XLOC_005239 (gene) - C. hemisphaerica

Overview
NameXLOC_005239
Unique NameXLOC_005239
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:181081..192759+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005239 ID=XLOC_005239|Name=XLOC_005239|organism=Clytia hemisphaerica|type=gene|length=11679bp|location=Sequence derived from alignment at sc0000093:181081..192759+ (Clytia hemisphaerica)
ttttcagtTATATTATAAACATTAAAATGATAACAAGAAAGTTTTTACAA GATTGTGGCAaatatgtgaaaaataaccttCAATCAATGTGGAAAGGCTT CAAAGGTGAAAATATCATGATGGAAGATGTAAAAGTACTTTATGATTTTG TTAAACcagaaacaattaaaaattttgatcttATTACTGATATAGATGTC GGTGGAAAAAGTACAGCAAGCTTAACGACTAGTGTCAATGGGCGACTGAT GATAAAAGGTGACTTGTCAACTGAGCTAGATAAAGGATTGAAAGTAGATC ATAGTGGATTTTGTGGGATACGATCACAACCTGTTATTGGATTATTCAAT AAGGTCGAAACGACTGACATGACTTATTATGATGCAGTGGATATCAAATA CAGAGGAGATGGTCGTTGTTATTTTGTCAATCTACAAACAGAATCAATGT TGCTTCTTAACCAGTATGATTTATTTCAAGCTTTTTTGTTCACCAAAGGT GGACCGTATTGGGAAGTTGAACGAATCCCTTTCACCAAGTTTCTAATGAC TTACCAAGGTTACCTGCAAGATGAACAAGTTGATTTTGCTAATATTCGAA CACTTGGTGTTTCCATCAgtgataaaaataatggacCTTTTGgacttgaa attgaatatattaaGTTGGTCAAAGTGGGCCACCAGCCACAAATATTTAA GCATCAAAAGTATAAGCGCTTTGAGAAGtattagatttattttttcattt gttttcaatagattttatattttgtgtatttttgtATGATATAGTTACag ctaaattgaaaattttaaaatgaaataggTGAAATCTTGATAATTATCTC GTTTGATTGCATTTTATTTCTTTNGGGTACCTACAAGATGAACAAGTTGA TTTTGCTAATATTCGAACCCTTGGTGTTTCCATCAGCGATAAAAATAATG GACCTTTTGgacttgaaattgaatatatcaAGTTGGTCAAAGTGGGCCAC CAGCCACAAATATTTAAGCATCAAAAGTATAAGCGCTTTGAGAAGTATTa gatttgttttttcatttgttttcaatagattttatattttgtgtattttt gtATGATATAGTTACagctaaattgaaaattttaaaatgaaataggTGAA ATATTGATAATTATCTCGTTTGATTGCATTTTATTTCTTTCAAACGACTG TAGTTAATGCTTGTTAAGAATTATGACCCGTCGTTATCCCTTGTTAAATA TATTACCCTGTCTAATTTTATGTTTTCAATTGAAAACACTTTGGAACCTT AAAGAACACAACAGGATTTAGAATACCacacattttctttttattttcag aaaataatgTCTGAAACTAAACACAAACAGAAAAATGGGtccaaagaaga aaaatgaaaaaggaagtaaaaagaagaaagatgaaAAGTCAAAAGAGCAA ATTGAAATTACAAACAAGTTGAAATTACTCTTGAAAGACTATGAGAAACA ATGTTCATTATTGAAATCAACAGCAGATCCTGCTCTAAAAGCTACACTGA AAGACTTTACAACTGAAGGGAAATACCTAACTCGGGTAAGTTCCGTGTAT TAAAAATCTTAGTTTTACGTACCTTTAGGGAACTTagtttggcgggaact aattttggtgagcggcaaaagtcttaaaaatttttaattttggtgggaac taattttggcgagtcaacgaaatttttaattttggtgaggactaattttg gcgaatgacagcgtaaatctgttctattttgccttactttgagcaatttt gatgaatttcaggggttattaggcaaggaaacaaaaaatttaatttattt tggcgagtgagcaaaatatttaattttggcgggaactaattttggcgaat tttgtctaaattcgccaaatccgccaaaattagttcccgtcaaaataagt tcccttaaggtaagtgTTTCAGTTTCACATCAAACACGTGTTTTATATCA GGCCGGTGTCTCTCCTAATGTTTTATGGTTGTGTTCGATCtcgtgctgaa taaacaaaaaaatgtttttctttccttctttctaaccaatattgctccac atctgtgtcaattcaatgtgaaaaaagtttgtgatataaaattgatgagt aagcaaacgatattaacttagtttaaaggttttattttttcataagtgtt cccgtttcatatcagacacatatttcatatcaggacagtgtcttgctatt gttatattatgctgatccaagcaaaaaatgtttttcttttcctctttctg accaatcttgctccacatccgtgtcaatccaatgtgaaataGCTTGTGAa ctaaaattgatgagtaagcaaacgataccaCTCTTTAAAAGCAAtgtttt tcgtttattttgaataGTTTTTAAAAACTGTAAATTTTATAATTCCTGTC TTGATTTTTTAGTAGGCATAGTTACTCGATAGATCCTTAAAGATACCACT AGAGTTttcagtgttaaaagttcttccgtctcagacagATTTCCGTCTCA GAGAAGTATATAGAGAgacttttccgtctcaaaatccttcataattcacc aaaagttcaagaatatgtgctaatttgctgtgtaaaatccattttccgtc tcaaacgaaaatcttgctttgaccactgagtTTTATAAAATACTTATTCT TCTATATATTTTCACATAATAGTTTATTCTGAGAGGTGCTCCGATTGTTG ACGATACAACCAAAAATCTTCTCATCACAGATATCAACCAAACCCAAAAC GATGAAGAAAAATACCTAGTCAAAATACATCCTCTTATTAAATCGCTTCG AAACCACTGGTATAAAACAGCCAAAGAATTTTATTTCTGGGATTTGGATA TCCCAAGAGAAGACATTTCAGAACTGGTATGGGTTTTTACTTGATTTCTT TACAGAAATGAAAGAGTAAAAtggatacacgctttttttataagaaccaa taaattttggttcaggctgggctgttcttattttttgagattctaAGGTT TAAATGTTTTAAGATGTTCTGaatacgcttagtttctttacttacaCATT GAAAATGAGTTTTATATCTTTCTTATTAGTGTCTGAAATCTAacgctcag attgttcttaatttgttctaagGTTTTGGCCGATTTTCatcctcgtgttc ttataaactgttctgaaaaaaaaaaagcgtcTTCTACAAGTACTACAGTA ATTACACGTAAAATCGTCAAGAGATAAATGAATTGCATTTTAGGCTCTTA CTTTTTAAGTTGGGTGACATGACGATTTATTTTAAAGCCGGGAATAGAAT TGAATCTCCTGGAAAATGAGACTGTTTATTTCCAAAACGCGTGCGTGGCC TatgtggttttcacacaaacgccggaCTTTGATTAAAATTCGAATGGATA TAACTAAGCCAGGGATATTTGTTTCTTTTAGGATTAATTGATAAATCTTT GATTATTGAGAGTTGTTTATCATCTTTCAGGTCACTTACTTGAGTCATCG AAGTTACAACGTCGAATATATCGAGTTCCTTGATTGTAAGATTGAGTGGT TTACGCTGAAAGCTTTTTCAAGGTAGATTGAAAAACTAGTGTTACCCGGG GGAGGGGCAGTGGGTTCACAAACTGGCAGTATGTGTAGTGCAAAAATTGG CTTCTGGAATCGAACCCGCAGATTTTTTTCCCGTCAACGGACGCAGACCT GAATTAGCGGTcgcagacctgatttagcggccgaagacctgaattaaaaa CCGAAGAAATGACGCAGCGGTCGAATACCTTttttaacggccgaagacct ggagAAAATGCATTGTGGAAATTtgttataaatcttttttataaattcaa tcaagatttttatatgatgtttcaatgggaaatagtattgaaaacaaatt aagttaaaagatttttaactaaaaagaatgaaaattaatgCCAATAACTT GTCTCGAACTACACCATCTTTCGTCTTCGATACCACTGCACTAACCACTG GACCATCNAGAATTACACCATCTTTCGTCTTCGATACCACTGCACTAACC ACTGGACCATCGCAACTGATTCCATGCCGAGTGGCTAAAGTTTGTTTAAC TGACCCTAACTTATCTATCAGGTATTCGGCCGGTGACttgctaaatcagg tcttcgTCCGAtaaatcaggtcttcggccgctaaatcaggtctgACGGAA AAAAATTTACATCGCACACTTACGGTGCAGCAAAAAACTGAaattcgtac ccttacagtacattttttctcaaattttcagcttttttagagcaaaaata aaatcagaacTTTCTGctggatttgctgaaatttccacccatacagtgca tttatcaaaaagtcgacccttacagtgcatttctgctatcttgaaaaaca tacccttttAACTGCCGTGCATACCTGTCGGTCAATTTACCCGACTCTCC ACCCGACTCTCCACCCAGGGTGTTAACTACcttatgtttttaaaatcaaa acacaaCCTTATCAATTCATTTTGTTgctttcaaagattcctttttCATC GCAGTAAAGAATTATTATTGAAAGTCTGAAAAGTTttacctttcaaaatt ttttcgatgttttcatattttcttacatAGTTGTTTTGCTGTCAACGAAA CATTAACTTCAGTTGTGCTGGACTATACCAAGTAAGTAAATACTGTCtgc tatgatttttttttttttgaaaaaacacaaTTCGCctaatagtagggggc caagtcTCAGGTCCCGTGGCAACTTTTATAGGACTAAACGAAACCTGTTC CATTTCAAAATTTAGTATATAATTAGAATTTTTTGAGAAGAGTCAAATTT TTAAGGCCCGGGAAAATCTtttgtgaccaaaatagtgacgccataggcaa aactgcaagggaaaataaggggtagagaNTTTTTTGTGaccaaaactgca agggaaaataaggggtagacAAATagctttaagaccaactaactgtcagc tctactgtgattttGACGTAAAATCTTGTCTTGAGACTTGCCCCCCCCCT ACTATAacagtacatgttttttttatttataagtattgaaacaaaaatct aaaaactgGCTTGGAGATTATTGAAGGATATTCTAAGCAAAGTTTTATAC CTCACTGCCCGTGCATTTTTAATTGGGGGGAGGGGGACTATGGAACAGAT TTGACTcgactacatgttttttttataagcataacgcttataagcatatg aaggctcagatttgcagaattcctaaacataacataagcatatatgtcag cctgaaatatttttcaagttgtcatttttatcggtttaaaaaggtttggt agaagtcaagtaaaaaaaaagactttccacggtttcctacattccactgc tcccaaaatctgaacaaagtTTTACGAAATTtccgaaatttcactaaaaa cttggctcgaggtgaatcataagcatgattcataagcatataataagcat taagcataaactatgcctgaaTGATttaagaacttaagcatacacgagcc tgaccaaggggcatacaattgcttataaaaaaaaaacatgtattgatATT ATGATGTTGTCTACATTTAATTgcctgtaaatttattttttcagccttaa atttGACGGATTGGTTGGGTTATGTGATGGCTTACAATCAACCAAATCGG TCACCAAGTTAAGTCTGTGTTATTGTCAGCTATCGCCGAAATGTGGCGCC GTTTTGGGTGATCTTGTCTCCAAATCAACTATCAGGTGaattattggact attttttaGAGAATCTTTATCCAACCTCCTCCACTTCAATGTTGAGAATG TCATTTTTGCAAGAAATTTCACTGACCCTCGACTCACGTATTTTTAGGTA CGTAGCCCCTCTTAAATGTAATTATGACCTCCTCGACATTAGGAttattt tctggaatagccaaTCACGAGTTGAGTAATATTTGGTCAAAGAATATTGC CAGAATTAtcatcaaatttgaataaaaccgATGAAATATCATGCTGACGT CAGTGAAAATTACAGTGTATATCATGAAAGTTAAACCAGTTTGGGTATTA CGCAAAAAATCAACCAGTTTTGGACTCCTTTACTTTCGGTTAGTCGGATT AAATAAAAAGAACGAAGGTCTGGGATAAAAAATGTGCTTTGTCTGAAAAT TAAAGCATACGGTTCGGAGTTCTTAATACTAACTTGATTTCAATTTTGCC AATCTTGTCTACAGTGAACTGTACGTGGATGGGAACCAGTTGGAATGCGT AGGACTGATTGACATCttacaaatctttgttgatAAAGCAGAACAAGAAG ccataaaaagaaaagaagaaaagcaAGCCAAGATTGAGTCGGTGGTTGGG ATGTACAGCGAGAATGAAAAGTAAGATAAAATCCATTGACGGGAGAATCT TATCGTGTAAAAACATTTGAATGTCCTCCGTATCTTTTGATGTTGAAATA GTATCAAAGTTAAAAgactttttcaacattttgacgttttttttttagct ttatgCGTACCAACTTCCCCAAGTAggaactttcgcgattttcgcgaatt ttggtctttttcgcgattttcgcgaattttggtctttttcgcgaaagtaa atgcatttgaaaattgattcgcgaaagtttatgctcgcgaaaaattctct aaaaagttgaaaatctatAAAGCttccaaatcaaaatcaaaattattagT TGTTGCATTTCTATGACTTAAAAGCGTCATTGAATTCAAAGAATACCCCT TTTAATCAAATTTAAGGAGTATTTGCGTCacttttaagccattttttggt gaaaattttcattttgatcatccaattcgcgaaagtttatgctcgcgaaa aataatttttactcgaattcgcgaaagtaaatgtcgtaaatttcgcaAAT ATTCGacatcgcgaaagtttgtacgcctaaagtactcgGCTCGAGTATTT AACTTCGATTTTCTTCTGAATCGTGAAGAGTTTGGATTTGACacaatctg ttttttttttctcgaaaaaaattaattacgatcttaattcattatttttt gtttgacgAGGTAGaacttttagaaatttgggTTTACTTATGATTCTTTT ATTGGAATCATTAtcttttctctttctctttatGATTTGCATAACTTTCT AGAAAATCAGCAATATCCACTAAAACTACTGAACCAAACAGCACGAAAAA TGCATCGTCAgctaaaaagaaaggaaaaaagaaagggcggaagaagaaga aatcagCGAAGCCGAAATTGCCGCCCAAATGTGGTGCTTGGTTGAACGTA CTACATGCTTCAGATGTTGGTTTCGATGGTATGTCGACGGATGTGAATGG TAACCTATTGCATCAGAGCTTAATACTCATTCAAAGGTAAACTAAATGGA TTTagatttgctgatttttttatgggcttttttgtttgcttttttcgTTA AGtaaaaaaagccataaaaaGGATCTTGCTACATTGAATAAATCTTGACT GCTTATAGGTTTTCATATCAAACACATtcttcatatcaggacagtgtctg catTTTGTTATATTGGGCTGATATGAGGCTGATATCAGCCAAAAAttgct tttcttttcctctttttgaccaatcttgctccacatccgtgtccaatatc aaaaagctcgtaaatcaaaattgatgagtaagcaaacgatatcactctta tttaaaaacaaaacttttagaGCTAATGTTAGTTTTTAAACTTATTAACT TTCTACGAACGAGTTTCAAATAAAGACAGGAAAAAGGCTCTAACGATgtg aaaattgttcaaatttcACATTAATCTGCTCTAATCCTCATTATAATTTT CTACGTCCCTGTTTTGTTTAGGTAATCTTTATATTATCCCATTCTGCCAC TAAATTGGAAATTCCCTAATGATGACGACTTGAATcactcaatcaatcaa tttccAATGTTCTTTCATTGTTTTCTATTCAGGTGGATCATATTTTCGGA GGATTTAAAGGAGATTGACTTAGACGATAACTTGATCGGTGAATTGGGTG GCCTCGAGATATTATCCGCCCTTCGCCAAAGAAAAGaaggtatatatttt ttagacTTATCTCTAGTTGAGCTATGCATTGGTCTTGTCGAACTCGGTTA GCTGCTTTGCGGTGGTTTAAATTCTCGAGCGATTCGCACCCCTTAAATAT AAAGTTGTGTCAACAAATTACGAGTAATCAGAGAAGAACATCAATCCATA TATGTTCTGCCATGTTTCACCAAATTCGATTGAGCTAAACTTACGAAATC TTTTCGCTTTTTCCCGTCCTGTATATAGGCTTAAAATGCTTAACTGATTT TGCCATCAGTTTGGACGACATAGAgacttgaaaaaagaaaaagtccgTGT TTTATATTTAAAAGTAGATCTGCAAACTCCAGAATAATTGACAATGGTCT TGCGATTAAGAGAATTAACCAGCGTCGGGCGGCTGAAATTGTTTCTGGTC ATGAGCGAAAGTCGGATGTTAAGATGTTCTGATTTAAAGCCACTTCAATG GATTTTGATTTGAAGCCAATTCAGTCAAGCCAATTAATTTCTTCTAATCT TTTTTTGCAGAGGGCTTGAAACCGATTTACATGAAAGTCACTCATCGTAT GGATACCCAAGTCTTCAAAAATATTCTCAGCCTCGCTTCAGGAAAATCAA AACGAGGcgggaagaaaaagaaaaagaagaaaggcaATGGAAAGGTAATC ATCATTCTGAACAaccttactcttaggtgccaaataaacgccccccccgc ttgttaatttttcgatttttttccaacccccccccccgcgNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCCCCCGGTAATTatgtccccccgtttatttaatttgaaaaattttt ccaaccccccctgtttattcgaaccccccccccccccccgttcaTTTGgc ttatttggcacctaagagtacataaTAATCCTGTTAACAATAAAAACACG GTTATCTTTATAATCATGTATTGCTTCATGTTATTTTCCTTTcgtaaaat tttatcaaacgaaaattacttatttttcgaaaattacatTCATTGTTCTA GGGACCCGACCGACCTTGTTATTTtactgaaatttaaaaaatgataatac TGTATCGAATTTCCACTGCTGTAATCgcgttcaaaaaaaaaatgctaATC AAGCAATGGACAAAGGCGACATTTCTGGTTTACTGTTGAATGGCTAAACC CTCATTCCTTAGAAAACTTTCCTGGCGAGTTTCTTTGGTAATTTCCCACT GTTTATTGGTGTTTCAAGCTGTTGGGCCCGAGCCAAAaattttgagggtg taaaataggacccttatggctcgcacataacCAACaaccattttgcctaa gtacacgCACCTGGAGGTACATCGCGTATGCGTATGCGAACATGTACAAA GGCATGGGGAAGTCATGGGGAAGTTTGCGGCTTTGTAACTGATCGCTTCA GTTGATTTTTCACCTTTTAAGAGTCTTGTTCCTTTTTCATTGCAGGGTTG AAATGAGAAGGTTTTCCCGGAAATGCGTTTAGCCGTTGCACGGTAATTTC TTACATGATAGGACACTTTGTGTTACTTTAAATGATCCCTTTTAACAGTA GCTATAACGAATAAAATTATGTTTTCTTGTTTAGAAGAGAGTATGAATCG CACTGAAATCCAAATTGGAGGATGTCTTTCTGAACATTGCCAgcaattca atttttgatgGCACATTTAGCTGCTTTTGATCAAAAACGGTTACTAAACT GGTAATGGAATACCTGTGTATGAGATTTTTTATAAACTTGTAAATTTGTC AATAGAAAATGCAACATACATGATAACTTATTTTTGTCGTTTGAAACTtg tattaatttatttttttaatgaattttagtGTCTGATAAACTTACGTTGA GTGGTGTATATATTTTGCCCCACCGAAAGAAACTGTTAAAAATGtgttta atttgatttttttcgtatttttcaGCCTTTCCAACATCTTCACTTTTTCC CTCCCcctccccgcgaaaatttcttctccagCTCCATTCCGcccattcgt tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtgtTAATAG AGACTTCACACTACATGGTACCTACTTTCCATCTTACCGTcttaaaaaaa gccaaaattctGCCACCGAAAATGTCTTTGAAATTCACGAGTTTTGTAGA AAATTCcggaaattttgtcaaattccgAAAACCGATCAATTTTtagctaa attccgttttttcgaacaaaaaataccaaattttccgtctccggCAATGG ACCTAAATACCGAATTCCGTCCATTTTTTCGTCGAATTCTGAAATTCGGG ACGAAAAAAGGATCGATTTCGTTCCTCCGTCAACCATAtgaaccccctcc cccccccccccccaaaaaaccccctccccccggccCCATTCATTCAATAG AATAAATCAGtgattcgaatctttttaaaaacaaaacattcgaatgttcg aataattcgaatcttttttcgAACagcaatcaaaacaataaaattcatGA AGAAAAGTATTCCTCATATTTCTCATTCAACAGCTGGCTGTTCAGGGTTT TCTAATATTGATTCCACTTTTCATTACAAACAGAGAATAAAGAATGGAAG TTGTTGGCAAAGTTATTCAAGGAAGTGTCGAAAAATTACGAAAGATTTCT TATGCATGGGTTCAtggcaaagaaaaagaaacaatcCATGATGTCATCTC AGACGATAGTTTCTTACGAGATATCGTTTTTTCCATAAATCATTTGGATA AATATACGGTGTTGACGTTGGAGGAGAAGATAGAGCATATACAACGCCTT GGGATTGTCTCGTGGACTGGTGATTCCAAAGCTAATGCCAAAGCTGCTAG TCAAATCGATCGTTTGATCAAAATGTTCGATGATGAATCTGAATCGATTG AAATTCGTATCGAAGTCATCAAAACTCTCTCTTTAATCTNAGTGAATCGA TTGAAATTCGTATCGAGGTCATCAAAACTCTCTCTTTAATCTGCTCTTCT AGCAAAGCTAGTCAGGATAAATTGAGAAATGACGGGTTCCTGAGCTATAT GATTGAAATCTTAAGATTAACGGACCCAAGACTAATTGATTTGCAAAAAT GGATCGTTCACGCTTTGGGTTCGATTTTGTGTGACAATACAGAGAATCAA AGATATGTTTTATCCTTCCATCATTTGAAAGACACATTATCTAGATTTCA GACTGAGAGCTGGTTCTGCTGGAGAAGAAACGAAGCAACATTTCTTGCAA CTGTACTTTTGTTTGGGAAGTGAATAAAAACTACGTTAGGCTtttatcac tttcgttttcattcaATTGTATTTTTCCGAGAATTTTAGTAAAAGTGACG TCactattattttgattattgCGTACACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009353TCONS_00009353Clytia hemisphaericatranscript
TCONS_00009354TCONS_00009354Clytia hemisphaericatranscript
TCONS_00009355TCONS_00009355Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:181081..192759 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC646730PREDICTED: uncharacterized protein LOC646730 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.1 18.91 27.43 27.12 50.16 40.68 24.6 23.74 27.29 21.52 18.53 21.93 4.66 4.72 4.76 5.98 8.36 8.68 4.01 4.81 7 6.58 19.9 17.06 35.69 27.42 6.41 5.06 10.53 11.51