XLOC_005155 (gene) - C. hemisphaerica

Overview
NameXLOC_005155
Unique NameXLOC_005155
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:35342..42053+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005155 ID=XLOC_005155|Name=XLOC_005155|organism=Clytia hemisphaerica|type=gene|length=6712bp|location=Sequence derived from alignment at sc0000091:35342..42053+ (Clytia hemisphaerica)
CCCTTCCAATGCCATAATCCATATAACCCATCATGGCTGCAAATTTTCTA CGTCCTTCGTGCTGAATGTGATTGTACTTTCGTATCCATGAATCGGGGGC TTGCAGTGCATCTGCATCCCTATTAGCACTGTGAACCGCTTGATATGCGA GGTATAAGAAAAGTGGTTTCGATTGGTCATGATTGTGTATACGACCTTCT GCTTCTGCTGTATACATCTCCGTACTGTAGTTACCCCATTGTGTCCATAC AGgctaaaatgacaaaaaaatcagaaagttatTAATAGCAGGAAAGTACT GATACTGGTGATATCTTCGGACGCTCCAGTAAAACTCAGGGAAGACAGTA TTGCGGTAATAACAGAATTGGCCCCTCCCCCTAACCTTAATTATTTCTTA GCTTTGAGCTTATAGCCCTTAGAGCTTCTCGATGAGTGTCATTGTTCATA GTATCTTTTCTACCTTGTTTGAAGGTCTCAGGTGAAGTTGGAATCAACTG GAacataaaacaaacaatattgaCGAAGCTCATGACaccaattttgattt caaaagggAGTAGTGGGCAATAACATCAGGACCACTGACCTCTAAATTGT CATGTAGATCGAGCCCCCAGTACTTCTCGTTATTGGAGTGGTCCCAATAA TCAGCTTTCCCAAGGTAGTAGCCATAAAACGAATCAAAGCCTCTGTATGT TGGAGTGTATTCTTTCGCAAACATACCAACATGCCACTAAGAAATAAAAT GACGGAAAGTTTGGATTTTATGGATTATATATTTCATTCTTGGGGTAGAG TGCATTCATTTCTCAAGAAGATCCAACTTTGACTCTCTAAAAGATTGTGA ACATTGCTTCTCGAATCATAGAACGCGTGCAATACTAATaagtcaaacaa agaaaaaaaagcatCTCTCACAGGATGAAAAAATCTCCGAATGTTAATAC ACGACATACCTTGCCGATAGCATGCGTTGCATATCCCTGTTCTTTGAGAA TCTCTGGTAAGAATGTTTCATTTAAACTGACACCCCATGTGTCATATGCA AATATTGTGCTTACTTGCATACCTGAACATCAAAAGTAGAAATACTATAA TTAGACCATATCCAACCCCCTCAAAACATTTCATTCTTTCTTATTTGTCA ATGGCTTTTGCAACTGGCGCTGGTCAGTTTGAGAGTACTGACTTGAAATT TAAACGTTAGCAAGCTTGAAAACCTTGCTTGGTATTTCTTGTAATAATGA TACAGAAATTTTCGTGTTTTATTGAAATTAAATCCTATGAACTTGATAAG AAAATAATCAACCTGTATGAATAGGGTATCTCCCAGTCATGATGGCACTC CGAGATGGTGAGCATATAGGTGCAACAtaataattattcaaaataattcC TTCTTTTGCCAATTTATCAATGTTAGGTGTTGGGATTTGATCTGATCCGT GGAAGCTGACATCATTCCATCCCTTTGGTGGAAAAGCAGACATTAGAAAA GGCTAACACAAATTAGTTTAGGTGGATTTTCTCATTGACCAaagcttttc aaattttattaagCCCAGGGTCATAGGTCTGTTGTAGAATGGTGAGATTG TCCAACCCCTGAATTAACGCCCCTTTCAATTAAGGGACTCAATTTCTACG ATTCatgaatttgtaaaaaattacaACAGAATTTGGAGATCTTAAGGTTC GCACATTTGAGATCTTAAGATTTTGCTTCAGGATTATAGCATCCCTTTCT TCTATTAGATTTTTGGGTTTACCTATGGTTCAATTTGTCGTGTTCTTACC AAGTCGTCAGCTACGATAATAACAAAGTTTGGTTTCTCTGCGCACAAAAT TTGACCAACGAGGGAAGCTACCAAGAAAAATTGCCATAAAATTGCCTTCA TTTTGTCATTTAACTATTTACCCTGTGTTAAGAGTTGTCTATTAAGATAA ATCTCAATATTATGTGTGGAGATATTACAACAAATTTATACAGTTCACAA GgttgaaactgaaaaaaattgttagCAATGAacgtaaaataaaaaacttg ctCAAAAAGATCAAGATCATATGACAGAAAGTTGTTACAAGACTTTataa ttaaaatgttttctcaCTAAGTTACATCGCACTCACATTGTATttatcta aaaatttgaaatgcgtatcaaaatgacatatatgaaataaaactgaaaaa ttgtcaaaaacgGTGAGAAATTATTTAAAGACAACATCATAACATGGGGA GATTAGAAAAACCTTATGACAGTTAGAttttaattgtatttttggcAGTA TCAAGTATGCATACATATCGATGATGTCATCTTGTATAAAAAATCAGTGT GTCGAGCTTAGGAGCATGtcattgagtagaaaagtttgtgtgtctGTATC TCTAAAATATGAGAAAGTACTCCGCCATCATACAGGCTTATTACAGGCTA AAAGTTAGTTTTAAAGTATTAATCAATAGCACTTTTTATTACTCCGTTCT ATCATGCACCAAATGTTCAACCCAAGGATTAGATCGTCTGTTTTTGTCAT CATTATATATCTTTTAGGTATATGTAAGAGTAGGAATTGCgaagtcaaaa ttttcaaaaaaggttccCACCGTCCAAAGGAGAGGAGAGTTTAAAGATAT ACATTTAAAGAGAAAATGAATGACACACACTTCAATTACGTCACCAACAA GTTGATTCTTGAGCATAATGTGTgttcttttgaaaatctaaCACCTTGCT CTTGACAACCCTTCCTACAGTGAAGTGAAAGTGAATCGATTAAACTCTAA ATAAACTCTTTACACATAAACTCTAAAAACTACACATAATTATAAGGAGT AATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttgttat gttttcaacagtaaacgaaagtgaatgaagacaaaatgtaaacaaaaaga ttgcaaagaCGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTAtgatccag cactcctaaatactcctccgtatgggtgtttgtgccaatgctagatcagc atttcataaatataccatgcgtcgttccctttaaAGTCTAAATTCAAAAA TGCATCGATGGACGACGAAATGTAGCACAGTTTTTTAGTGGCTCTAGGTG TTAGGTCTAGGACCCTACAAACCTTACGAATAACAATAATCCTTTTAAGA ATCAATTTCTTGACTTTGGTTTTAAGGTAGAGTGATCCAAGGTACCCATA CACCGTTATGGAGCTTTGGGTTTGCTCTGGGGTCCCCTGTCTCATTTCTT CTTGGTGGAACTGCACTATCTTCATAAAattgtaatcttttcttcatcGT TTCCAGAAGTTCAGGATATTTGCCTGACAAATCATGATATTCGCAAGGAT CGTCGATGATGTTGAATAAACAGAAATTGGGTTTCTTAAAACACGTGCTC GAAACATTGGCAGGTTTAGCACCACAGTTGACCACTAGTTGACTGTGGAA TGTGATATAAGGGTCGTCAACCAGAATATTGTTTTCCATACCAATAACCC CTGGCGGGGCATACCAACCGTCCCATGTACCAGCTAAAAAGGAAAGATAA AGGAGATAATATTGTTTATCTAATTTTTAAAAGGCAAGAACAATAAACAT TAATTGTTTCAACATTGATGATTGATTAAAATCGATTACAGTATATTAAA ATAGCTttttagaagaaaaatattttcacattCAAAAATATACTTGAAAG TAAAAGAATCTGACCGTCGGGGAAAATTGATTGACCACGTTATTATACAG CGACACTTGTATATTTTGTAGTTAGTATCTAACGAAACACACAATATCAA TAAGAATAGAAAACAATAATCTTATCCCACCTTTTCTTTTCGCTAAGGAC ACTACCTTTTTTAATCTACAACTCAATAAAACTGATGCTGTATTGCTAGC GTACAAAAGAAAgcatggaaaaaaaatcaaaaccatcaTACTTTCTTGTA TAATTTTCCAATCACCCATTCGTAAAGCTCTATTTTTCCAGTCATGGTGA TCAATATTCAGCAAAATCTCTTCTCTAGCAGAAGGTAGACCTTCAGATAA ACAAGGCCATTGATCCACACCATCAAAGGGagcttttgaagatccacctg CTAAATTGACCAGCGTTGGAACCCAATCGGTAATGTGTATTAAGTCCATG GATGTTCGACCTGGCTTCTTTAACAAGTTACTATGAACAAATCCAGCCGC TCGCACACCTccttaaaataataaaaagtcaAAGGTCCGTAAAATTTCGC TGGTTTTCTGACTTCTTAAAAAATAGTTTATTCGTTCAAGATTCAATAGA TGAAATTGCAAGTAATTTGAAAGTGGTTGAGTAGCTTAAAGGAGAGCTTT TGATCTTATGAATTCGACTTAAGAATCATACAGCAACAGGTAAGACCTTC TCCAAGATGtctgaaaatatcaaaacaacgTCTAGCTAACGCCTATAACG CCCTTAAAACGTTAAATGGATGCTGAAACGAAGTTGGAATAGCGCTCGGG CCGTACCTTCCCATAGCGTAGCCTTGACACCTCTTAAAGGGAAATTATTG GCCCAGTTTGCGTCAAAACCATTAGCAGGACCTCCGTTATCTGTGGTGAA AATGATGACTGTGTTATTGATCATGCCTGTCTTTACCAGAGCATCGTGGA CCTGTGGCAAcgaaaaaacatgaaattttgttttaagaGGTTTGGCCGAT ATAAAATTTGCGTAAATGGTTGAGCTTTGGACTGANttttatgttttgat gatttcgacagacgattcgtgattcggataaaaatgttcgatcatcgttc gacgaatatccttcgattttattaaggcaccatttacactagaataacta gaatgaaaaaaagagcgatgcgcgggtggcggcgggtgttgtgccgccgt ggattatgtggtgtgtttgggcattaaggctcttacgaacCTGTCtcata gcggctttattagagggatttttagagtgtctcttattttgctaaNgatc ggagtttttttgaaaatggtatcctaatggcggcactactcataTATGTA GTTTTGAGTGCATCGAGAGCACTAGATCTACTTTTTGcaaagcgaattta tgagcgaagaaGTTTTGCTATttgtgtgcacgtacctttaacttctatcc caagcgaaaatttgctataaaatttgctatataaatcacatcttcaaacc gatgattttatcaaaatgaccttgaatggtttggcttgaagccacgaaaa ctttctcggtttggtagctaggactgcgaaagaagccgttttaaaatggt gtaccctagcagtgaacagcaataAAGTTACCgcaagccgaaacacggac ttagaatctgaagttgatcaaattgcgNacccttatacaatacggctagt tctcgaatacttttgatgatgtagcgccgttagacgttaatttttaacat tgcaatggcttcttctcgggaaccaattccaaaaaaaaaccaatcaaaga tggcggatatagcttggtccatggatatataaaggtcagtgggtttCACT CTGTAATAAGCTATATATTGGTCAGGTACATgagtaaatttatggtaaat aTTGTTTTGTTCGGAAGTATGGTTGAGTTGCTAAATAGCAAGGAAATTTA GATGGCAGTAAAATTCAGCATAATATAAGCATTGNtaagcaatctaagca gtggttcttcggttttaaatgtttattttgctgttaaatggaaaaaaatt agtttgaacggtgacagaaaggatctttatcatcccttgacttttaacag caagtatcaagtataaAAAACCTCTCCTCAATGaggagaggtttttgcaa gtcgcgcgggcggaaggagtgctcttttagNTAACCCATCATAGCTGCAA ATTTTCTACGTCCTTCGTGCTGAATGTAATTATACTTTCGTATCCATGAA TCGGGGGCTTGCAGTGCATCTGCGTCCCTATTAGCACTGTGAACCGCTTG ATATGCGAGGTATAAGAAGAGTGGTTTCGATTGGTCATGATTGTGTATAC GACCTTCTGCTTCAGCTGTGTACATCTCCGTACTGTAGTTACCCCATTGT GTGTATACCGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009181TCONS_00009181Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:35342..42053 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.59 0 0.97 0 0 0 3.18 5.09 7.77 11.81 10.71 18.53 5.55 8.22 9.47 1.87 6.34 9.61 14.18 12.8 2.98 8.25 3.94 0 0.01 0 4.9 5.97