XLOC_005485 (gene) - C. hemisphaerica

Overview
NameXLOC_005485
Unique NameXLOC_005485
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:176909..182329+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005485 ID=XLOC_005485|Name=XLOC_005485|organism=Clytia hemisphaerica|type=gene|length=5421bp|location=Sequence derived from alignment at sc0000099:176909..182329+ (Clytia hemisphaerica)
TACAACTCACCTAGAAGAGAACAAAACAGTGGGTCGGAATAACAATTAGG AAATATGACAATACGTTACGTTGAGGTAAGAAGCGATCATTGGTCTGATG CTCCTTCTGCTATCATTGATAAACTCAAAAATCTTGGTGTGAAGAAGGGT CAGATAGTATGGATTGATGCCCATTGCGCACATATTCATGATCAAGCAAT TATTAGTGCATACTGGGATGACCACATTGCAAGCGAAGATCCACTTGACA TTCGCTTTtatttgcaaaattatgacGAAAGTTGGGCAAGCGAGTACGAA AATGCTGTGGATTTTGCCTCGAAGATACAACCACAAAACCTTATTTCGAT TACTGGTAGTGgcaatataaaaaataaaagcgTCTGCATTGTCTTTTATT ACGACGGTCCTGAGGCGAACCCACGACAAAATATCAGATGGAAAGAATCT AGGTCAAGTAATTGGTCGAGTGTCGCAAATGACATCATTAAAGAATTGAA GAATGCTGGTGCGAAACAAGGCCAAATAATTGGAATTGACGCACATGCCA ACACCGATAAGGCCAATCCTACAATTCAAGTAGGTTTTTGGAATGCTTCC CTTCCTGGTAATGGTGATTTGAATATAGAAtacaaaagtgagtcttttag ttttaaaattctttgtttttgtttcacaATTGCGATTAAAATTCTGCCCT TATTATCAGCTCTTATTAGCTGACAAAAAGAAACGAGGTGTACAGCTTAG CACACACAGAAAACATCTTGATATCACTTGCTTACTTCGTAGGAACTAAT TACCGAAAGGTATATGGCTGTCTATAAGAGTTATTGATCTGATTCTTATA AACTAGATGCTTATAAGAACAATTAACATGCTCATACTGTGTACTGTCCC TTGTTTACTTTGTAAGAGCTAATTAACGAAAGATATATGGTTGTTTATCA AGAAATATTGATGACATGAATAATCGTCTGCTCAGGCAAATTAAGGCACG TCCAAATTTTTCTTTTAATTTTTTATCACCGTTTCCACTTGTCATAGCAT ATCACTTCATACATCGAAAGAAGCCTATTGGAGTGTAGATCACTGGCCAT AATTAATTTTTCCCCCCAAAAAAAGATATCTTTTTTGGGTGAAAAAATTA ATAATGGCACACCAATTTTCACTTTACTGTATCCCTCTTTAAAGGAATTC TACCAGGTGACCCACGAAAAAATTCATTATACTAGCCATAACTTTCATTA AAGGTGCCACCGCAGCAAAGCGAACACACAGAGTTGAATTTgcgttcaaa aggaatgatcttagccctacagtaatttttgttaagagtgacctctcatc tgagacaaaattctttcaaatgctaacaaatctgtcaagggagtgattta cagtctacttagagtgacatccgtgccttgtcttacacgttttttataag aacaatttcataagaatacaaGGCTgcaatttggccaaaacctaagaaca aattaagaagaatctgaacctctgatttcagaaattactgagaaatacat gtttccattttaattaatattgacatttaaggctgaaaaagcAGCCCAGC Ctgaatcatatgacttactggtttttccaataaaaagcgtatatatctga agatactgctcttcacatgtgattttactaatgtacacgtttagtaacat aactgttcgaatactttgagtatagtaatatttttaccttatgaagagcg cttaataactacttgttgTATGGTATAAAAAGGAAAAGTACGACCCCTAG CATTAATACAGCGACGAGACCTAGAAATAATTCCATCGAAAGCGTCTCTG ATCATTTGCTGATCTAAGTTGTTACAAGCTCTGACGATTGCTGCTTTCAA CTGATTGATGGTTTGGGGTTGCTGATTGACAGGAACATTCCAAATGGTGT GTTTTAAATGGCCCCACAGAAAAAAAccgcttatttttttcttaatgaAA CTTTTAAGACAAAGAAATAGCAAATGATCAAAGGAAAGATGTTTGTTCTG ATTCAAATTTGATACTGTCTTTTATGAcgtttttcaactgttttttataa tgacttttgactttatacctccatatctcgataactacttttccaaaatt aaaaaatgacacatcaaaatttaagtttgcctttcctctttatcatgaaa aaagaattcagttaaaattcaattctttttcggacacagttaccctccaa actcttatactttttcTTGGGTCACCCGCCGGTACTGCACgcagaaaaaa tgaaataaaatgattgtaaagtttttaacaaTCAGTTACAGCTAGAGATG ACTCTTTGTTATCATAATGTGTAATCAATGAATCGTAAAAATATATTACA ATGATACATTATTAATGATATATTATTTATACATCACCCCCGGTTTCACg agaaaagtgaaaatttgagttttttccAATCTGGTCCATAAGAATGCTaa tatttcaaaacatatttatttttaaaaacgcaaaattatattttttttgg atttggcTAAGATTGGGCTTTTTCATGATATAAAATCTTTGTTCCTAAAC TACGTAGATAAAAAGTtaaacattttcatcttcatttttcaaccttttcc ttttcattttcgtgatatttttttaactctAAATGTTCCACTCGGCATta tctttcaaacaaaaaaataattactaaATTTCTTTCCGTGCCGCTTAAAA AGTTATATCAGACTTTAAGAATATACTGGGGGAATCCTCCTTTCTATCCC GGGAGGGGGTACTAGTGCAAAATGCGTTACAGGGATGCACCGCtggtaag ggtaccttttttcacctccaccagtcccacgtagggtcgcaaaaacacca aaatagaaaaatcagtccctcgtaggcaGTGCCGTAGACACAAATTATAT TTTAGGGGGGGCCCTATATGTTTAGTAtctaaggaggccccaccatcACG CCTATCATAGGCTATTTAGActattttatataggctatttagccgaaaat cgataaaaacctcgatttctgacgaaatataaatagtcgcgtcttctCTA AGGAATACATGGTTTCTCATTGTTAGAGAAATGttcatgacaaattttga ctCTGTGTTAATTTTGGTTTAGGAAAATATTCCACTTTGGTACTGCGCAT GCGTGCGCATGCGCAGGGTAAGAAAATCgggctttttgaaaaaaaaattt tttctaacAAACATGTGTTTTTGTACACGGCACTGTGTTTCATtctgttt ccaaaattgaatgttaaaaagattcttttggctttgggcaatgaaataat ggtgaaaaatagacgcgactatttatatttcgtcagaaatcgaggttttt atcgattttcggccaaatagcctatataaaatagtctaaatagcctatga tggGCTAATCAGCCtataggctaatcagcctatgataggctaatttgaag gtgttcttgactTATATATGTTTTGAATAGAAAGAAGCGATTGCTCTCTT TTTATGTCTTGattcattactttttttttgttcgtactcactttttcata cttttttttgttcgtactcactttaatcgtagaacttttagcgagactaa tgttagcgttttagcgagtttttcCTATTTTCGCTGAAacaaatctcgct aaaacaagCCGtaccgacagatcgctaaaatctATCCAcccgaaatttct ggttatattgtcttgtgatacatttttatcaatagttAGGGTTTCAGtac aaagaaatgctagaaaacaaattcagtcaataatgtaatacgagtattcg ctaaaataaatccaaaaaaaattaagattttcctgactcgctaatatacc ataaaattagtctcgctaaaatttctacgattaaagtagctGTTATCGCA CCTTTTATGacattaaaaaaatgttatttttgcgTTTACACTATGTGCTA AGAAAAAGGTTCATCATGTTTTATCATACGCACTATGTTTATCACTTTTT TATCGCATTTTTCGACAAGTGTGAACTACGCTACAGGTTCTACTTATCGA GCAATTCGGATTTATTGAACTTATAAGTGAAACATTCGATAAGTGGAACC ATTTTATCAATTTACCGAACAAAATATCGAACAAAACTTAGTGGGAcaaa attttagtcacctccaAAAAAATTGGTCACTTTTGCCCGACTAAGTTTTG TCCGATAAGGTATCAAGAGTAGACTGTATAGTCAAATGCCATACTCAAGA ACCTCACTAATTTTACAATTCGTCAATAAAAATTCCCATCATTCCAAGAT GCAAACCACTAGTGGGGGGATTAAGTGGAATTGTGTCACTGACCCCACCC TAGTTtaagttttcataatttttggtcGAGCTTTATTTACTAAGCATTTG GAAAGAGTAGCCTTGGAATTTCATCCTTTTGACACAGACTTTAGTCTTGT ATGCTTTACTgtttttatttctcattatatTTAGTGAGGAATGACAAAGA TAGCTATGATACGCACTACAAATGGGCATGTAACTTAATCGATTCCCAGA ACGGAAACCCGAATATATATTCAGTCACTACCAGTCAAAATGATCATAAT TCTGCAGCCACATTCGTCTATGGGGAACCAGACGAAATCTTGAGCATTGA TTATGATTTGGATAATGGAAAAATTACGGATAGTAAACCAGAAGTGCTTG AAACAATGGATAATAACAATGATTCACCCGCCGATCAAATCCTGACTTTT ACCTACAAAGAAACCACTGGCACAAGCACCGAAAACACATCAAGTTTCAG TAATGAAGTTGGAGCATCATTCAAAGTCGGCACGAAGTTCTCCACCGGGA TTCCATTTATTGCCGAGGGCCAAATATCAATGGAATTGACGGCGTTATAC AACCATACTTGGGGTAAAACAAAATCAATCTCAAATGATTTCAGTACAAG CTCTGCTGCCACAGCTTCTGTTAAAGCAAATCCATATACTAAAATCACAT GTGCCTTCAGTGTTCAAAAATCAGATATGGATGTCCCTTATACAATGACC ATGAAATCTGGGAAGAAATCCTCTGGAACGTGGAAGGGCGTGAACTGCTG GGATTTCAAGGCTACTTTTAAAGAGGAACCATTGGAAGAGACTTCTTGAA ATCTTGTAGAGATTTTTAAACTTCACATCGCATCAACCTCCCTATTATCA TGTTTTATCATATCATTTTGTTTTATCCATTTTCATACGTCATATTCACA CCATCTCACCAACCTTCATATATTACATTATGTTACGTTTCATGTTTATG TTACGTTAAGAACGCGTTACGTTACAAATACCTAAAGTATACGTCCACTC AAATGAACTTTATTGTTTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009802TCONS_00009802Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009802-proteinTCONS_00009802-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:176909..182329 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.15 0.06 0.1 0 0 0.03 0.03 0 1.02 1.43 0 0 0 0 0 0 0 0 0 0 0.64 0.93 0 0 0 0