XLOC_005053 (gene) - C. hemisphaerica

Overview
NameXLOC_005053
Unique NameXLOC_005053
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000089:468266..475431-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005053 ID=XLOC_005053|Name=XLOC_005053|organism=Clytia hemisphaerica|type=gene|length=7166bp|location=Sequence derived from alignment at sc0000089:468266..475431- (Clytia hemisphaerica)
TTCCCAACATTACCAAGTTCCTCAGATTGTTCCAGCACAACGTGTCCAAC
ATGTGTTTCCACAACAACAACAGCTGGTTCTGCCACTCCAACAACGGCCC
TTTCTATGGCAAGGTGCCAGTGGAGAAGGCACATCCAATCGACTCCAATT
CATTCCGAACCAGCCACAAAGATATCCAGTACCGCTCAACGCGTGTTTCG
TGTGCGGTGAAACCGGCCATTGGAAGCACCAGTGCCCTAAAAGGTCAACA
ATGGGATAGTGGTAAGAGAGTTTTTCTGTTATCTCATAACAAACCAAGGG
TTAAAGGGAGTTTGAGAAGACACCTTCATTTCTGGAGAGAAAAGTTAGAG
GCTAGTACACATATTTTGGACGTTATAGAGCATGGTTACAAAATTCCTTT
TAGATATAATCCGCCACCTTTTGAATTTAAAAACAACAAATCAGCTTTAC
AACACAGAAATTTTGTGGAAGAGACCCTTGAGAGTTTATTGGAGGAGGGA
AAAATTTTTGAAGTCCAGAGACCTTTTGCTACTAACCCTTTGTCAGTGGC
AGAGGATCCAAGTGGGAAGAAAAGATTGATTTTGGACGTCAGTTTTTTAA
ATCAATTTTTGTGGAAAGAAAAAATAAAATTTGACGANNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNTCCAAGTGGGAAGAAAAGATTGATT
TTGGACGTCAGTTTTTTAAATCAATTTTTGTGGAAAGAAAAAATAAAATT
TGACGACTGGAAAGTTTTCGAGGATTTTATCGATTCAGATGCAGAGGCAT
ATTTATTCAAGTTTGATTTGAAAAATGGGTATCATCATGTGGACATACAC
TGCGACCACCAAAAATATTTAGGTTTTTTACAAGATTTAGCGAACGATAT
TTATATAGCTTGTAAGAAAAAGGACATAAAATTGACTGTCACTTGGATTT
CTAGAGACCAAAATGGACAAGTGGATAAGGTAAGCAAAACAATAGATTAC
GACGATTGGTTCGTAAAAGCTACTTTTGTGCACGACCTGGAAGCAAAGTG
GGGCAAGTTTAGTATAGATTTGTTTGCAGATAGCGACAACACTAAATGTG
CACGTTTTTGTTCAAAATATTTTTCTCCAGGGAGTTCTAAAGTGGATGCC
TTTTCGTTTGATTGGTCGGGAGAATTTTGCTACATAGTCCCTCCGGTTTA
CCTAATTCCCAAAGCAATTAAACATTTTATAGCTTCCCAGGGGAGGGTAA
AAGGTATTCTAATTGTTCCTTATTGGCCCTCTGCAGTATTTTGGCCTTAT
TTGATTTAGAAAGAAGGTGTTTTTAAAGATTTTGTCAAAGAAGCTGTTTT
CTATAAGGATTCGCGGTTTTTCATTTCCCAGGGGGAGTATAAGGGTTCTA
TTTTGGGAGATGAGGATTTAGTTATACCTTTTTATGTTTTGTTGATTGAT
AATCTTTATATTTAGATTTGGTTTCAAGGAAAATCAAACAAAGTTTTCAA
GTTAACGATCCAGAGTTGCAAGCGTTAGTTTATTTGGTGCCAGGGGTATT
GAATTGTTCCAGGGCAAACAACACAATTACGAAATACGAATGTTATTTTA
AACAATGGGTTAATTGGTGTAATTGTTTTCAAGAGATAGTGCCATTACCA
GCAAAAATTCAACATATCATTTTGTTTATAGTCGCATCGGTACAACAAGC
AAAGTCTTATCCGGTAATAGAGTCAACCCTAATGGCCATAAAATATTTCC
ACAGCGTGTCGGTCATGCATTAAAACATTCGAAAATGTTAGAACATGTTT
TAGAGGCGGCAAAAAGATTGGTGGGGAAGAGCGCTATAAAGAAGGAACCT
GTCACAGTAGACATGTTAAGGAGAATGGTGAAAGTTTTGTCAACATCGAA
GAATAACCTCAAAAGCTTGAGATTGACTACGATTTTACTTACGTCTTTCG
CTGGGTTTTTACGATTTTCTGAATGTGTGAATTTACGAAGATCCGATATA
AAATTTTTTGCCACACATGCTGTTCTTTTTATTGAAAAGAGTAAAACTGA
TATTTATAGGGTCGGACATTGGTTACATTTGGCAAGATTANCGAATGTGT
GAATTTACGAAGATCTGATATAAAAATTTTTTTGCCACACATGCTGTTCT
TTTTATTGAAAAGAGTAAAACTGATATTTATAGGGTCGGACATTGGTTAC
ATTTGGCAAGATTAGATTNATCGCCTCTATAGATTAAAATGTTTGCTTCC
ATAATGGTGGAATCTACCTCATTTGGGGCCGTCTACATAGTACGTACGCA
CTAAAATGTCGAAAATCGAGACCCACCCCTCCCCCCTTAGTGCGTGTACT
ATGTGGACGGCCCCTTTAATAACACATTTGAGTGCCATCACTCCGTAACA
AATGAATTAAATATATTTTAGACCTAACTCCAGGTACCCCGGTGCAGGTC
CTTTAAATTAACCTGTGTTCGTCCGTCCGTCCGTTCGTCTGTTACCAGCT
TTTCTCGAGATTGGTTCATTACTTTTTTCTGATTTCTTGCACAATGATGT
AAATTGATGATTCCTAAAAAGTGACGGAGCCCGATTTTTATGCCGGAAAA
ACTGTTTTTTGGCATTTTCTCGAGATTTTATCTTTGAGCTTTTTTGCTCA
AAGATGTGTATTAACAATGCCCAAAACATGCCCAAGTCCGATTTTTGAGA
AACAAATTTTCCCGGCGGAAAATACCGGAAATATGCCGGAAATCGCCGTT
TTTCTGGTTTTTCATTGGACTTTTTCCTTATAATTGGTTGTTATTTCATT
CAAAAACATTATTATTAGCAATGCCCACCATCAATCATGTTTCAATTTTC
AATAAAATTGATTTTTGAAGCTGGAACTATTTAAAAATCGTCGGAACAAC
CTATTTTCGTCGGAAAGACAGTATTTCTTGAATATCGAGCTGTACTTTAT
ATTTTTTTATGAAATTTTACACACTCATGCAAAACGACAATACCTAAAAT
GTGACGGAGCCCATTTTCAAAAAAAGAAATTCCAGAAAAACCGGTTTTTT
GACATTTTTTCGAATTTTCATCCTTTGTTTTTTCTGATTTTTAGCAGAAA
GATGCGTATTCGCAATGCTCAAAACATGGCCGAGTTTAGCCAGTGCCTTC
CCACAAACCAAACTTTTTCTTTGTTTTATGGTCAGTTACACTTTGAAGCG
TTTGTCGAAAGTTATCGCACTGTGGTCTCAATTTTTGAGTTCCGTGCATT
AAAATCAAAAAAAAAGAATCCTCGGGATCGGGATGGAGTTTGGTGAGCTA
AAAATGTTTTTTTTTTAATTATTTTGATACACCCCTAAATTATAACGAAA
GAACTATAGAAGCAAAAAAGTTTCCAAGCAGCTCCAATTAATGGTATTGT
CAACAGGCTCTTAATTTAGAAAGGTAATGAGATAATCCCACTCCTTCAAA
AGGTTTTCTTCCTTGTAGAGAAAAGCAACCAAAATCAAATAAAAGAAAAC
TCTCAACACTAGCCATAGCCAGTTTTTGAAACAGGGATGTAAAATAAAAA
ATAATGAGGATTCCAAGACTATCATTTGATGAAAATGAGTCGATCTCGTG
CAATTTCAGGATTAAGAGGTACAAATAATAGAAATATGTCATTAATGTAT
TTACCAAAAAATTTAGCAAAGTTCTGCCAAACCTCCACATTTTACTGGTT
TACTATCTAGTTTCCAAAGTTGAGAAATTTAAATCTAAAATCTGCTCTCA
AAATCAATTAGTAGTTTTAACTCTGATTATACAGGACCAAACTCTTCACA
TTAAAATGTAAAAATTCCCCGAAAAATTCTAGAATAATATCATAAAAATA
GTGTCAAGTTTTGGCAATCGTCCAGAATTGTCAAGACTTGTATGTCACTG
GTGAAGACAGCTGTGAAGAAAGTTTTTCATTTCCATTCCCAGCAAACTTT
CGAATCGAATACAATCAGATTTCACTTTACTTTCGATCATATGTCAATTT
ACTTTCCACCATTTTATTAGTGGAATATTTTCAAACTAGCGACCAGATAG
AGACCACATCGAACAGCCAATAAAAACAATAACAAACAAACAGTTCTTCT
TTCCACTGGAATAGGCCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAGGAATAAACAAAATAAAT
TCTTCCAGGTTTCATGCCATATCCAAAAGATATTCGTTGCCATCCCAAAG
CATACAAAAAGTACAAGTTCGTCTTCAATCATCGACGTTGCATTGCAGCA
CTTATGGTTCTAGCTAGGATAGGATCTAATCTGATTTGATAATCTTCATT
CTCAATGTTTACAGTTAATCTCTGGGATTCTTCAATCCTGTTATGGAAAT
AACCCAACAACTCTGCTGCTGTTGATGCAAAAAAAAGATTTCCATCTTCT
ATTCTCCTCCATCCACTGATACTGTTTCTTTTTCGTTCGGTTTCAACTTT
TCAAAACAAATGATTTTGGTTCTCTCTCAAAAAAAATTCAAANGGTTTCA
ACTTTTCAAAACAAATGATTTTGGTTCTCTCTCAAAAAAATTTCAAAATT
CGAATCACAAAATTCGAATTACAAAATTCGAAAGATCGAAAATCTATTTG
AACTTTACCGATCGAAGCAATGCAGCGACTTCTTAAAAAACGAAAAAAAG
CACACGCGATGGAGTGCAGCTTGTCCAAAGTCACGGTAAAATGAGCTGCG
CCGAAGAGAAAATCTTGGACGGACTTTCCCGTCCAAGAACATTCGATTCC
ACGGCAAAAAGTAACAGACGTTAAATCGCGATAAAAAAGCGNNNNNNNNN
NNNNAAATCTTGGACGGACTTTCCCGTCCAAGAACATTCGATTCCACGGC
AAAAAGTAACAGACGTTAAATCGCGATAAAAAAGCGGTTTTCGTCTAACA
GGCTAGGAACAATCTAACTCTGACAATTTTATTTTTAGAGCCCTTACATC
TGCACACAAATTAAGGAGAATAAACAAGTCTATTTCATATTCTTCAATCC
GGGATCAATTTAAAACGATATTGAGTTTACTTGGCTACAACAAAGCACTT
TTTGGTTTACATAGTCTAAGGTCGGGAGGAGTCACGGCGGCAGCTAACCT
TGGTATCAAAGACAGGTTGTTGATGAAGCATGGTCGCTGGAAGTCGGCAA
ATATTAAGAATAATTATATATCCGAGAACTTAGGTAATTTATTGTTTGTT
TCGAAAAATTTAGGGTTATAAAGTATTAATAATGTACGTTTTCAACATTA
CCCTCTACCAGTTTTGAAGCGAAATTTATAAGTTTGTCTCATGCTCTTAG
TCCACAGGCTTTGGTACGGCTCCTACTACCAGAATACAAAAAGCTGTCTC
GAAATCGAGATTTTTGGTGTTCAGTTATTCTTTTTCCCGTTTTCGGTCTT
TTGTGTTTTCCATTTGTGATCTGTGACTTTTCGGAGAATTAGGAAATAAA
TCAATTTATTTTCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009040TCONS_00009040Clytia hemisphaericatranscript
TCONS_00009039TCONS_00009039Clytia hemisphaericatranscript
TCONS_00009038TCONS_00009038Clytia hemisphaericatranscript
TCONS_00009037TCONS_00009037Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009040-proteinTCONS_00009040-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:468266..475431 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.09	5.31	2.64	2.69	1.15	0.86	1.82	2.04	0.9	1.32	0.62	1.42	1.8	1.3	1.86	2.69	2.48	1.75	2.24	1.18	1.72	2.04	4.64	3.86	2.67	2.24	1	1.24	6.61	3.5