XLOC_005216 (gene) - C. hemisphaerica

Overview
NameXLOC_005216
Unique NameXLOC_005216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:459497..466538-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005216 ID=XLOC_005216|Name=XLOC_005216|organism=Clytia hemisphaerica|type=gene|length=7042bp|location=Sequence derived from alignment at sc0000091:459497..466538- (Clytia hemisphaerica)
CTTATCGTCACCGTTATCGCTCAACATCTTATTTAGCATCCGAAAGAAAT TAGAAAGTTCCTTCAATAAACTGCGCGAGTCAGGATTTGTGATGAAGAGC ATCAGTATTTCATTTGAACATTTCTTCATCAGATATTGAATCTTTTCGAG CACCCTTTTGTCATTGTTAACTGTCCATGATCCAATGAGATCACCAATTG TTGTATCTTTCGTTGCTGGAAAGATAATGAGTTTTCGTTGACAAATTTGC GACAGATGTCGAACCAAAGACGTCTTGCCAGCTGAGTTCCCCCCTTGAAT GAGAATAGCAAGCCCTGTGTGAATTGCCGCAGCCAAATCTACAAGGTTTT GACAGATAAAGGGTGAATTTGTGAATGAAATGGGGGAAATTTGGTCTCCT TTCTTGACATAAAGATGCCCAATACGTGCGAATTCCCTCATTCCAGTATC AACAGTGAATTTAGTATTTGAATGGACTGATGCTGAAAATATCTTTGTGA TTTCATCTTGTACCAAGGTTTGGTTATTTTCTTTATCAACGCGCATTCCG TATATCAGGTTGAGGTTTGTTCTTATGCATTCTTTTTGTATTTCCTTGCT TTCGAAAGTCTCAGCATGATCTGTCTCTCCAAGCCTGTGAAATTCTGATG TTTTTTCCATTAATAATATGAATTTTTCAAGATCACGAAGATTGAATGTA TCTTGCATCGAGTTGGTATTTTTCACTTTTCGGCTGATGTTATTGTGAAA TTCAAGTATTTTTTCAGCGTTACTATCACTGATTATACCATTTTCTTTGG CAGATTTCATCTTGAAATTACCGATGTCTTTCAGCTCACTCTCGTCAAAA GGTGCCAGAAAGATCTTTGTGAAACAAGCATCTATAGCATCTGGTAATTT GTTTCTACCACCTCCAATCTTCTCTGGGTTCTTTGTCGCGAAAATCTGAA GGTTCTTCAAAGGGACGATCTCGTTTGTTGATTCGTTGCGAAACTCTTTA GCTCCAGTAAACAATGGCATCAATCTTTGAAGCAATGATGGATCAGCTAG ATTCAATTCATCGAACAAAATCCAAGTGGTTTCAGATTCCTTCATAGCTG TCAGTAAGATTCCTTCTTGAAATTTGATCGTCCGTCTACTTTCGTCTTCC TCAACAATGGGTAAAAAGCTCCCGATTAGGTCATCGTAAGTTGTGTTGGC ACTGAAGTTGATTCGTGTGCATTTGAAACCTAAAGCATTAGACAGTTGTT TGATGATCTTTGTCTTCCCAACACCCGGTGGCCCATTCAAAAGCAGTTTC AGGCCACTGGCTGACGCAGCAAATATTCGACAGACGTTTCTGAAGGTTGA TTTCGACAAAAAGAGATCCATGTTTGATTTTCCGCTCAATTTGAAAGTTG GTGATGTTGGGCAGATCAGTGGGGTGTTAGTTATTTTCGCAACTTTGTCA ATGGTACTGATTTCAATTAAATTGTTGTCTCCCGAATCCGTTTCAAACTT TTCGTTTTCGAAATTTTTTCCTTTCACAATAGAAATCATTGATTCTTCTG TCTCCAGATCAAAAGTCTTCAAAACAAACTTGTATGGGTGAGGAATGTCT TTGCTGTCGTAATTGAAAGGAATTCGATCAACCCATAAGTATATGATGCC GATGGCAAGAATTTCCTTAAAATGACTTTTTTTGATGCTAAATAAGCGAT CAACAAAATTTTTGAGGCGGAAAACATCTTTGGACGTTATTTTGAAGAAC GGTTGTATTCTTCTCAAGGCCTGTCCTATCTTTTGCTGAATTTCATCCAT GTTTTCGCAGGAAAACTTGAGCATGCTCACCAGTTCACTGTCGGTGTAAG CTTTAGTCTCGATTACCGTCATTCGTGATCTCAGTGCTGGACTAAACTTA AGTTTCTTGCCAACTCCTTTGGTATTAACAGTGCCGATGATTTTCAAAGA TTTTGGGACAGTCAGTTCACCACTAAAGCCTTCGGCTATTTCTTTGGATG ATAAGGTGAAATCTTCATTGAGACAAAACTCTGCTTCTAGAGGCTCCAGC AAACTATTCAACCTTTCGATGACAGCTTGTGATGGCAGGTTTAGATCTCT CATCACCAATACAGAACCATCCTTTACAGCTTTAGTGCATGGCCCATCCT GGAATAAAAAGATTTGCACTTCAGAATCCGGGTCCTCGACGATGCGTTGA ATCTCGTAAAGAATCTTGGTTAACCTTTGATAAATGAAAACCAATGTTTT AAGTTCTCTCTGTGACACAATCCCTGCCAAACATTTCATAATTACAGTCA TCTTTTCTATCAGTTCTTCAAGAACTATTGAACATGTCATATAACCTCCT CTTGTAGCTTCCGATGTTTCCGAGACTTGATAAGCATCGTCATACTTTAA ACTGGATTCCATTATTTCTTTGAAATCATCGGTCATTTCATCATCACTAC TATTCACACCACCGATTACACTTCTTTCATTAACAGCTTCTTTTCTATCA ACATGTTTCATTTCATTATCCACAGGTTCACTGGATTCATTTTCATTGTC ACTGCTTTCGCTTTCACTGCTGCTCAAAAATCCAATTCCTGGTCTTGAAT CTTCCATTTCGTTTTTTTCCAGTTGTCTTCGTTTTTTGTTATATTCAGTG TCGGTTTCAGCGTCATTGCAATTCTCATCATCCTCCTCTTTGCTTGTACT ATTATCGTTTTGAACGTTGTCAGAAATGTCTTCTGTGGTATGATCGCTAT GCTGGTCAATCGTTCCTGTCGATTCTTTCTTGTTACTGACTTCCTTCTCT GGAGGTTTGTTGTTGCTGTATTGGATTTCGTCGACCTTGCTGCTATCTGT TTCCAGGCTTTGAACAGCAGATTCAAAAATTTTCAACTTTTTCTCCGCAG ATTCCAGTCTTTGGTCGTAGAAAGAGGCATCATCGTAGCTTGAGTGTTGA GCTACAAGTTGTTTACAGTAATTCAAATATTGCTTGGAATTGGTGATAGC CAGTTTAAGGCATTCAATTTCTGAATATGGGCGGAGTCTCCCTAACATAT CTGCTGAGTCGGTAGAGTTGTTACAGAGAATATATTCCACATCGCTGCGG TCTTTCATCTTTATCCAGGTGGAGATTAAATGCGACTTGTAGGATGTTGG TCCCATTAAAAGGATAGATTCATTGCATTCTAGAGCGACGCAAACATTCC ATAAGTCTTCTTGGAAACTCTGGGTAGACCTTTTGATCTCTTCTTTCAAT TCATCTGATATCCATAGCACGTTAGCCATTTTAACAGAAACGTGTGGGTT GTTAGTATTCACCAACTTTCCGAATTCGTCAACGAAAATCTCAGGCTGAA CGCGATTCAAATCTCCATCAAAAGCAAAGTCATCGAAAGTCTCCTTGAAT ATTTTTGCAAGAACCATTCGTCCATCTCTATCCTTAATACGACAGTAAAG CAACTCGAAGCCGAGCAGGCTGAGCTTTGCTGCAGGAAACACTTCCTTTC GATTTAACCATTTTAACAGATCTCGTAAAGTTAAGTTGACTTGGCGTCTA AATTGGTTAGATCTTTCAGTGGGTGAATTTATTTTGCTAAATATCTTGGC GAATTTCTCAGCATCTGCATCGAGTATTTTCGCATCATCAGTGGATAAAT ATGAAATCTTTTTTGAGATTATTGCTTTTATTTCGTCTTCAGTGAATTCT TGGAAATAGACTTCTGAAAATCTTGATCGTAAACTTTTTGGCAGCTCTTT TCGTCCGGGATAAGACACTCCATTTTGTGCTGCAATGAAACGAAAGTTTG GATGGGCTGATATCACACGACTGCTGTTTGGGATGGTGATTTGCTTCTTT CCTTCCAGCNCTTTGAAATCATCGGTCATTTCATCATCACTACTATTCAC ACCACCGATTACACTTCTTTCATTAACAGCTTCTTTTCTATCAACATGTT TCATTTCATTATCCACAGGTTCACTGGATTCATTTTCATTGTCACTGCTT TCGCTTTCACTGCTGCTCAAAAATCCAATTCCTGGTCTTGAATCTTCCAT TTCGTTTTTTTCCAGTTGTCTTCGTTTTTTGTTATATTCAGTGTCGGTTT CAGCGTCATTGCAATTCTCATCATCCTCCTCTTTGCTTGTACTATTATCG TTTTGAACGTTGTCAGAAATGTCTTCTGTGGTATGATCGCTATGCTGGTC AATCGTTCCTGTCGATTCTTTCTTGTTACTGACTTCCTTCTCTGGAGGTT TGTTGTTGCTGTATTGGATTTCGTCGACCTTGCTGCTATCTGTTTCCAGG CTTTGAACAGCAGATTCAAAAATTTTCAACTTTTTCTCCGCAGATTCCAG TCTTTGGTCGTAGAAAGAGGCATCATCGTAGCTTGAGTGTTGAGCTACAA GTTGTTTACAGTAATTCAAATATTGCTTGGAATTGGTGATAGCCAGTTTA AGGCATTCAATTTCTGAATATGGGCGGAGTCTCCCTAACATATCTGCTGA GTCGGTAGAGTTGTTACAGAGAATATATTCCACATCGCTGCGGTCTTTCA TCTTTATCCAGGTGGAGATTAAATGCGACTTGTAGGATGTTGGTCCCATT AAAAGGATAGATTCATTGCATTCTAGAGCGACGCAAACATTCCATAAGTC TTCTTGGAAACTCTGGGTAGACCTTTTGATCTCTTCTTTCAATTCATCTG ATATCCATAGCACGTTAGCCATTTTAACAGAAACGTGTGGGTTGTTAGTA TTCACCAACTTTCCGAATTCGTCAACGAAAATCTCAGGCTGAACGCGATT CAAATCTCCATCAAAAGCAAAGTCATCGAAAGTCTCCTTGAATATTTTTG CAAGAACCATTCGTCCATCTCTATCCTTAATACGACAGTAAAGCAACTCG AAGCCGAGCAGGCTGAGCTTTGCTGCAGGAAACACTTCCTTTCGATTTAA CCATTTTAACAGATCTCGTAAAGTTAAGTTGACTTGGCGTCTAAATTGGT TAGATCTTTCAGTGGGTGAATTTATTTTGCTAAATATCTTGGCGAATTTC TCAGCATCTGCATCGAGTATTTTCGCATCATCAGTGGATAAATATGAAAT CTTTTTTGAGATTATTGCTTTTATTTCGTCTTCAGTGAATTCTTGGAAAT TGACTTCTGAAAATCTTGATCGTAAACTTTTTGGCAGCTCTTTTCGTCCG GGATAAGATACTCCATTTTGGGCTGCAATGAAACGGAAGTTTGGATGGGC TGATATCACACGACTGCTGTTTGGGATGGTGATTTGCTTCTTTCCTTCCA GTAATGGGTAAAGCATATTCATAACTGCTGGCTCAGCAAGATCAAACTCG TCGGCTAGAAAATAATGGCCTTTCTCCATAGCTTCAACAAGTGGACCTTT TGAGTATGCTCCCCCAGGCAGAAAGGAGCCAACATAATCACTCATTGTTG TGCTTTCAGTATTGTTAATGTATTCCAATTTCAGTTTGTTTATTTTAGCG ATATGCTTAACCAAGCTTGATTTTCCGCAGGAAGCAGGTCCTTCAAGTAA GCAAGGGTAATCACAAAAGAAAGCGATTGATAACTTGCAAGCAATTTCAT ATCTTGATGAAGAAGCAGCTTTTGAGATAATGTAAGAACCATCTTTGTCA CCTTCTGGATCCAAGTTCAGAAGTTCTCCGTACTTGGTTAAATCACACGA GTATTGTGGGAAGAAATCGAAAATCACCTTTTCAATTTCATCTCGATCTT CTCTTTGAAACATTCCCAGTAGATGGAGTTCGATGCCAGTGAAAAGTTCA AAGATAGGATCAACATTGAACTTTGATTCAACAAGTTTGTTTGCAGTTTT AACGACTCTCTCAAAATGATGCAGTGTGACAACCTTCTTATCCGATATCG ATCTAACTTTATCAAACATTTGAGTGAATGTTTTAGCGTGTTTCTTCAAA ACATCATCTGCCATCACGTTGTACATGAGCAAAAGAGAGTCAATCGATTT AAGCGTATTTTTCATGTGGATAATACTGAATCGATTGTACAAAGCAGGAG AAAGTTCAGCATTTGTAGTAATGTTTGCACCAGAAAGATGCTCAGATAGT TTACTTCGTGGAGGTGTCATCGTTGCGAATACTCGAAAGTCGTCAGCCGG GTTTTGATTGACTTCTTCCTCTTTTAGTCCAACATTTTCTGTGGTTAACC ATTGCGGTGGAGTTTCAAGAACAGAATTCAACCTTTCCAAAACAGTACTC TGTGCTTCAGATATGTTCTCGATAACAAGCCAATATCCCTCTTTGTAAGC TTTAGTAACAATACCATCAGACCAAGCGACGACCTTTTCTTTGTCTGGTT CATTTTGGCCAACCAAAGCCTCTGATTCAGTTTCTGGTGTAACGTAGAGA TGTATAACTTTCTTGCCACAAAGTCTTGCCAGCACATCGATGGTCGTTGA TTTTCCACAACCGCTATCACCAGTCAAGAGAACAGGTTGCTTGAAGTGCA CTGCATCGATCATCTCTTTCCAACATTCTTGCATTTCCTCAGTGATTGCT TTGGTCCCTTGAAAGCTGCCCACTTCAGACTTAACATCGGGAATTTGAAA ATTGCCCGCCATCGATTGACCAATAACATCTTTGATAAGAGTCTTCTCGC TATTGGAATTGACAAGGCTTTGATATTTTTTGAGAATGGCTTCCAATTTT TCATTCAAATCAAGGTTTGACAACATTGTGCTTATCGTCCATTGGTATAA ATCGTATCCAATATTTAGTACCTCTTTTTCGTTTAAATGCTTTGGTATTA ACTCTTCTAAAATACTTTGATATAATTGATTGCTAAAAGCAACCGAATTT CTTTTATCCTCTAGATAAAAGCTAGGTTTCATATTCTGGCTTGAGATATA ACCTTTAAGTTCTGTTCCATTGATCAGGTTATAATTTTTCATGTCGATTT GAATCTGAAGTATCCTTTGGATTGCATTTTTGATTGTCTCTTGGTTTTCC ACCTTTCGTAAACGTGATGCGTAGACAGAATATGCAGCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009324TCONS_00009324Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009324-proteinTCONS_00009324-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:459497..466538 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.03 0.04 0.03 0.14 0.09 0.06 0.09 0.03 0.04 0.01 0.03 0.08 0.07 0 0.04 0 0.01 0.02 0.02 0.03 0.02 0 0.04 0.23 0.31 0.01 0 0.02 0