XLOC_005509 (gene) - C. hemisphaerica

Overview
NameXLOC_005509
Unique NameXLOC_005509
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:368295..375609-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005509 ID=XLOC_005509|Name=XLOC_005509|organism=Clytia hemisphaerica|type=gene|length=7315bp|location=Sequence derived from alignment at sc0000099:368295..375609- (Clytia hemisphaerica)
GCTTCCACTATCACCATCACCAAATTCTTTCATATCATATTCCAATGATA AATTCGAAACCAAATAAAAATCCAGTAATTGAATCACCATGAAAATAACA CTTAGTACCAGCCCAGGTGCGTTAGCGTACGAAATCGGGAATCCAAAAAG CGAGAAATTTTCATTTGCAAAAGGAATATTCAATAATGGTCCGAAAACGA ATCCAAGTGCAAATGAAAGCCCGATTGATGAAAATTTCCCACTTAATTCC GATTTGGGATAAGCGCGGACAATTTCGGCCGTCATGATAGAGCGAAGACA CCCACCACCGCCAGAGATGAGACGCCCAGTGAACAAATACCACGGAGAGT AGGGTATAGTGTAGAGAATGTTACCTGAGATGATACACAAGTTTCCAATA AGGATCATGAGGCGGGCGTTTCGATGATGGTCGAATAAAGCACCGAATAA CACCGACATTGCAACCTATAAGAGAATTCAACAATTCGAATAATGATATC GTAAAGAATCAACTTGACTCACCAAATGATAGCCTGAATTGAAAGATGCT AGGTATGTGCGTGCTTGACCTCCAAACATTACTCTTAGGGCCGGTCTCCA CTTGCGCGCGCTTCGATCGTACCTTTTTCGAGCAAAGCTTTCACACTATT GTGGTAAAAAGGAAAATGAAGCAACTCCATTGGCGCGATCTAACGTAACG GTTGAAAAAAGTTGAAGCGTGTGCGATCACAGTGCGCGCAAGTGGAGACC GACCTTTATAGAGGCTGATTTTTGCTGAAAAAGTGGACGTCACTCTTTCT TTCACTCGAGTTTGTGAAAAAAAACAGACCCTTAGAAGAGACCAATTTAA ATTTATCTGATTTTTGAAACCCTTAGGCTTAGAGAGACTTTGGAAGGTGA AAAACCCGAGCCTTAATAAGGCACACACATAGCAAAAACACCCATTTTTG CCTAAGTATCCCCCCAGGAATGATAGGCTATATTGGAAAATATAGGAAGA AATCTTTACCTGTGATATGAGATAGATAACCGAGATCGAACTGTAAAATA AATTCAAATCATCTGTTTGTATTACATCTTTCAGGTACATCCAAAGTGTT ATGAAAGTCAACGAATATTCCATTCCCAGTGCGCATGTCTCGATCAAATA TGCGACGAATGTTTTCCGACGTTTTTGAAGCCAACTTTCATGGTTTTTGC CATCCATTAATACCATTTCAAAAATTGATTTAAATCGTAGTAACAATGCC AAGATTATTTATTTTTAGAGTATTATCAGCGTTCCAAGATTGTATGCCTA GCGCAGGCTAATTTTGTCTAGACTCCTTTCTGAGACAATTCTGGAGTCTA ATGTATATTGAGCTGATCAAAATTAGCTTTCACCGATATTCAGCATTACA TAGTTCATGTGACAATCGGAAATTGATATTTAGAAGTTCAACTGACCAAA ACTATTTAGCATCCCTCTCAACAAAAACGTTTGATCACTTTCTTCGAGCT TCACTATTTTCAACTAATTCGACTCACGCACGAACTGAAGCCAAGTATCA TTAAAAAGTGAGTTCTGCTATCTAGAGATTGCGTCAACGACATGAAACAG TTAAAAACTGTCTTCAATTCTCTCGAGGATTTGTAAAAATATTAACAACA TAACAGATGACACTCAATTCCATAGAGGTTGCACGAAAAGTCATTGTTAA AAATCGAGATACAGCCAAAAGAGTAATTTCAAGTCCCTCGTGGGAGCGTA AAAACTTCTGTTTATAAAGAAAATCGATCCCGATAGACCTCTTCACTGCT AGTCCGGGAGCCAAATCCTATATCTCCTTAAATAAGCACTTTTCCAGTCT TATAAAGTGTCAAAATTCATTGAAAATACCCATATTTTCCCTATTGACCC TCAGGTAAACCGCCAAAAATAATTTTTCGCAAAAGTTTTTTGCCATTGAT GATCACCAATCTATCTTGAAACTTTTGGCAATAATGCTTATTATTATTTT GGTTATTTTCCAGGGGGTTAACGATTTTTGTTCAAAAGTGGATATCCAAG GGGCTAAATATCTTTAAGGGAGCGGATATACAGGGGTTACAGTGTCTTTT CAAGTAAAAAATACGATATCCAGGGGTAAGCATCTTTATAAGAGAGGATA TCCAGGGGGTTGAACATATAATTAAGAGTGGATACCCAGGGTCTTTACTA ATAAAGTAGGATATCCAGGGGTTCGATACTTCGAAAAATATCCTCAACAG TGGGGGTAAAATTCTTTCTGGAAAAGTCCATTTGAGAAATTTATACTTTA GTGGATAGGGCATGTATTCAATATTTCATTATTATATTTATTGGGTATCT ATTCGAAAGGAACGTAAGTGTTGCGCGGATTTTTATAGAATTTCATAGAG ATTTTCTGAATTTTCGCGAATTATTATATTTATTGGGTATCTATTCGAAA GGAACGTAAGTTTTGCGCGGATTCTTATAAAATTTCATAGAGATTTTTCA TAGTCGAATGCTCTACCACTGAGCTATATCCCCATGTCAGATTATTTTTG ATAATTATGGTAATTTTTTTCCAAATTTACGACGAAGTACTCCTGCCATA AGGGAACTAATTTTGGCAGTAACTAATTTTCGCGTTTTTGGTTGTCTATC GCCAAAATTAGTTCCGCATAAAAACGCAAATTTGGTACCCTCACTTCGTA CTTTAAGGTAGTCTCTTCACTCGACAATGCAAAGTTCAGACTCTAGTCTA AATACCACGAAGCTCTGAAATATGATGAACTAAGTCAAAAAAATTTAAAA CTTAGGGGACACCCGGGTTTGAACCGGGGACCTCTCGATCTGCAGTCGAA TGCTCTACCACTGAGCTATATCCCCATGTCAGATGACATTAGAATCATAT CTCTATCAGTTTCATGACGGAAATGTTCAGTCTCGCTAAGCTTATATTTA TTACTCAAATCAAAAAATAATTGCTTACTTCCGTATTAAAAAATGCATCT TAATAATGAAAAAAAAACCGCACATAATTTGAAAGCTTTTCTAGTTGGTT GTAAAGCATTCTCCGTTTTTTTCATATTCAATCCAGAATAATTGACTATG TTTAAAAATTCTAAACCTGTGCAAGAAAACAAATTGAACTGAAAAAAACG TAGCATTCATTAAGCACTCTTTGATGCATTCATCCACTTCTTATTAAACC TTTTTGACTTTGGTGCGCAGTTTTTTGAAATTAAAAATTCCAAAGTGCAA TTAACAACTTGTAGCTTGAGAGTTTTATGTTATGTTCAGGTCCGGCGGAA CAACCGTAAAAGTGGATGGGGAGGCTAAAGCCTCAAAATGAGATAAAATT CGCTAGAAATTTTAGAAAAAATCTCATTTACTCAAAAGGTCTCCCGGTAT CGCCGGGCCTGATGTTTATCTCCCTTCGATTTTATTGAAAATTGAATTGA GGAATTACAATAGAACACTAAGCAATTTAGTTTGAATTTATTGCAAAATT TAAAAATATCAATTTTTGCTCATAGACTTCTTAAAAAGGATTTTCAGACT TTTTCGTAATAATATTTTTTGTTCACTGGAAGGTATTCTTTCCNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTATGACGTCATTTTG CCTTATTTCCTTAATATCTCCTGATATATTCATTTTCAGATATAGGTTGT GACCTTTTTCTTTATCAGTATTTCATGCTCTTTTTTTCTTTGAATGAAAC AAATTTTTTTCAATTTTGACGACTTTTTATTTTAGTTGCCATAGTAACCA ATGACGTCAGTTTCCATGGCAACGGGTGGTCACAGCCGGCCCCACCTCTC AAATTTTGATCTTTTACATTCAAGGAACAATATTCAAGCATAAAATCCTT TGCACAAGCTGCTCCACACGGGAAGCTTTTTCGCGACATAGTGGCCCCTA CTAATACATTGTAATATCCCAAAGGGTTTATTCTCAGCAGGTGCCTTATC AAGATGGGTTTCCTGTTTGTTGTGAACGATTATTCAAACACCCCCCCCTC CGGATCTTATCAGGATCCTAATACAGTATATTAGTTTCTGAAAATATTTA CTGCTGCTAAAGGAACAAGTGATACTTTTATGAACCTACCTGGTTATGCA TTTAACACATATATAATTGATATCTACGTGAACATGAACGTTATTTAACA ATCGTTCAGAACACAAATAGTGACGATCTTTTAAAATTAGTCGTTTGTTT CTTATAAGAAAAACGTTTAGAAACGAAAATTTCATGCTCTTGAAATATTC TTTTATATTCAAGACTTCGTGAGCATAAAAAGACATCTATCTCATCAAAA AATTGAGTAATTTGGCTAAGAACATTGATGTATTCTTATTAATAGTGATT CCTATAGATAAACATGCCTTTTTTGAGCTGAAAAGTTATTTTCCAAAAAT CTGCTTGACCCATCTTTTACCTACTTTCATGCAAAAAATCAGAAAAAAAC AACGATCCAATATTTCACAAAGTCCAAAAAACCCTTTTTTAGCCGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCATTCGAGGGTTTATAGTTATGCATCTTTGTGCAAAAAGTC TTAAAGAATGAAAGAGCCAATCTCGAGAAAAGCTAATACCTTAGTAATTG ATAATGTACTTATAAAAAATATCGAATTTGGCCAGTTTTTCTATAAAAAC ACGCCAAGCAACCAAAATTTCATGTCTAAACACACATATGCTTCAAAAGT AAGCCCACGTGAGCAAAACAAACATCTATCTCATAAAAAATTGAGTAATT TGACTAAGAACATGTATGCTTATCAATAGTGATTCTTATAGATAAACATG CGTTTTTTAAGCCAAATAAATTTTTTTGCAAAAATCTGCTTGAGCCATCT TTTACCTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGGTACCCTACTTTCATGCAAAAAATCAGAAAAAATTAA TGATCCAATTTTTCACAAAGTCCAAAAATCCCGTTTTTTAGCCGTTTTTT GGCCCAAATATGCCCAAAAATTTTTTTTTTCGAAAATCGGGATCCGTCAC ATTTTGGCTACTACCATTTTGCACCTTTTTACCAAAAATCAAATGATTCC TATGATTCAATCTCGAGAAAAGCTGGTAACGAACGGACGGACGGACAGAG GTGAATTTATATGACCTCCACCCCACCGGGGTAGGTCCAAAAACTGAAAA GCTTTATCTTAAACTTGATTTTGGGGTATGGAGAATTATAATTTCGAACT CCAACAGCAATTAAGCCCTATCGTTCATTAGAATTCGAGAATTTTTCAAC CCCTTGAATGAATGAATATATGTTGAATATGCATCTAAGAGTATTTCCTA TCTTACAAGAACCCTTTCCTCACTCAACCTTTTGTGCATTACAATTAGAA ATATTAAGGAGATAAATAATAAAGAAATACAAATGGAACATGTTATTGTG ATCCAACTAAAAGCACTCGCTGCTGACGTCAGAGCTAAAATCGCCCCAGT CCTTGAACAAGCCAATCGGATGCTTTCTGTGGTAGTTTGAACACGTGATC CAACCTTTGTTGCTAGGGTTACTATAAGAAATATTTCCTCCATCGCAATG ATATTTGCTGCTAAAAAATCCCAAATGGCCAATAATACTATGTTTACAGT ATGGTTGCCATGGAAATGTCGCAATACAACAAAGATGGCATAATCTAGCA TCATTCCAACGATACAAAACATCGCAAAATAAATCAGTAAATGTTGGGGA ATGGGTCTAAATGTAAACACGATCAATTGGACAACTGCACATGCACCAAA TCCAAGAATGACGTAATTGATTTCAGTGACACCATATTGGAGATATTCGG TTGCAGTCATTGGTAACCATAAATCAAACAAAACCATACAATACATGAAA AGAAGGGATAAGAAAAGGATGAAACAGATTTGGACATTGTGTATCATTTT GAAGAATATATACCATTGGTGTCTTGGTTGATCATCCGAATCTTCGTCGC CAATGGTGAAAGGAAGTAGTCGGCTGGATGAATCTGAAATTATAGAAAAT ACAATGAAAACGACACTTACGAAAGTTTTTCTATTAGGACCTGATGATTG TCGTGCAAAGACATGAAACTCAGAGTACTTAAGAGAATGCAGTAGTTGTT TTTTTTCTTGATAATAACTCTTAAAGTAGAAAAGCGTGGAAAGTTTAAAG ACATAAAGGGTGTATATCAATGATTCCTACAAGGTAATAGCAAGCATACG ATCAAAATTGAATGAATGAAACTTACCAAGATCATCTTTAATCTGACTTT CCTCATAGCCGTCATCACCAATGATTGAATATTGACTTTTACCACCACCA TCAACACCGCCATCTTCGCCACTGCTATCATTACTAATGATTGAATATTG GCTTCCACTATCACCATCACCAAATTCTTTCATATCATATTCCAATGATA AATTCGAAACCAAATAAAAATCCAGTAACTGAATCACCATGAAAATAACA CTTAGTACCAGCCCAGGTGCGTTAGCGTACGAAATCGGGATTCCAAAAAG TAAGAAATTTTCATTTGCGAAAGGAATATTCAGTAATGGTCCAAAAACAA ATCCAAGTGCAAATGAAAGCCCGATTGATGAAAATTTCCCACTTAATTCC AATTCGGGATAAGCGCGGACAATTTCGGCCGTCATGATAGAGCGAAGACA CCCACCACCGCCAGAGATGAGACGCCCAGTGAACAAATACCACGGAGAGA AGGGTATAGTGTAGAGAATGTTACCTGAGATGATACATAGGTTTCCAATA AGGATCATGAGGCGGGCGTTTCGATAATGGTCGAATAAAGCACCGAATAA CACCGACATTGCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009852TCONS_00009852Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:368295..375609 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.74 2.68 1.13 2.38 0 0 0 0 0.07 0.17 0 0.07 0 0.28 0 0.08 0.02 0 0 0 0 1.44 0 0 0 0 0 0 0 2.47