XLOC_005554 (gene) - C. hemisphaerica

Overview
NameXLOC_005554
Unique NameXLOC_005554
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000100:196814..200360+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005554 ID=XLOC_005554|Name=XLOC_005554|organism=Clytia hemisphaerica|type=gene|length=3547bp|location=Sequence derived from alignment at sc0000100:196814..200360+ (Clytia hemisphaerica)
AGACTGTATTCTTAGTCGTTATGTCATTCATAATGGCGGGAATTTGTTTA
GCCGGTATTTTTGGTGCTGGATTTTCATACTGGAAAGATGGCTACCGTCA
AGTTGGAATTACCAAATGGAATAAGCATTGCGGAGATGTAGATGGTTTTT
GTGTTTGTGATGGTATCGAGACAATGCCGAAAGATAGTAAGTTGCATCCC
GGGGggaggtacttaggcaaatggagggtacggatgtgtgccgcccttaa
gggttccttttttggaccttcaaagtcccgctaagggtcacAAAAATCAC
AATATTTCTAATTTCAAAACCCTAAGGGTCACAAAAGAAGGCAAAAAGTC
TTGCTAAGGGTcttaaaatctacaaaatttagtttttttcttcgatttta
gACCCTAAAATTCccgtttttcgaaaatcgggcggCTCCACcccgtcatc
tcgcaaacctagNTCGATAAACATTGAAACggcgttgtgtgccagctgag
tCACTCAACCCTTTCCAGGTGGCAATGTTGAAGGGCATTGGAAAAGTCGG
TGGGACGGCTGTTCGCACTTAACATTGCCACTTGGGGGAGGGGGaccttt
ccattgttttctcaAACATCAAAGTACATGATTGTACTTGTACAGCCCTT
GGAACAATTGACTTAAGTTTAAATACGATGTGCCCAATACCAAGATTGAC
AGAGCTGCGTGATACTttaaaccgtcccagtccttttttcgcacctatag
acaatagaagaAAGTGTCGAATAGGATCGGATTGAATTTAGAAGGATAAT
TTTAAATATAATTAATTGGCACGCGTATAACTGATGAATATGATATACAA
AACCTTTTTGCTTTTTACGCATCCAGTCAATTGTGATGGATCATAAAATA
CaaaacttctttcttttcaCACATCCAGTGGAATTGCGATGGATTATAAt
tacaaaacttttttctttttatgcatccagtgaaatgtgatgATATGGAC
GATATGATCAATTTGATTTTCGTGGAAATTGCATTATCAGCACTTGGTTT
CATCATTTCCATCATGGGATTGTTTGTCTCTTTCATGGGGATATGTTGTA
CTCCATGGGTGGTAAGTAGAATCATGGTCGAAATTTATTGagaattctgt
ttattttaacgtttttcaagatttaaagtttcggcgagaaagtcgatttt
gggctatctctttaactcaatcgaatatttcaatttgagatgggttggca
gacttccaggctattttctgtgccttattggactatttttaaacttttgg
atcctcagatcctaaggtcctaagtcctaagtctagtgttaaaactctac
ccttcgaacctactttagacgacttacaaatcgattgtggtttcaaaact
tcctggggaatttcccttttttctcaaatattacgaccttgCTTGTAGAG
TCTTATTATCCATTGCAAAACTGTGTATATAGACCACTGAGCTGAgattc
ccttgagaacggacaTAGTCCGAAACATgccgggaaaaatcaaaatataa
tagccgcattctttttcaccgtccaacatatATACCACTGAGCTTTATAG
cacccccttctcgcagacccagtaggatattttcagccagtggggaagaa
agtaacaaaaaaaaactcGATGGGCATTGATATTCCTATAttctttatgg
ctggggatttcaattcttttattttaaagtcAGAAAACTCAATGATGATG
GGagaaatagcataatattttgcactGAGGATTGGCTTAttcgattattt
tcagtgaggaCAAAAGTTGGAggatatttttccaccggggacgatatttt
ggccaatttttccagtgggaagggatcccagtgagtctgtgagaaggggg
tggtTGTTTTATATAAACCATGTTGCCAGTTTGTCAACCCAGCTAAGCAA
ATTATCTTTGATAAGAGATTTTCTGAAAGTACATTAATGGTAgaactact
caatagcggtgtaaatttCCTTTGAATACTCGTGATGATGTAGTGCCGTT
TGATATNTATCCATTGCAAAACTGTGTATATAGACCACTGAGCTGAgatt
cccttgagaacggaccgagtccgaaacatgtcgggaaaaatcaaaatata
atagccgcattctttttcaccgtccaacatatAGACCACTGAGCtttata
acacccccttctcgcagacccagtaggatattttcagccagtggggaaga
aaataacaaaaaaaaactcgATGGGCATTGATATTCCTATAttctttatg
gctggggatttcaattcttttattttaaagtcAGAAAACTCAATGATGAT
GGGagaaatagcataatattttgcactGAGGATTGGCTTAttcgattatt
ttcagtgaggaCAAAAGTTGGAGGATATTTTTCCaccagggacgatattt
tggccaatttttccagtgggaagggatcccagtgagtctgtgagaagggg
gtggtTGTTTTATATAAACCATGTTGCCAGTGTCAATCCCAgctaagcaa
aatctttgataagAGATTTTCTGAAAGTACATTAATGGTAGAACTACTCA
ATAGAGGTGTAAATTTCCTTTGAATACTCGTGATGATGTAGAGCCGTTTG
ATATAAATTTTTAAGTATACTGAACgagttgaaaatcaaaacaaaaagtt
tcaaaccatctatttttaaagtcatttttttaCACACCGAATTATTATGC
TCTAAGATAAGAACAGTAATACCGTCttacttcaaataaacgcccggggc
gtttatttactttttttgattctagaaggggcgtttattcgaggggctgt
ttaaaaaaaggggggcgtttattagattATTTGAGTCTAACGTCGAataa
tatttagagcaaatctactttttgttttagttctatACCGGGATTTTAGT
GCATATTTCTTTGGGTCAGCGACTAAAATTGCATCAAAACTGATCTGGTT
ACAAAAAagactaaaatcttccttttcaatcCTAATCAAAACTTGTATCA
AAGTATTtaagtcacaagtttctaataaacgcccctcccctaGAGGGTGT
TCATTTGAAGGGGGCGTTCATTTGAGGGGGCGTTtgttaaataattttcc
tttgagGAAGGGTGTTCATTCGAGGGGGGGGGCGTTTTCGATGTAATATG
GTATACACTGAAGACCAAAATATACCTTTACATTGCAAGCCTGATTCAGT
GCGTATTCCTCTCATTTTTACCATTCCATTTTAGTATTTTGAGATGTATG
ACCCACGTTACGATTACGATTTTGGTAACGAGACTCCTGGTTCTACTCCA
ATAAAATATTCACCTCATACTGGTAATGGTGGTCATGACAACCATGGATT
CGGTGCCGGTGCAAAGAACACCGCTCCTTTctattaaagaaaaaatatta
acttcccagctggcacacaacgttgttttaacgttcatctaacgttatat
gggcgttgtgaacattagatgaacgttaaaacaacgttgtgtgccag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009907TCONS_00009907Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009907-proteinTCONS_00009907-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:196814..200360 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.4	0	0	0.52	0.21	1.35	1.04	23.11	13.47	26.17	40.58	96.77	73.43	0.05	0.59	0.68	0.83	143.35	254.71	1.52	1.7	0.6	0.4	9.86	12.47	16.79	19.7	0	0