XLOC_005508 (gene) - C. hemisphaerica

Overview
NameXLOC_005508
Unique NameXLOC_005508
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:345939..351496-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005508 ID=XLOC_005508|Name=XLOC_005508|organism=Clytia hemisphaerica|type=gene|length=5558bp|location=Sequence derived from alignment at sc0000099:345939..351496- (Clytia hemisphaerica)
GTAACGAGAAGACACCTAGATTACTATTATAGGACCATTCATTATCTGCC AAGGGAGTTGTAAAACTTTGGTCTAACAAAAAATCTTCTTATTCCTTTCA TTTCAGCATCTAAAATATTTGATAGGAATTATGGGGGTATTGGAAACCCT TTTATTGGTTTGTTTTGGCACCTACATTGTATATTCAGGTATTTATGATT CAACATCTCCCATGAATCTATCATGAATCTATCAACCCTTGACTACGTGG TCAGGAGGGGGATTGGTATTGCAGTGCCGTAGGAAGCATTTTCATATTTT GAAACTTTGAGCTCTAGATTGCTTGAAAATGCACTCAAAACAAAATATTT GACAATTATGACAAATTAAAAAAGAAAAACTTTGCATTTTGAAAAACTTT GCATTTTGAAAAACTTTGCATTTTGAAAAACTTTGCATTTTTGAAAAAAT TATTAGGGGGCATAGCTCCCTTGCCCCCCCCCCCCAGTTGCTACGGCACC GTATTGAATTTTCAAGGAAATGACGTCGAAATTCGTTGTCTTTGAGATAG TCAATGCAATGACGTCAAGCATTTTTACGGCATTCTTTCCTGGTAAATTC GAACCCAGTTTCTTCATACTTTAAAGGTTGATACCTTATCGGGGAAAACT TCGTCGTCGGGGAAAATTTTCGTCGGGGAAAAATTCGTCACTTGCTGGTA GTTGGTAAACGCATTAAGGCCGGGGAAAATTTTCGTCGGGGAAAATATTC GTCACTTGTCCAAAATTTCGTCCTTTTTCCCCGACGAAGTTTTCCCCGAT AAGGTAGGTGAATAATCCCTTAAAGGCTTCATTGCACATTTATTTAAGAC GTTAATTGGAGAAAAAAAAACCTTTGATAGAATTCGAACTAAATGGGGGT TTTGTGCTTGTTGAAAAGATACTAAGGAGTGGAATATTATAAACTAAAAG AAAATCGAAAAAAAGTTTGGAAAATGACGATGAGAAATATTACATCTATT CGCCATAGTTTTATTAAAAAATAAGTTTTGATTTTTTTAAAAAGAATAAG AGACTTTACTTTAAGATTGATTTTTTTAAATAATATACTAATATCGTTCT GAAACTTTCTTTTTCAGCACCATCACACAGTACCAGAAACAGACGCTCAA TCGAACTCTACAAACGAATATTGACAGATTTCAAAGACTTATTGGATGAA GAAGGTAAGGTAACTGTGGCAACCTCGTTCCCTACGAATTATGAACTTCT TTTTTTGTTCACTGATGGCGCTAGATAATATTCTCTGGCCTCAATCAGTA ACGTAAATAAAGCCTGGAATACATGGGGATGAGGTTGGTTTTGTGATTGC TGGAAAGCAGGATATGAAATGTTTCATTGAAAATCCGTACAGAAGTGGGG AGCCCTTTCAAGTAAAAAAACATTCTTTGAAATGTGTGGATATCCTCTAG AAAATTTGAAAATTTGCAATGAAACCCTTGGAAAATTTCTTAACATACCT TAAAGTGACGGTGAATTTACTAAATTCAAACCACTAGAAAATTTTCCCAG TTTATCCCCTAGAAACTTTCGTCCAACAAGTTCATAGATATGGTTCAATA AATATTGCATATTATCACCTCAAAATGGGATCATATTTCTCTAATTCCAA ACTCAAATCATTTTGTAAAGGGCTCTTCCAGAAAAAATCCGTTCATGGGG GTGTAGGATATATTATTTTTTTCATGAATTACCCCGGGACATTTGGATTT TTAACCCCCTGGACACGGGTTATACCCCTGGACAAACATCAAATCAACCC CGTGGACACAAAAAATTACCCCTGGACATTGGAATTTACCCCCTGGNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA TTTTTTGGTATTTTTTCAATACCCCTGGACAATTCATCCTCCACCCCCCA TGAACGGATTTTTTCTAGAACAGCCCAAATCAAATTAAAATCGTTTCTAT TAAGTTGCTAAAGTTGCTATCCCGCTAGGCACTATGTGGCTATTCGAACA GAGGGTCTTCGTCAATTTTCACCTCATATATTGTGTGCCAAATTTCATTT AAAAAGATCAACTAGATCAAAAGTTAAAGGTTAGTGTAGGAACCCCCTCA GTTCTGAACCACCCCTAAAAGCCTATAGTATGATTATGCTTAATAAAGCC CTAAAAGTTATATTGACTTTTTGTATCGAGAGCAGGATAGATGTCCTACT TAAATTATCTCTAAGTTCTTTTATATATAAGAACTATATGAATCGAAATG GGTCTTGCGAATTTTTTTTTTTAAATATAGTTATGATTATGTAATGATGT TTTTGTTTACATTTTATAGAAACCCGACGATCCGATCCTAGTATTTGGCG AAAGGATGCAAAACCGGGATTAAGATGGGATGCAAAACCGGGTTTAAGCT GGGATTCAAAACCAGGATTGAGCTGGGATGCAAAAAAACCTGGTTTAAGT TGGGGTCAAAAACGGGCGCCAGGTTTAAGATGGGGTCAAAAACGGGAGCC CGGATTAACTTGGGGCTGGCGTCGTGAATCCGATTACAAGCCTGGACCCG GATTAGCTTGGAAAAGAGACAAACCTGGATTGTCATGGGGAAATGATGCC AAAGTACCAGGACTGTATTGGGGAAATGACCACAAAGCATCAGGTATTAA ACACACACTAACTTATAATATTCGTTGACCGACCTTGAGGTGATAATTGG TTTGAGATTTTTGATCCATTGAGACCTTCTGTGGTCCTGAGGTGAACCTC CAAATATTTTCGCCTAAAATTTTTTAAAGTAAACATAAAAAAATTGAAAT CTTTACTTGTGTTTTCCCCACCCTGGCGCTTCTTTGTTAATACAATAGCT CGCTAGAAAAAATTTTTGACACTCTGAAACTTTTTGACTTTTGACCAAAT TTTAGTGTCAAATACCCACAAGATAAGTTTTTTGCGCAGGCATGCCACAA AATCTAGCTAAATTCCTGTAAAACCTCAAAATTTTAAATTTGGCATAACC ATTGATGTAGTTATCCAATTAAGTTCAAATTTTGACAGGTATCAATGAGA TGTTTCAGAAAATTTCCTATTTTTTCTCAAGAAATGATGACGTCATTATT TTTTGAAAAAAATACTCCTCTTTAGCATAAATTTTGAAAAATAAATATTT TTGCTGTGTTATACATTATACCATAACCCTTTAATGATTAAATAAAGTAG AAAGCCTGAAAATGTCATTGTCGCCCAAACTTTAAATTCTGCAAACCGCT AAAAAAATTAATATTAAAAGGTTCGGAGGGTTTTTCTCACAGGACCGTGA AAGGAATCTTTAGGTCAGAGATCACAAACCAGATGATTACTAGTACTTGA AGTTGTGTATATTTGCCAAAGGCTAGCTGACACGATGTCTTACGTTAAAA ATCCTTTCAAGAATTTGGAACATATAAGAACATCCAAAATTTTTGAAGCC TTCGGATGTTCTTAATTTTTTGAGTTTTAAGCCTAAAAATGTTCTAAACA TGTTCTTATTTTGACCATTTTGTGAATATTTTCCTAAGAAATAGGGTGTT TTTGAGCCTTAAAATTTTCTTAACTTGTTCTTAAAATGTTGTTACAGATT CAAAGCGACCAAGCAGTGGACTTCAATCAGCTTCGGGACGAGGTGGAGAT ACCCAAACGAAAAGAGATTACAAAATATTGGAGAGAATTGAAAAAGTTTT GAAAGATGGTTTGAGTAATTTAGATGATGGCACTGAACAAGAATTGCCGA CGAGATTTATGACGGGCGGGAAAAAGGATTCAAAAGACATCACAAATGCG AAAAAATCAGGTACTAAAGAGAAATTATCCCTCCCACAAGAGAGTTTTTG AAAAAAGATTTATTTTGAAAATTATTTGTACACAAACGGTGTCGCCTTAT GGTCCTAACACGTGTACTCAGAGCAATCTACAATCGGTGACGAAATACTT GGCACAAAAAGGAAATCCACCGGGGTGTTTTGAAACCACAATCGATTTGT AAGTGCTCTAAAGTAGGTTCGAAGGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCAATTTTCGAAAA ATGGTAAATTAGCCAAAAGTGCCAATATGTTATGGCACTGATTGTAGATC GTGTATATTATATATTGTAGTATCAAACAACGAAGAAGTTCTTAGCCAAC TCAAAGATATCATCAAAAACGTTATGAAGAAAGATGACAAAATCGCATCA GCCAATCAGAAGCGCGAATCAGTAGAATCTACCAATGATAAACAAGCATT GAAGCGCGATGCAAAGGATTTGGCGCCACTTTATAAACGTATCGTTGATG ATTTGAACAATGTTTTCTCAGATCCGAAGAAGTAAGAACTGACTGAGCAG TTCAAGAACTGGTTAACCGGCTTATTCATGATATTCATGACATAATGTTT TATACGGAAGCACACAAAACAGCCCGGTTATTTGCCAATAGTTTCATTGT TTAACCCTTTAACTGCCGTTCGTATTTTTTAAGGTTCGATCTATTTGCCA GATGTCGCATATGCCGACATGGGCAAAAGGTAGCGATTTTGACTTCATTT TCTGAATAATATATGAAGTATCAGCCAAGGACTATAATTTTGAGTTGAAC ATTGTTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009851TCONS_00009851Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009851-proteinTCONS_00009851-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:345939..351496 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26 0.31 0.2 0.36 25.17 29.16 221.69 222.65 91.8 99.1 60.32 80.27 0.3 0.28 0.06 0.18 31.58 34.36 0.18 0.43 61.06 55.24 16.2 20.9 31.93 43.14 0.3 0.74 0.33 0.25