XLOC_005027 (gene) - C. hemisphaerica

Overview
NameXLOC_005027
Unique NameXLOC_005027
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000089:123793..127531+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005027 ID=XLOC_005027|Name=XLOC_005027|organism=Clytia hemisphaerica|type=gene|length=3739bp|location=Sequence derived from alignment at sc0000089:123793..127531+ (Clytia hemisphaerica)
TGCATATGTATTTGATAagcattgcaaatttagtgaaacaaacacacaca
agaactttctttctatagaaatggtacgactcgatactttttttccggac
accctgtagcATGAAACTTTTAGTAATGTATTTTATATggtgattttgaa
aatataacttTATTTCTTTATGACTCGCACGGTAATCTAATGTGgaactt
taaaaaattgggaTTTTTTCGGCTATCTTTGTTGTTATGTTTGAAATTAT
AGTGTTTATatggagatgaaattttgcatttttaccCCGCATATTTGCTT
TGCTTCTATAACGAAAAATCAAGTGGAAATTTGTTCTAGGAGCAAAGCGG
AAACTTTCAGTGGGGATAAGTCTACCTGATGGTGCTCACGGTTGTATCAA
cgtctagcctggatatccaagctcaaaattttagaaaaaacaaaatttcc
ctcaacatacaaagttctaaaattatagagcttggtctccctagagaatg
aaagtgaaaacccatgtttcctagccaacccagggcagcaaaagcAGTCc
gtacaagatctaaaactatttaaaacatccaaagattacatcaaagtcca
taaaaaagtttgcatgcattatcatgaccaaccatgttttcttggaaaat
gaacttggctctgttttcttctttttcatgttttcatgttttcatgtaac
agaaagccctatcttcactagcaactggaggactatcctatttttgcttt
agaattgctcaacgccgtgtagattggcccttgcggttttagcgaagtga
gcgcaatcaagcggactgcattctctaaagagaatgcaaatcgctctagg
gagaccaggctgtaagccagaacataaaatatcaaaaactagactgtgaa
atagtttacagcctggatatccaggctaatcaACGTCTTGATATTGGATA
TTTTTTCGTGTATTACGCATTGTGAAACTCGTGGTTAGTAAGATTCCATC
GGTTACTAGGGATTGATTCATCCTGTCAGAAAACGTAGTTTAGTACTGAC
TTGTGTgggataaaataaaattgtattCAAACATCACTTTATCTCTTGTC
TATGTATAGAATTTTTAATTAGTTTCTCACCATTCAGCTATTCTGAGATC
CTAAAGACACTATACATCTCTTTCAAACTAAGCAAATTGTTTTATGAAGG
AtgtactttcgtttttaatGTACTTTACAGTGAAGGTTTCATATCACTTT
TACTTTATATGTAATGTAAGCTGTAATGTTCCATCATATGTGGTAGTAAT
TGTGGTATCTAGCAAATGCTTAGGTAACATCGGTAAAGTTTCTAACTAGT
TTCTCTTTTGACCAAAATGGTGCGGTGACTCTCAATTTTGATTGAAGATC
TAATTCAAAAAAGTGGAACACTGTATACATAGAGATCTTGAAAAGAGGTT
TCCAACAAACCCAAATATGATAAATTCTGCTTTAGTTAAGGCCGGGGTGA
TTACATTTAAAGTTGCCATACCGCGTTGctttaaaaaatccttaaatttt
agtttcaaaaaGTACCAAAGAGATTAATCACAAAATACGAAAAGGAAAAT
CACAATAAGTCATTGATGGTAAGCCATGgccgattatgacgtcattaaaa
aagcGGTGGTCGGCAGTGTTGCCATAATTGGAGGAACCTCTTTACTGACT
GCTGGTTTAGCAACTGCGCCGATTACTGGTTCTGTGGGTTTAATGGCGTT
TGGGTATACATCTATTGGTGCCATTTGGGGAGGAGCTGTAGGAGGTAAGC
CTAGCAATCATCTTTACTGTATTCACGAATAAGTTCCCGGATATTCTCGC
TTTAGTTTAAGGTCAAAGTTCAACATAATTTTTGGGAATCTTTGTTATTG
TTTCTCCTTCGTGTATGACGCTTTCTGATGTAGCTTTCTGGTACAAAAGG
AGTGAAAGAGCACAAAAAagcatcttgaattttttgtttgttatatTGAC
TTGTTGGTTTGAGGCTTTCTCTCGACTACTCTTTTGCTTTGGGTGATTTG
ATTTACCCAAAGGTTTCCCAGCAAAATTCCATTATTAATcttatacactg
aatgaaatacacccccttctcacagaaccgGTAGATaggaatttttcagc
cagtggggataaaaattactGACTGAAAGTCGATGGTGATTGATATTCTA
TTACGATATTTTTTGTGGCGGGGAAtttcaattcctttgttttcaagtaa
gaaaattcagtggggatgggaaaaatagcataatattttccAGGATTAGT
TCATTtggttattttcagtggggacaaaaatcagaagataattttccacc
gggatgATATTCTAggaaatttttccagtgggaaggggtcccagtaggTC
TGTGAGGAGACGGTGTTGAAATTAACACGATCACATTGTCAAAATCTACT
GGTTGACTTGTGTGTGAAAAAGAGGAAGAGAATTGCCAGCAAGGGGTTTT
CACATTTATCTAAGAAAAATGTAGCTCACGTAGAaaccaaaaaacatttt
tatcgaTCGGCAGTCAAATGGTTTTGAGGGCTTCGAGGCCTGTTAATTCC
TTCTATGTGGTCTTTAGCAAAACTTCCTGTattctttttgcctaaactgt
TTTCAAGAGAAGATATTCAAGTTACAATACAAGTTACATCTTTAATAttc
tttttaggttttgccaTGTGGTTATTTGACGATGGCCAAGGACAGCAAGT
TGCTCAACAAGAAGACCATCAACCACACCAGCAAATTCATTTGCATCAAA
CAAACATCCATTATCACCAAGTCAACCACTATCACGTCAGAGAAAGAAGA
TGATTCGTTGAGAGAATATCTCTAAAAGACAATAAATTTGCACCTATATG
TACATACATATCCTCTTGTGTAACTTCTAGTAGGGGGGCAACCTTTAAAA
TCGGTAGCATCTTTCGTGAGACGCAACTGTATGTAATTGATTCGAAAGTA
GATAGGACTTtgagacttttttgagagggggccCGCCAAATACGCCTGGT
TTAATTGTCAAAAAACTAACGTTATAGGCAAAACTCCTAATTCCAAAATA
TGAGTAAGAAgttgacatttttttaaagttgaattaaacgaaaatgattg
atacCATCGAATAAAACATCTTTTTTTCTATACTAAAtgaatttcatatt
ttgtgTCCGTCACGCATGATGGCAGCAAAGCTGCGAAAGTTTGTCGAGTA
TTGTCGTCATTGTTTACTAGCTAATTTTATTGTGAAGATTTCAAGTCATA
TTCTCACATTCaatttgaagcataaaaagGTATTCACAAGAAATCTTTTG
ATGTACTCCGAAAACTAATtcaaattttccttcaaaataaagttagagag
catcaacaatACGACCTTTATCATCGTAAGGGCTTTTGGTGCAcaagcta
aaccggcgtttgcaacgacgggaaccgtctaatctaccgggtgacccacg
aaaaagttcggacagtTTTCGGCGTCTCGAGGCCGAAGAAATGTctcaaa
gtgcttgaaattttcatatgtagaaagtagatattctaacttaaagtttg
agctattattttttaaatttgacccacAAGTtccctacttatgagctttt
aaagtcaaaattaacTTTTCGGAATGAgcgaaattacgtcaaaaaagagg
tatcaaattgttttattatcaatcaatcaagtaAGGTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008952TCONS_00008952Clytia hemisphaericatranscript
TCONS_00008953TCONS_00008953Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:123793..127531 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68	1.66	2.16	1.94	0.96	0.59	0.76	0.82	0.51	0.83	0.17	0.53	2.98	2.64	0.28	0.24	0.21	0.09	0.28	0.18	0.31	0.28	0.7	0.72	13.11	9.93	0.27	0.17	0.18	0.22