XLOC_005296 (gene) - C. hemisphaerica

Overview
NameXLOC_005296
Unique NameXLOC_005296
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000095:112563..119729+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005296 ID=XLOC_005296|Name=XLOC_005296|organism=Clytia hemisphaerica|type=gene|length=7167bp|location=Sequence derived from alignment at sc0000095:112563..119729+ (Clytia hemisphaerica)
TTTTTGATTAGGTGTTTATCTATGCTCAGTCGAGGGAAGGAAACGCAAGG TCGAACGGATTATTTTGTTTTCCAGTCTTTGAGTTTGTTTTATTTAAGGA GAATAAAACCATTTCTGCAATCATTTTCTATCTTTACTCGAGATTAAAGA TACACAGCCGAGGTAGGTCAATGGAAGTAAGTAAGTCTTGAAAATATCTT TACAACTATGTAATAAAGTGCATTGGTATGAATTTAATTTGACAGAtggt caaaaaagttttatacaTGGAATTGAATTTAATAGCAAGTAGCACCGGGA TTTTTCTTTCCATTTCTTAGTGAGTTTTACTTTGATgaattctgaaaaat agaagccttttaGATGTTCTGACGTAAATTCACGCAAAGTGGAATGGGCG TTACTGCGTAGAAAAAAAGCCGTGACTTCTAGTATAATAATTTCGTTGGa aggcttgaaaatgaaatttggcaGGAATGCAGGTTCTTAGTATGTTCGTT TATTTCTTTATAGAAATGCTGACAAATTTTTACAGATCCGTCTCTTTCCA CAAAGATTTCTACCAAAATATTCTGTCCAGGAAATATCCAGTCGGAAAGA TGTCCGTTAGTATAAAATCTGTTTGGGAAACATTCGTTAGGAAAAGTTTC CGGGtataatttgagaaaaattcgtAAAAGGTAATACTCTTCGGTaaaag tcccggggggggggttNTTTTTTGGTCAAATATTGCCATTAAATAAGCAA ATATCTGTAAGGAAAGTGTACGAAATAATTTAGATTTTGTGGTAATTCAT TTATGACGGTTGgcggaaatttttcaattttggttagAAANTATAAAATC TGTTTGGGAAACATTCGTTAGGAAAAGTTTCCGGGtataatttgagaaaa attcgtAAAAGGTAATACTCTTCGGTaaaagtcccggggggggggttagt TAGgaaaaattgggtacggggacgtgcggCTCGTCAGAGTCTtcttttag gctctgaagatatctgacagggtccaaaatttactgattttcAAGCCCAT CCCgcataaaatgattttgaagttTCGCTTAGGCTCATCAACAAAATATG TTGGAAAAAAACTCTCAAGCCCCCTACTAATCtgaatatttcttttaaaa actttcctGTCTATTCTGGTCTTGACAGTTTGAACACTTATAACCAGGAT ATTGTTCCAGCAAATGATGATTGGTTTATTTTATAAACAAACGCAGGCGT TCagctttattttcctttttaaaagaGAAGTTAAGGTTACAAGGTCGTTG ATcacttaactttttttggtgtcGCCGGAGAATTCACACGGCtcgatttg aaaaaattcaactttgtgtGCAGAGCCTCTCTTCTATTATTCTTTCTGAA GAAGCCAATCAGCGAGAAGTTAAACATACTGGCTGTGTCTTTGTTTTCAT tatgtttgttttgaattttttacgcgcaacctttttcttattttcaatgG AAGAATAACAGCGCTCAGCGACCAAATCGCTCGAGCCATGTACGTTGTTG GGCGACCAAATAAGCTAAGTGGACAACGACCTTAAATATAGAGATAAAAA TTGAGATATAAATGAGATTGTCAAATGGTTCGGTTAAGAGAGCCCATGCa atgattttgttgaaaataaaataaaacttgttGTCTTTCCTTATTACTTA GATTggctaaaatagattttttcggAGGTAAATTAATTTGACGGATATGg gtggaaaaaattaaattcggTTGAAGTTTTAATGGGTGGATAAAGTATTT TTGGTCAAATATTGCCATTAAATAAGCAAAATATCTGTAAGGAAAGTGTA CGAAATAATTTAGATTTTGTGGTAATTCATTTATGACGGTTGgcggaaat ttttcaattttggttagAAAGTGTTAGAACAAATCTGCAAATTTATTCTA TCGAAAGTGTGCGCGTGTTTACATTTGCCGTaatttggaatttgatcata aGAGACTcaattttaatagcttttccattgtatttttcGCTAAATAACTT TTAAAGGAATTATCTTTTTAGTGTGATTACGCAAAACGTGATTCCCTCAT GTTCAAAACCTTAAATCTCAAATAAAAGGAATACTACAAGCAATTACTAA TGACAAGCATGTGTAAACGCGTCCATTGTTTATCATAAGTGTAACAGTTT AGTATATTGCCTAGAGGGCCCTAGAGAGTACTAAAAGATTATCTAGTTCT GTATAAAAAGTAGTGTCGGATTTACGATAGataaaaacttgtaaaaagCA GGTGAGATGTCAAAATGTTGATTAAAAACTTCTTCGTTTGTGTACAATGA AATGTTATAACTGTCATTTTTGTTTAACTATCAAGAAACAAGAGGCATCT CCTTTGTTTCTTGGGACTACAAAGAATCGAAATACAGAAAAATTCGGCTT ATCTTGCATGCAGCTGTCAGATTTGCGATTTAACTTGGATCTACTATAAA ATGATATGACTATATCATCCATGtcagtgatacaggggtgtaccCGTTTT CGAGAAtttgatcttaattttttttctaggtcTTCTAGATAAAAAACATA ACCAACATGGCAGATATTCCCGATGCAAAAGAACAATATATGAGACTCAA CAATGAAATCAAACCGAGAtttgagaaattgaaaaatatagatCTATTCG TCATCGATAACTCTATCCGTGAGTCCACTGTGGGTGCTCTTCGTGGACAC ACACTGGAAAATAAATACAGCATTTTGAATGAGGTGAGGGAAACTTCAGT AAGAGTTGAATAAAAGTCGTCGAAAAGCAAGAGTTTTCAGAATCATTGTG GTCCATTTTTTGGGCTTGttttataatttctatcaaaaatATCGGAAAGA AAAGCGTGCCTGGTCTATATTTTTTGTGACTAAGTGTGTGTGGTTACCGT TTACTTTGATCATCCGCTTATGATGCTATTGAATTGTATGTAAATAAACT TTTTAGATTTCCTAAAAGCCTCAAGAACTATATAAATTTGATCAAAACct attttctttcctttcaatcATCCATTCGGATTAAAGCTATTTAAGAAACA AATTTGAATCTATATATTTTATACTACAGACAAAGGAGCTTGGTTTCCAG CATAACATCGTTGGAGCATTTTCACACTTGCGTAGAGTCGACGATGAATT TATCACGCATCTCATCAAGAGTGGGGAAGATATGACCAACAAGTATGCCT TCTCCGAATTTTATGACAGTTGTGACAAGAAAACACATTTACCTGTTCCC GGTATCCCGATCGGATTACAAAAATGTAAAGAGCTTGGTGTCCCCAATGT GATTATGGAGGTTGACTTGGCAAATCTAGCACCTGAAAGTCAATTCACCC ATGAGAAGAGATGCCAACTCTTCCTAGAAAGATTCCAATGGATTCGTGAG AATCTAAAGTCCCCAGGTAGGATTTTAATCAATTTACGTGATCTCCCAGC TGCCATCATTAATCCAAAACTCCTTGATCTAGTCTTGGAGACAGTTGATT TCCTATCTCGACATCGTCCTCAAATATTTGCTATCCTTACTGAGGAACCG ACTGGTCAATACTTTCCTGAACAACTACGAAACATGACCAAGACAGTCAC CGATCTGATGAAAGGAAATGGATACACCGGTCATTTCTTGGTCCACATTC ATCAGCAATGGGGTCTACACAATGCTGGTAACTTAGAATGTCTTGCAAAT GGTGCTACAGGGATTTGGTGCTCTGTATCCGAGGAAGGAGCCGCTCTTGG ACATGCTTCGTCAGCATTAACAATTATGAATCTCATTCGACTTGGAAACA CCAAAGTTCAAGAGCGTTATAACTGCAAATATATAAGAAAAGCTGCTCAG AATATCACCCAGGTATTTATAAAATCTTCCTTTTGACATCCCTGTATGAA TACTTTTTTGTCAGAATTTTCTCTCATTGTTAAAACAATTACATGGTAAT TATAACTGAACGAAAAGTACTTCGGGTATTAGAAACGATTCACTTATTTT CATAAGCCAAAGCCATTTACTTCTCAAACGATGGGAAAAAATTGTCAACA ACAGAGGCAAACAGCCATTCTATTTCCGattttaaaacttcaaattcaat cttttcaaGAAGACATATAGTACAGTCACTGACAATGAGAATCACCCCTC TTTTTTCAGGTTGTATCGGGCAAACCCGCCCATCCAAAAACACCAGTTTA TGGTGCTAGAGCTGTTGATCAAGTCTTTGGTCTCAGTGGAATGGGCGGTA ATGTGGGCGGATTTGGTAATATGGACCTTGCCGAGTTTTTCGATATCACC AAAACAATGCGAATTACCACACTTGCATCAAATGATATGATTGTTACCAG GTTTGTAATCATTCTTTTCACTTTGTTAAAAGTCTCTCGCAAATGACTCT AAAGATGATGAGcaaaatcatattttttaataattcttTTGTACATTTTC GTTTTCAAACCACCCACcctaaaaaatgcaaaaatttaaaGTTGAATTAA ACGAAAACGATTGATACCATCGGACAGAGGCATGAATATCTGGGCAAGAG AAGTACTATTATAAGGTTTGCCCCCCATCAGTATGTACAACTATGTTTGA AAAGTATATACTGAGGTATTCTCAAAACCAGCTTTTACTACCACGACCAT ACTTAGAGTTTCAGATGCCGGAGAAAATATAATCATTGTAAATattattc tttcattttacaCAATAGATTGACCCGTTTGTTTGGCGAGGATCCTAATT TCACTGAAGCAAGAGCGGAGCTGATGAAACAGCAAATGTTGGATGATTAC AAGAACAACAAGAAAGAGGAATACCACAGTCCTATTGGATTAATCACATT GTTTGATAAAGCTGGAGGTAAAAAGACTCCAGCAATGTTGAAAGCACTTC AAgaggtttgtttatttttactaTTCGTCAATTCTTTACACACTTTATAG AATTGACTTCGttttaatacacccctgtgtcacaagaCTCGAGACTGGGA CTCCAGCCGCACTGGAAAaaagactttgatttcatccccattcgaaattc aatgtttataaATTGTACTCtgaaaccatccccactggatttttaacctt ggaacaatagaatattATCCCCACTAGGGGTGTATTAATTGAGTCATTGA GGCACGACAtaaaaaacttttcataaattacatcacgTGCAatgcttacc tcgttttcaaaatgttaCTATGGNCATTCTTTTCACTTTGTTAAAAGTCT CTCGCAAATGACTCTAAAGATGATGAGcaaaatcatattttttaataatt cttTTGTACATTTTCGTTTTCAAACCACCCACcctaaaaaatgcaaaaat ttaaaGTTGAATTAAACGAAAACGATTGATACCATCGGACAGAGGCATGA ATATCTGGGCAAGAGAAGTACTATTATAAGGTTTGCCCCCCATCAGTATG TACAACTATGTTTGAAAAGTATATACTGAGGTATTCTCAAAACCAGCTTT TACTACCACGACCATACTTAGAGTTTCAGATGCCGGAGAAAATATAATCA TTGTAAATattattctttcattttacaCAATAGATTGACCCGTTTGTTTG GCGAGGATCCTAATTTCACTGAAGCAAGAGCGGAGCTGATGAAACAGCAA ATGTTGGATGATTACAAGAACAACAAGAAAGAGGAATACCACAGTCCTAT TGGATTAATCACATTGTTTGATAAAGCTGGAGGTAAAAAGACTCCAGCAA TGTTGAAAGCACTTCAAgaggtttgtttatttttactaTTCGTCAATTCT TTACACACTTTATAGAATTGACTTCGttttaatacacccctgtgtcacaa gaCTCGAGACTGGGACTCCAGCCGCACTGGAAAaaagactttgatttcat ccccattcgaaattcaatgtttataaATTGTACTCtgaaaccatccccac tggatttttaaccttggaacaatagaatattATCCCCACTAGGGGTGTAT TAATTGAGTCATTGAGGCACGACAtaaaaaacttttcataaattacatca cgTGCAatgcttacctcgttttcaaaatgttaCTATGGTAATTGTTTCTC AGATGAGTCCGAAGAAGTTTATTTAATATACAAAAATAACACCTTAACTC TCGAAAGttttaatcaccttggtaatggtgACAAATAAAGGTAGTCGTTG AACTCAAaatgatttatgaaaaggcctattctttaaagggacataaaagt actttcgaaatttgtaaacaaaccgtatgcaacAACAACCATATATGACA AGACAAAACACGTCGTCGTTGTAACATAATCAGACACCAAGTGCAATTCC tactaaaaaatctttttaatttctAGTATGAAGTCCAATCGTTGCATATC CAAGAGCTGATCGAAGAGATTCACGACCTTTGGAAGTTGTGGGATTCTTC AGACGGCAATTTAGATGGAAACATCACATTCGATAATTTCTATAACGCCT TCATGAACGAATACTTCGGTTGTTACAGATGTACGCAAACTCAACAAGCA CTTCAAGCTATTAATGTTGTTGATGATGATGTCATCTCTTGGGATGAGTT TTCCATCTTTTTGAAATGGGCTGGTAAAGAATATCCGCAAGTTGAAGACG CAGAAGCTTTACTGGAGAAAGCTTTCTTGGAAGGTATTGTACCAGCAATG CAAGATGAAGTTATCAAGAGTGCCAAATCTGGCAAAAGTCTTTTCCACGA TCCACATAATTTCTAAATGAATTACTGTAATGGAATTTGATGCATAGACT CTTAgaattaaattattttgttcTAACAATTATTATTTATTTCGAATTGT ATTAAAGTCACACGTCACAAGAAGATGAAATTCACCTATAAATCTTGCCA CCAAAAGGATTTCAGGTTGGAGTTGAcgaaattatattttattaggaAAC TCGACTCCATTTCTCTTTCATCCAGGTTGATAGATGTATTGACGCACTTA AGGTTTATTATGCCCCTGATACACatcttatttataaaaaatccGTACAT ATAATTTATATTTAACATTTGTATTTTCTCAAATGCTGAATATAAACATC CTTAAAAACGAAAAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009443TCONS_00009443Clytia hemisphaericatranscript
TCONS_00009444TCONS_00009444Clytia hemisphaericatranscript
TCONS_00009445TCONS_00009445Clytia hemisphaericatranscript
TCONS_00009446TCONS_00009446Clytia hemisphaericatranscript
TCONS_00009447TCONS_00009447Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009445-proteinTCONS_00009445-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:112563..119729 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2216.39 2133.55 1613.11 1308.78 10.61 8.66 10.16 11.43 15.69 13.81 8.77 9.19 42.49 31.83 15.66 29.04 0.22 0.5 158.59 209.17 3.45 1.36 854.98 729.73 0.79 1.77 57.17 65.81 424.73 453.47