XLOC_005245 (gene) - C. hemisphaerica

Overview
NameXLOC_005245
Unique NameXLOC_005245
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:429090..433134+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005245 ID=XLOC_005245|Name=XLOC_005245|organism=Clytia hemisphaerica|type=gene|length=4045bp|location=Sequence derived from alignment at sc0000093:429090..433134+ (Clytia hemisphaerica)
TGCATTAATTAGCCAAATTCATTAGACAAAATGGTAATTTATTACTGGGA
TTGGTCaatcaacaaaaacagaaaaattgtttcaaaaaatttctctcttt
gGTGGCTGTTTGCTTTATATGGAGAATTGTTTTGAATACTTATATGTGGT
TGTAATGTTGCAATAAAGTCATGTTTTGACTGACGTTAAGAAGAATTGAA
AGTGTAGTGGtaagattttttgatttgttgaGATTTATAATATCGTAACT
GAgagacaatttattttattttttttttcaaaaaaaagtggaTTCTCCAA
ATTCAACCTATGGGTTTTAGGTTTTGTATTGCAGTTAAGTCTTCAaaact
cgaacttctataacttgtcgaatgtctccttaacttggTTTTCCTCGTCC
CGTTCCGTGATGCGTGCTCGAGTTTTTGAGACTCTGCTGTACTGTAATAT
TACCGCTTTTGTTGACCAtcttttttaagcattttaaagctctCCTTCTT
ACCTTTTTCCCATAGTTAAAAGCTCAAGAAAACTTTACGAGAATGGGTGA
AACAAGCCGCCCTTTTATCAAAACGCCCATTGGCGTCACAATGTTGATTA
ATATTGTAAGTATACACATTTGTTTGTATTGAGCAAAGATCGTTGTTAAA
ATTTGTATAATGTCCTTAGCCAATGGTTCTCTGAAATCACGATTTCACGA
TTTAATGAACCCTTCTAGGGAGTTCTActatttcgaaatttttgaatttt
tcttttgtcgAAATTATGCGAATAAAGTGACCCTAGATGAGACTAGAATC
ACATGCTGCTTTTCCAGGCTAACTTCGTAATATACAGTTTacattctcta
attcgacgttctgcTATTCGATACggtccattattcgataatagcgagtt
tatgtatttgcacttttgaggatgttaaagtgactgaagcgatttagaaa
aATACCCGCAAAATCGaagacggtaaaagtgctgatttaccgttgtcctc
agctggtcaggatctagtcaaattagaaccttaccgtctccgtcacagaa
aacacgtatacataaactcggttaTATTGAAAGTGAACATCAaaaagaaa
ctctcatataaatGACGCTTAGAATCTAATTTCCTTTTAAGATCAAGTTA
GAGTGCGTCAACTGTATTCATATATGTTTCTATTTATATTGATTTCTTAT
TCCAGGTTTTCCTTTTCATCACATGGTGTTTAATCATTAGTTGGAGGTAT
GGGGACGAGTTGCGTGAAAAATTAGCTGAAGAAATTGAGTGGAAAGTcaa
cttctttttcatttcgattttCATGGTTTGGATATTGATGTGTGTACTAT
TTGCAACCTTCAGCCTTGGTAAATGCATGAACCAAAGATGTTTTACAATG
GTGAGTTTACCTGAGCATCTGGTAATGACTCTTGGTTCTTGTCTCGGTCT
GCGTTTACACGTTTTTAAgcattgggctattccaaaagATTTGTaacccc
tatgttgaggagatcttttttttaaaggtgacccccctggatttttttcc
caatttttcaggAACCCTGCTAGACTTTTTTCTCCCTTttctttggacca
ccctggattttcgacctcgttaaactgaccaccctggattttatcattca
aaaaaacTAGACCAccttggattttttattttccagaccaccctggacat
tacacctcctcaacatagttATGTGATGATGAAATTTAAGAATCTGGTAT
TATTTCTTAATTCATCGATTTCTTTATTGCAATTCCACTTTATAGATGGT
GGTTCTTGGAGGATTGCTTGGAGCATTGGTCATTGTTGCAAGTGGATTCA
TTGCTTTGGAAGCTAAAAGACATAAATGTACTTTATGGAATTGTCGGATG
GTGGATGCGACAGCTGTAAGTTGTccttcgtttaaaaaatttgaaacgta
GAACCTTTGTTAGCCAGGGTCGTGCATTTGCACATTTGTAGTAAGAGAAA
GTTATAAATCTTGGACTTTTAAACGGTCGGTCCATGACCGGTCTGCTCAG
CTTATTTTGAACTGGATGGATTATGGAAGGAGGGAGGTTTTGAACCGGTA
ACCGCCGTTCTAGGATTGTGATGCTGACTTTTTTCTAACAcctaattttg
ttttttattttgataccgtgagatcgggtaacttgcatcagtggaggcta
acatgcacagccctcaaatgaatgaccaatcaaaggagcaaaatttcaaa
acaaatgaactacgcagctccgctcgcagctctactctaccatttttgtt
ttgatttaactttgtattttaaggaccagccaggtcattcatttgagggc
tatgcatgttagcctccactgatgttACCCAACTTCACGATAGTTCATTA
ATAAGAAATGTTTTCCCACCTTTTAGGCATTTGGTTTCCTTTGTACTATT
GGTTTGGTTGTCCAAGCATTCATGTAtttcttttttcacatttataAACA
TCGAAGTTGAATATCATTTCTTTCTCCGACGAATCACTTACTCCAGTGTG
TTATATATGAAGCTTTCTAGAGATTTTCGAAACGATAGGATTAAAGTAAT
GGGATTTTGATAACTTTGGTTTTGGTAATGGATTCATAATAACAACAAAG
GATTACACCTATTACAATATCGGAGAAGCTCTAGAGAAAGAGACTTTGAA
TATAAAGTTATGGAACAATGGACTCTTctagaaaatatttgaatattgGG
AGcaggaggatataacattttttgaattttacacGCCGAagattgtgact
tttgacccaaCGGGCAGTATAATTCTCagccccctggacaagcatcaatt
gacccccggacattcaaaatcacccaTAATCAGAGCAGATTTTTCTCCTA
GACAAGgcaaatttagatttttcactaccccccccccagactatatatcc
tccacccccatgtacgaacatttccTGGAAGTGCTTCTTAAGGTAAGTCA
GATCATCAATTGTAATATTTATGTACAATGACTTTGGTTTTCTAAGATGA
AAACCTAATAATGTTTTCCACTATAAGTATAAAaactaaatattttcaat
tttattataAATACCTAAATATTCTAACGTCACGTCCAAACAAAGATGTA
TGTTTTTTCACCAGGTACGTTCGGGCCATAGCCCTATACAACCTATCAAC
CTTTAGGGCCGGTctctggggggggggcatttgCCCACCTGCaccctgcc
accacgccacttTACAAGACCCCTTAAAAGAAAATCGCGTCGTTAAGGGT
TTATGGATGCATTTAATTATATAGTTGTGCAGTTTCTTTACTTTACGGTT
GACAACATTTCTAACACCACCATGTCCATATTAGCAAGTGTATGTATTGG
AGGAGATCGAGGGAAACGGTAAGTGAAGTTAACataaaacaaagtcgata
gttgaagTACGGCtcatatcgcctttgctcacctaaccAGACgtagtctt
tttttttttacctttgtCCAGCTATTTTGGGAACATGCCAACTATgccat
accttatcggggaaaataccttatcggggaaaactttgtcggggaaaagt
gacgaaattttggacaagtgacgaatattttccccaaCGATAATTTCCCC
Cgcccttaatgcgtttaccaactaccagcaagtaacgaatttttcccgac
gaaaattttccccgacgaagttttccccgataaggtataccgtctccttc
gatacatctcgaatacataaactagCTATAACGGGTGCGAGATGGATGTT
ATGAACGATAAATGGACGTTGTATTGCTGTTTTGGTACCAGCTATGGAAA
CATCAATACTTTTTTGCTTTGGGGTTTGGAGATTTCTTCAGCTTCAAATC
CCTCTTCCTTTAGTCATTTTGCTATATGGAGCGCTTTCTTTACAACAGCG
ATTTTTCTTTAGTACTCTTAAGTGAAGATACGCCTGAACTGCAAGTGATA
GACCACCAATTATACCAAGACTTGcctgaaatagaaaaatatatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009363TCONS_00009363Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009363-proteinTCONS_00009363-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:429090..433134 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46	0.32	0.29	0.17	1.13	0.93	9.37	9.06	10.66	8.05	6.16	9.85	6	4.77	7.41	4.89	1.39	2.15	0.04	0.07	0.08	0	0.3	0.14	0.37	0.3	0	0.09	0.11	0