
tgactgcattgatataattttgcaacccgtgtaaaGGAAAAACCGGAGAC
TTTGGATTTTATGGAAATGGAACAATATATTTTCACATTTAGTTGCGCCT
CATACAGTCAGGGataacttcaaattagcctacCATCTCGGAATATCACC
TAATTAGCCTAGAATAAGCTCATAAtgaagaaaaacttgatttttgagcc
aaatacTAATAGTCGCATCCTATAAATCCTCAGATTAATCTCTAATCACT
CAATTAATGTATATTCCAAATATTACCTCTTAATCAGCTGCAGAATagga
gatattcaattttttctaacTGCGCATGCGCCGAACATGCGCAGTATAAA
AGCTTTGACATTTTTcgcggaaaatatttttttgcacacgTTACTaagat
cagaaaattagcctataCATTTTTTCTGGGAGCTgaacacaaaagatttt
taagtggAGAATGTTCTTTGAAACNATGCtataattttgaccattttttg
cacgaaagggatcgaaaattttggggaaaatgcactctaagggtatgatt
ttcactgatttttgctgcaccgtaagggtctaattttaaaagccaatttt
cggcccgcacataccgtcagtccgcaaacccagtgccccccggGATCTAC
TGCTAATTTCACTTCCATACGATTTGAAGCATCCCCACTGGAGTCTTatc
ccaggggggggggcactccaggtaagtgatCTACGGAACGCGCGGCCCTT
AAGGGtttgttttttggactttggaaagtgcactgtaactgtaagggtgt
aaaatttgagaaaataccaaattttgaggtaaaatttgagaaatttcaaa
aaatttcgaaaaattgcactataatagtcagaaaatctgccgtatactat
cttcgctttctgatttgaattaTGGCGCTGCGATTTCCCCCCATCAGAGA
ATtagtaaaggcaaaaagtagttgagctccagctcctggactagcactat
aagggtcgatttccagccaaatttttcctacACTGAAAGAGtggtccgat
tttagagacctgatttttggccgaacgtacgggttgttttcaaaatcgag
tgcccaGCCCCCGGGAGTCTTATCCCCTTTTTATAGTGCTGTGCGAATTA
TTCTTGGAATTTTACAAATCGAACGTTTTtcgaattcgaatgttttgaat
ttgtttttatttttgttgctgCATTGCAAATGTGagcatgaaaaattgaa
tgaaagaGTTGAAAATGTAATTCGAAATGTAATTCTGGATAGATATTCCC
TACGATTACAAATTTGAAGATTAGAGTGCAATGAAATTTAGAAATGCAGA
ATTGATTTTGTTTATTACTTCTGCAGGGTTATCATAATCGATgcacaaaa
tgatgaaataatgataaaaaagacgctgtttccaaaaaaaatagcGCGTC
TAAAAGGCGGAGACAGAAGAGCAAGCATGTTTGGGCTCTGTTTTACCAAA
GAGTTTTCTGNTtggcgctccaaagtcatagcttggaatacaacaacacc
gcgtgaacagaaatttagcgtctttagcgctccaaagtcatagcttggaa
tacaacaaaaagcaaaaaacgaggaaaaggataattacaaggtctcaaaa
gaaggttgtctattgctcattccgacattttaaattttccaggggttttg
ttgtttggaat Run BLAST on NCBI transcript from alignment at sc0000087:188575..196740- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008771 ID=TCONS_00008771|Name=TCONS_00008771|organism=Clytia hemisphaerica|type=transcript|length=8166bp|location=Sequence derived from alignment at sc0000087:188575..196740- (Clytia hemisphaerica)
AAAAAAAAACACATCAAACTCATGGTGGGATGACGAAAATGATGAAATTA
TTCCTGGAAGTTTGACACAAAAAGATAAAGGTGAACTTTTTTATTTCTGA
ATTCATTTTTGACTTCTTTGAAAAATGTCATTCTTTCCCACGGAATGACG
TCACACGAGGGGGGAGAGATCGAACATACTCAAATAAAAACAAACAATTT
ATCAACAAAATCATTTTAGTGAGTTAGAACACAGTGTTTGTTTTCCCCTC
GAAATCCAGAAAATCTATTGGCTAAAACACAAGTCACATGACTATCCGTG
GCAAAGAATAGTCTGCTAATAATATATGGTCAACAAGTTTCTGAAATAGT
TTTAAATCTACTTTCCTGTACGTGAGTTTTACTTGCTTAAAACTGTTTGG
ATGCCTTACACCTGTGAAACGTAGGCTAAATCACATTTCCTTCGTTCGGA
ACTTCCCTTTTTTGGTACTTTGGTATTTCTTGTTGTTTTTCGTAATGAGG
CTATGAAACTCTTTTAAACGGAATAAACAAATTTTATAACCTCGAACGCT
TGCGAATAATTTTTCAAGGAAGTTTATTTTACTTTCTATATTTCCTTATT
TCCTTGTGAAAGTTTGTTTGGTTATCAGTTGTATATTTATCAAAGGCTCA
GTTCAGTGTTAATGTCGTCTGATCGACGTTTTATTATTACTTCTCTAGTG
GCTATAGAACGGAAGTTTGCATGTTGTTGTTTTAAAGAGATCTTATCTTA
TATACGAAGGTATACTTGCCAATAAATTTTTCCTTTACTCTAAACTCTGA
TATTTTACAAAGACAGCTCCTCAACCTTTCCTTCATTAAAAGAATGTTTT
AAATAATGATTCTTTTCAAATTGTGCTTATAAAAAGAATTAGAGGACCCA
TCATAAGTTTTGTCTCTTTTATCCAATTAATTAAATAAACTATTTTCCGA
CTCGCTTGGCCAAACAAAACATCAGACGAGATTCTCTCGCGCCACTTTAA
GAACACGCGTGGTGAAGTCTAAAGGTCGAGCTTCCTCATTTTGTTGCTAT
GACAGTTAATTTGTGATTGCTCCACGTTTCTGTCTATTTTAACACTTCAA
TATTGTCACAAGGTTATCTCTTGTTTTCAAAAATGTTTTTTATGTGCAAT
CGTTTTTCACTGTGTAAAGAAATGAACTTTGGTTTCTGAGAGAGAGTTTT
AAAGAGTAGGTTGAAAGGTTTTTCGCTGATAATAAATAGACTGATAAAAT
AATTTTTATAAATTTTTCTTGGATTTTAACATCTCTTTCATTGTCTCGGC
CACAGCCATTTTCGAGTTTTAAGTAGTCGAGTTTTATGCATCATGTTATG
TGCTAATTATGCTTCCTTTCGCAAAGGAACAAAATTTTTCCCTGGCTTTA
TTTTGTTTCCTTTTTCAACTCTTTTACTTTAGATAGTTTTTGTGTTCTTT
ATCTATCTTTATTTTAGTGAGTGAATGAAATCTAATCAAGTTTATCTTCA
GGCTTGTTTGTTTATTACCTTAGATTTTTATTTTGAATATTTAGTAGCCC
CAGGTAGCCCTGCTATCTGAAAAAGATCTTTATATTTACAATCCTTCCTC
TATATGTTTAGAATCCTTGGTTAGAAAATTTTGAGAGCTTTTGGCACACG
TTCGCTAAGTTTGGTTCAATTTTAGATTCACACATATGTCAAGTTTTTCT
TCTCTTAGTTGCTCAGAGATGTCTTTATAGAATGACCCACAAAATGTTGA
CTTTTTAATGAATGCATCGTTTGAGCCTTGTTGTTGTTGCTTAGCAACTT
TATTTTGTTAATGGGGTTTAAATGATAACCTCCCTAATTACACTTGAATA
TAATGAGTGAGGCTGTTATCTTAAACCTGTCCTACATATGCAATGTTAAA
GAATTCCTGTTCACTGTTCAGTAGTTACGAAGATAAGTGTATAGCTGATC
ACGCCACTTTTTACAAAGATTTGCACTCAAACGAGTTCGGACAAAGGAGT
TTAGTAGAGTTCTTTGTACATATGTGAGTTGTTCTGTGTCAAACTATATG
GTCCAAGCAGCTTTTCGTTGGGACCCCATTTTACAAAATGGAAGTAAAAA
CTTTGAATTGATTGAGGGCTTACTAGCTGATGTCTCTTCAACATAAATAT
AGGTAGTCTTAAACGATTATCCTGTAGAATTTAGAAAAGCAGAGAAACGA
GAGAGCTTCAAATTTCAAGACAATATGGTTTTCCATGTTTTGGGTTTTGT
ATTCTATTGAAAAGTTCAATATTTAAAGTACGTAAAGTAAAAATGTAATG
AAAAGTTTTTTATGTCCTTTCACAGTGTTTTTGGAAGTTTTAAATTATAT
GTCATTTGCTTTACTATAGTAGCCATCAATTTGAACTGACTGGTTTTCTA
TCACTAGCTCAACTTTTGTATGGAGGGTTATTGAACGTATTTTTTCCTCT
ATAATTATTCCTGCTAAGGACTTGACTGAAAAAATTGTTTAAGAAACTTG
GAAAGGATAGTTTATCACCAGAACTAGTTGTCAAAAAGCCTTTGCAGCTA
AAATTCACTCTTCAAAAAGTTTGAGTTTCAAATATTTTTGATAAATGAAT
GATGAAGTTTTTAGCTTGGGTCACTTTCAATGCACTTTCCGGGAATTACG
AAATACGTCATTACATCACACTTTTTATCAACAAAAACATTGACTAAACC
TCTACTTTGTTTATGTTAAGATTGCAAGATATATCAATGGTTTTTATAAG
AAAAGGACGTTCTTCTTTATCCATAAGATCAGCGGGCGAGTTTTCTTAGG
TGCCAAATAAACGGGGCCCCCCGCTTGTTAATTTTTCGAAAATTTTCCAA
CCCCCACATTTTATTAGGACCCCCCCCCGTATACTGATTTAAAAAAAATT
TTCAGCTGTCAAAAGGGAAGGCCTCTCATTTTGCTCTAAATAGCCTGATT
TTAGCCTATATTTACCTTATTTTACCTTATTTTTGGGTTTTCAGAAGTAC
AATTTCCAACTCCCCCGGCAATTAGGTCCCCCCGTTTATTGAAATCTCAA
AAATTTTCCAACCCCTAGTTTATTCCAACCCCCCGTTTATTTGGCACCTA
AGAGTATTACATTACAAAAATAGAAGGCTATAATGCCTTACCTCAAAACC
CGACCAATACAAATGCTGTTCCAGTGTTGAAATTCTTTTGAGGAGTTTAC
TCTTTGACCTCCTTAGAAACAGCTAGAAAAGTATCAAAAGCATCGATGTT
CTTATAATGGCCTTATTTTGATACGGTTTACTTTCATGCAGAGGCATGGA
TGTAAAATTATTTCTTCGTTAGGTTGAAAACTAAAAAGTTTATTGTGAAG
TAGTCACACTTTTTTTATCAAACCTGAAGTGGATTTGTTCAATGCTAGGT
CGTTATTGTTGCTGTAATTCTGATCTCTAAGGCCTTTCATTTTATCTGTA
GTAAAAAAGATTCATTTTAAGTATCTTAAAATAGTTTTTCAACCTCAACC
AACATCAAGTGAAATTCTTAGATTTTTCGTTTGTTAAATCCGTCACGAAA
TTTTAGTTTGGGCTCAGTGGTGGTTTGTCGTGATGAGATAGATAGAAAAT
TTACATCCAAATTGAACGTTCTCTTATAATAGTAATTCCAATCTTGTTAC
CTTAACCCAAATAATCCACAGAACTTTGTCGTACTGACGATCGGGTTTCG
CTTATTTTTAAGATTTGAATTTTGAAGTCGATTGCGAATCTTCTAACTTC
AGATTTCTCAGTTTTGTTTTCTTTTGATTTTTCAGGATTTAAATTGTTTG
TGAAGAAGAGAAGAACACGTTACTAGATTATAAATGATGAATTCTGACAT
TGTGGAACAAGAAGTCCATTGGTTTTGGACTGAAAGCTTTTGGTTACCTC
CTGGAAGAACATGGAAAGATTATGAATCCACTGACACACTCACTAAAGCA
AATTTCCGAGATTTATACTTTATACCGATATATGTCATTATGTTGACGTG
CGTCCGATTTCTATTCGAAAGATATATAGCAAAACCATTTTGTGTATATC
TTGGAATTGAAAACAAGACCTTTGAACGCAATAAACTTTGTGAATTGGTT
TACGATACGGTCACTAAGTATCCAAAAACAAAGGAATATGAAGCCATTGC
CAAGGAGACTGGCATGACCACAAGTGAAGTGAATTCTTGGTTTCGACGCC
GCAGAGCAAGTTCTAAGAACTCCAAAATGAACAAAGCTACTGAGACCTGC
TGGAGAGCCTTTGTTTACTTATTACTATTCATCTACGGGCTTTTAATACT
GGCTAAAAGTGATTGGTTTATGGATCACTCCACTTGGCTACCAGGCTATA
TCAATCATCCTTTTACAATCGAATTGAAAGTATACTATTTCGCTGAGATC
TCATTCTACTTTTCACTCCTTTTCTCGCAATTTTACGACACAAAACGTAA
AGATTTCCTACAGCAGTTTATCCACCACGTAGTCACCCTCACACTTTTAC
TGGGTTCGTTTCTCCTATCAGCATACCGTTTTGGAGCTATCATCATGTTT
ATACACGATACAGCAGACTTTTGGTTAGAATCTGCTAAACTAACAAATTA
CGCTAAACTACAAAAAGTTTGCGATGTGTTATTTGGTATTTTTGCCATCT
TATTTTTTGTTACGAGACTCATTTATTACCCTGGATGGGTAGCATACGCA
TTCTTCCATTATAACAATGAAAGTAAAGGTATTGTTTTTAATACTTTAGT
TTGCCTCTGTTTCGTACTGTTATTCTTGAACTTTTATTGGGGATTTTTGG
TCTTGAAATTGGCATACAAAGTACTGTTTTCTGGTAAAGGAGCCTCAGAT
ACTAGAAGTGATACCGAAGATTCCAGTGGTAGTGAGGATTGATGGATATC
ATTTGTATTGAATGCTTAGAATTAAATGCGATGTTAGAAACTTTTTTTTA
CTATAAATGATTATCATTATAGATGCTACAAACTTTGGAATTCTGGTGTT
TTGTGGTTAGTTTTTTTTTTAATTACTGGTCTTTTGTCCGGACAATCTGT
AGAATCTGCCTCATTTTTTTAAGTTGAGGCACACAAACATTTTTACATCT
TTAACACTAGTTCAATGACTGTGGCGTAATAAAATGGGATGGAATTTATT
GTAGAGGTCACATTGGAGGCTCAACACCCCTTGATTCTTGAAGGGTTTCT
CGAAAACGCCTTGAATTTGACAACCGACTCCGCCGGAACTACTTTTTAGA
GTCAGACCTCTGGCTTCATTTTCTTCAACAACTTTCTCTTAGGCTAAGAA
CCCAATTTTTCTACTATACAAAACGTTTTTGAATATGACTCACTATCAAG
CTTGAATTGTAACACAGTAGTGTTCTTCCATCTTACGTTTTTTTTTATAT
TGCAAACTTATAATATATATCCAAGTTTGAATTTATACAACAGAACAAAT
TATATTCACGGCCTTTCACACAATCTTCCTCATAACACACAGATTAGACA
CCTCCTTCTGACAGACCCGGTGGGGCCCCCTCCCACTGGAAGAATTGGCC
AAAATAACGTCCCCAGTGGATGATTTTACTCCAATTTTTGTCGCCGTTGG
AAAAATAAAAAAAGCAAATCCTCGCACTGCAAGATATCGATTTGAATATC
CCTAGCTGAATTTTCTGACTTGAAAAAAATGGAATGCAAATCCCAAGCCA
TAAAAAAAGATAAAAATTTCCCTATCGAGTTTCAGTCCGTTATTTTTACT
CACTGGCTGAAAAAATCCTACCGGGTCTGTGAGGAAGGGGTGTCGGGTGT
AATTGCATTGGGATTTGAATACATATTTGCGGGACCCGCGTGGTTTTCAC
ACAAATGCTAGATAAATTTCTCGCGCACGAAACCTTTGAAAGTGTGCAAT
GCAAAAATATACAAAGAAAGTGATTGATTTAATTACCGGTCTGAAATATG
AAGCAAATCCTTAACATTTTTTCTTGCCTGAACATGGTTGAAGATTAGCT
TCGGGCTATACTTTGCTTGTTTTTATAACCTCACTCGTCATACATTTTCA
TTTTAAAGTAAGCTTAGTTTTCTTTTTCAAATTTTTAGTATTGATTTTTT
TGGATTTTTGTCATAACATTTTTGAATTTTTTTTTTAAATTCTACAATAG
AAATATTTTTTCGCGATATTCAACAGGCGAAATTTGATAAATTAATCAAA
GCCACTAAAATTTAAATAGACGAAGACTCTCGTCTGGCTATTGGGTTTAG
GTATCGAAAAACCATTTTGCCGGCCTATTTTATAATTGTAAAATTCACAG
GTTGCAAAAGTCTGAAGACAAATCACGCTTTTACTCGAAATTTTAAGTGG
TTGTTACATGACATTTATTTCATTTATATATATCAGCTGTAAGTTGTAAA
GCAAGTAAAACATGGGAATAAAATCACGTGAACTTTTTCGAGTAATCACA
TGTTTTGACTGCATTGATATAATTTTGCAACCCGTGTAAAGGAAAAACCG
GAGACTTTGGATTTTATGGAAATGGAACAATATATTTTCACATTTAGTTG
CGCCTCATACAGTCAGGGATAACTTCAAATTAGCCTACCATCTCGGAATA
TCACCTAATTAGCCTAGAATAAGCTCATAATGAAGAAAAACTTGATTTTT
GAGCCAAATACTAATAGTCGCATCCTATAAATCCTCAGATTAATCTCTAA
TCACTCAATTAATGTATATTCCAAATATTACCTCTTAATCAGCTGCAGAA
TAGGAGATATTCAATTTTTTCTAACTGCGCATGCGCCGAACATGCGCAGT
ATAAAAGCTTTGACATTTTTCGCGGAAAATATTTTTTTGCACACGTTACT
AAGATCAGAAAATTAGCCTATACATTTTTTCTGGGAGCTGAACACAAAAG
ATTTTTAAGTGGAGAATGTTCTTTGAAACNATGCTATAATTTTGACCATT
TTTTGCACGAAAGGGATCGAAAATTTTGGGGAAAATGCACTCTAAGGGTA
TGATTTTCACTGATTTTTGCTGCACCGTAAGGGTCTAATTTTAAAAGCCA
ATTTTCGGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCCGGGA
TCTACTGCTAATTTCACTTCCATACGATTTGAAGCATCCCCACTGGAGTC
TTATCCCAGGGGGGGGGGCACTCCAGGTAAGTGATCTACGGAACGCGCGG
CCCTTAAGGGTTTGTTTTTTGGACTTTGGAAAGTGCACTGTAACTGTAAG
GGTGTAAAATTTGAGAAAATACCAAATTTTGAGGTAAAATTTGAGAAATT
TCAAAAAATTTCGAAAAATTGCACTATAATAGTCAGAAAATCTGCCGTAT
ACTATCTTCGCTTTCTGATTTGAATTATGGCGCTGCGATTTCCCCCCATC
AGAGAATTAGTAAAGGCAAAAAGTAGTTGAGCTCCAGCTCCTGGACTAGC
ACTATAAGGGTCGATTTCCAGCCAAATTTTTCCTACACTGAAAGAGTGGT
CCGATTTTAGAGACCTGATTTTTGGCCGAACGTACGGGTTGTTTTCAAAA
TCGAGTGCCCAGCCCCCGGGAGTCTTATCCCCTTTTTATAGTGCTGTGCG
AATTATTCTTGGAATTTTACAAATCGAACGTTTTTCGAATTCGAATGTTT
TGAATTTGTTTTTATTTTTGTTGCTGCATTGCAAATGTGAGCATGAAAAA
TTGAATGAAAGAGTTGAAAATGTAATTCGAAATGTAATTCTGGATAGATA
TTCCCTACGATTACAAATTTGAAGATTAGAGTGCAATGAAATTTAGAAAT
GCAGAATTGATTTTGTTTATTACTTCTGCAGGGTTATCATAATCGATGCA
CAAAATGATGAAATAATGATAAAAAAGACGCTGTTTCCAAAAAAAATAGC
GCGTCTAAAAGGCGGAGACAGAAGAGCAAGCATGTTTGGGCTCTGTTTTA
CCAAAGAGTTTTCTGNTTGGCGCTCCAAAGTCATAGCTTGGAATACAACA
ACACCGCGTGAACAGAAATTTAGCGTCTTTAGCGCTCCAAAGTCATAGCT
TGGAATACAACAAAAAGCAAAAAACGAGGAAAAGGATAATTACAAGGTCT
CAAAAGAAGGTTGTCTATTGCTCATTCCGACATTTTAAATTTTCCAGGGG
TTTTGTTGTTTGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008771-exon-sc0000087-1575043694:196661..196740 | TCONS_00008771-exon-sc0000087-1575043694:196661..196740 | Clytia hemisphaerica | exon |
| TCONS_00008771-exon-sc0000087-1575043694:188575..192955 | TCONS_00008771-exon-sc0000087-1575043694:188575..192955 | Clytia hemisphaerica | exon |
| TCONS_00008771-exon-sc0000087-1510915933:196661..196740 | TCONS_00008771-exon-sc0000087-1510915933:196661..196740 | Clytia hemisphaerica | exon |
| TCONS_00008771-exon-sc0000087-1510915933:188575..192955 | TCONS_00008771-exon-sc0000087-1510915933:188575..192955 | Clytia hemisphaerica | exon |
| TCONS_00008771-exon-sc0000087-1491911889:196661..196740 | TCONS_00008771-exon-sc0000087-1491911889:196661..196740 | Clytia hemisphaerica | exon |
| TCONS_00008771-exon-sc0000087-1491911889:188575..192955 | TCONS_00008771-exon-sc0000087-1491911889:188575..192955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:188575..196740 - |
Blast
BLAST of TCONS_00008771 vs. Swiss-Prot (Human)
Match: CERS6 (Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.057e-47 Identity = 125/331 (37.76%), Postives = 185/331 (55.89%), Query Frame = 3
Query: 165 WFWTESFWLPPGRTWKDYESTDTLTKANFRDLYFIPIYVIMLTCVRFLFERYIAKPFCVYLGIE---NKTFERNKLCELVYDTVTKYPKTKEYEAIAKETGMTTSEVNSWFRRRRASSKNSKMNKATETCWRAFVXXXXXXXXXXXXAKSDWFMDHSTWLPGYINHPFTIELKVYYFAEIXXXXXXXXXXXXDTKRKDFLQQFIHHVVXXXXXXXXXXXXAYRFGAIIMFIHDTADFWLESAKLTNYAKLQKVCDVLFGIFAILFFVTRLIYYPGWVAYAFFHYNNESKGI-----VFNTXXXXXXXXXXXNFYWGFLVLKLAYKVLFSGK 1133
WFW E FWLP TW D ++T+ T DLY + VR +FER++AKP + L I+ + N + E V+ +TK+P K E ++K+ + WFR+RR K S + + E+ WR YL +F YG+ L K+ W + Y P T +L YY E+SFY+SL+FSQF D KRKDF F+HH+V++ L+ S++ + R G +++ +HD+AD LE+AK+ NYAK QK+CD+LF +FA++F TRL +P WV + E G VFN L ++ LN +W +L++K+A K + GK
Sbjct: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL---LLLLVQGLNCFWSYLIVKIACKAVSRGK 334
The following BLAST results are available for this feature:
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