XLOC_005305 (gene) - C. hemisphaerica

Overview
NameXLOC_005305
Unique NameXLOC_005305
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000095:550139..553583+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005305 ID=XLOC_005305|Name=XLOC_005305|organism=Clytia hemisphaerica|type=gene|length=3445bp|location=Sequence derived from alignment at sc0000095:550139..553583+ (Clytia hemisphaerica)
AATGTATAATTTGTGAGAAAACATGATTTTTACAGACAGAAAAAATTTAG
TCGTAGAGATTTTGCTATAAAATATTGATATGTGAGATTTCTGAATGTTA
AGAATTTTGTGCTAATGACGTcaatgataaaataaaaactcaaAAGAATA
TAATTCAATCTCTCAATTGGTGACTTTTCGCTTTCTGTTTTTATTTAGAT
AAGCTAATAGcttttaagccttaaaaatgaagAGAATTTGCTGACAGGAG
CTGTttctattgatttgatttttatatatTGACAAAATATTGAATAAAGT
GGCGTAATGCTGAACTAGAGTTGCAGAATGCATATAAAGCAGACGAAATT
CAGGAGCTGACAAACCAACCGAAGCTCATCAAAAGAAATCATTAGCAGCA
AACTGAGAAACgagataattatttttctaaccATCAAAGAATTATTTGGG
TAAGTACATTATTATTCTGTTAATGAGGAAACCTAATGGACTCCTTTGCA
GAACTAGAAAATTTACAGGGTGAGTTTGTTTTGTCAGCCTAATGATGAAT
AATAcgcccccttctcatagacccactggaaaaattgcccaaaatatcgt
ccccggtggaaaattatcctccaagttttgtccccactgaaaataatcaa
ataaactaaccctcattgcaaaatattgtgctatttttcccatccccact
aaattttctgacttaaaaacaaaagaattgaaatccccagccataaaaaa
tatcaatccccatcgagtttcagttcgttatttttaccccaacTGGTTGG
CTGAAAAATCCTAACGAGTCTGTGAGAAGCGGGTGTAATAAAATGCGCTC
CTGCTATAAAGCAGATTTAGGTAGCCGAAAAAACTTGCAGTATCTACAAA
CCTTTCGTTTCAATTTAGTACGCCAGAATCCCAACACCTAAATTGAACAT
CCGTGTGTATGGTATGTTTATGTAAAATGTCATCTCAGCATCTCATCAAA
GCTTACAACTATAATTGACTAGAGCGATAAATGCAACAACACCCAATTAA
CTCTATACCCAGCTTTATTAAAACGATATGTGTCAATTCTTTATAAGCAA
TTTATTCTataagaaaaagattttggtaTTATCAAACTTAGGTTTAGTAA
AGCCCCTATGtacttactttttaaaagaagtaaatcatttttctaaaaaa
atgatgcaaaatttaagaattttctAATAACCAAAAGAGCTCTTTGATTT
TTAGCCCCCTGCTgcatatttcaatttattaattagtttcaattaatttt
ttctctcatttAAGACACCTGCTGGTCAAATACTACAACAACAAAATGAT
CGAGAAAAACGAGGAAAAAGATCGAAAGATTATCGATAAAACATTCTCGC
ATCTAATCGATGAAGAGGGGAATAATCACAAAACTTCTCGTGTCATGAAA
CTAGCTATCCCTGGGCTGGACACAGTTAAAGAAATCACTAACATTTTATC
CAAAGAAGAATGCCAAGCTGTTATTGAGGGTACTTCAACATGTAAAGAGG
GTTTTAGCCGACCGTCAGCCTTTTCACCAAAAGATCGCGATTGTCATCGA
ATTCATACAGTTGATAAGACGATGAGTGAAATCATGATGCCCCGATTACG
ACCCTATCTTCCCGAGATCGTTAAAATCGACGGAGTCCGATGGCAATTAA
GCCGTTTCACACACCATTGGAGGTACGTTCGTTATTATCCCGGTGGGCAC
TTCAGTCCACATTACGACGGTGTCAAAATGAGCTCGGAGCCAGTACCCTG
TTTATCAGTCTTCACGTTACAAATCTACCTGAACGGTATTGAAGATTTCA
CAGGAGGTGCAACACGCTTTTATCCTGACTTTGAGCCAGATAGAAAACCT
TCTCAAGAAATCCCATATGGTCACGTGAGCAAGCTGTTTGATGATAAACT
TTCTATGATCTCATTTGATAAGGAAAAGTGTAGAAGACATGATGTCTTAC
CTGAAGAAGGTAAAGCACTTTTGTTCAATCACGCATTGAATACGTTACAT
GATGGTGGCCCTGTTCTTACGGGAACAAAATATATCATGCGAGGAGATAT
CTTGTATACAGCTTTACCTGAGGATATACACCTGCTCCCAACCATCACAT
CAAGCGTTAAAGATTCTGAATTGAGCAGTCGTCATTGGTGTCCGTTTGCT
GCAGCTAAACATGGAACGCGAAATCATATTGGTGAAGTGTGGTATTGCGT
GTGTGCGGAAGATCAGCATGGCGCAGATGTAGAGAAAAAGGAACGATGTT
GGACTGAAGGTTTTGGTGAAGAAACGAAACATGAGAAACCAAGAAGAGCT
GTTCAAGAAAATGTCAAGCAGCCAAAGGCTTTGGTGTTGATCAGTGGTAA
ACGAGCGTCTGGCAAAGATTATATTGCCAACAAGATCAATGTTGCATTAC
AACAAGCTAATCTCAATGTTCATAGAGCAGCTCTGGGAAACATTAACAAA
GAGCTGTATGCTGAGTCTGTTGGTATCGATGTTAATCGATTGTTGACTGA
TAGAGCGTTCAAGGAACGCCATCGGATAGCTATGATTCAGCATCACGCTA
ACAAGAATGAGGAGGACCCAGAGTGGTGCGTCAAAGAGGTTATGTCTAAA
GCAGAAACCTCAGATATCCTATTGCTAAGCGATCTAAGAACTTTAGAAAA
CTTAGCCTGGTTTCAAAAACAAGGAATTCCAACAGCGCTTATAAGGATTA
ATGCGAGTGATGAGGCTAGACGAAAACGCGGTTGGGAGGCTTGTGATGTT
AAAGATAATTTGAAGACAGAGGTGGATCTAGATGAGTTCACAGGTTGGAC
TGCTTTTTGGGATAACAGTGATGGTACGGATGCTGGTCATCAAGTCTTGA
ACGAATGGATTGAGCATACAGTTGTACCACGGGTCCTTAGtgctacagtt
gactctctctaattcgatccttAAGGGACCAgggattttcttcgaattag
agaattgtTCGAATCACAGAGAGTATTCTATACTACTTTAAAGAGGGGGC
AATAttatagttcgaattacaggaaGATTCaaatagtagaggttcgaatt
agagagttgGCTGTATATGAAAACTATTTGATGATGTGGAGCATTGTAAA
GTGAAGAAAAGCTTAATGATTGGTTAATAAAATACTGTTCTATTGGTAAC
GAAAAACTGGGAATGAAATTATTGAAACAAagaatttctctaaaattttg
taattatcttttaacattgttttgtatttttgatattttacagtACTATG
GTttttaatgataaaattttagcgCACACTATATTTTAGTTAAGTACACA
CATTATTACTAGTGATTATATCAACCGCATTATTTAAAGACACCGATCAC
TGTAAGAgtaaatgggccattccattttatatccattcaagGGGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009495TCONS_00009495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009495-proteinTCONS_00009495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:550139..553583 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36	0.29	0.25	0.18	1.41	0.61	0.85	1.69	2.46	7.48	6.28	3.17	34.3	19.78	2.93	6.02	9.84	21.78	42.55	46.14	20.01	21.15	6.18	5.69	14.06	18.71	12.56	17.56	28.67	9.9