XLOC_005602 (gene) - C. hemisphaerica

Overview
NameXLOC_005602
Unique NameXLOC_005602
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:149572..156731+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005602 ID=XLOC_005602|Name=XLOC_005602|organism=Clytia hemisphaerica|type=gene|length=7160bp|location=Sequence derived from alignment at sc0000101:149572..156731+ (Clytia hemisphaerica)
ttcattttcagaaaaataaaaaagtaaacaaagaataGAAATGAAGAATA CGACACTGGTCATCATCATATTATACATCGTCCAATTATTATGTTTGATA CCATTCACATATTCTATAAATGATGCAGAATATATCAAGAGAGGTTGTGA TACAAATATCAGGCTCAAAGATCTGGACAATGTAGACTTTATTATTGGAG GTGTTTTTCCTTCAACATATTACTTTCCAAAAACTGAGTAagttttacgt gttttttataagaacaaactatataagaacatgatgCTTTGATGACCAAA TTTATTACGCAAAGGCAGCAAGAAAGTCGAATAGGCAGTCGAACattatt agctttaaagctagtacagatttgtacacttctttcgactttaaagaata tagaCATTAACATTAACCAAAACGTTAAGAAACATTTGAGGCTTTGCGAG CTCTCAAACATCCGATTTTAtgggaaattgcacaaaaatactcacaaaat agtgaaaaagaagatcattttaagaacatctaaggcttcaaaattttagg TTGATTTTACAAAGAAATTGTAGTTACTCTTCCTCCCGTCCACTCTACCT TGCGTTTTTCGCACAAAACTAAAAGCTTACCTGGGCTAATGAAATGATTC TTTTTCAATATCTTTCCAGCGAAGAAGAATTTATTCGTCAATCTTATTCC ACCTTCGGTTAATATCTTTTAATGCATAAAAGTACTTGTTTGAATTAAAC TTcttaaacttttatttttacacaGTGACACAAGCCTGGAATAGATAGGT AGAACGCTCTAGATAATAAAGACTTTTCAAAATGGCCCTAAATTATATCC CCTGATATCGATTCTGATAAAGCAAAAATTTTAAGTCTAACAGGAATACA TTTATGCACAGTCTTGTTTAAAAACAGAATGAGGATTTGCTATTGAATCT TTTTCCATATTATCCTTTTTCCCATTTCAGCTCGTATGAAACCAATTACG CGGCTGTGACTTGGGTGTCCGCCATGCTATACGCCATGAgtgaaatcaat aaaaacaccaCCATATTACCTGGTATCAGATTAGGTTATGACATTTACGA TAGTTGTGATTCTGTTGAGTTGGGCGCTCGCTACGCGTTGAATTTCATGG TTAACAAGAATTATTACAAAGATGGGAATACGAAATTGATTGGCGTTGTA GGCGGCGCCCTTAGTGATATATCCGCCCTTCTGAACAGTGTCATCTCAAG TGAATACACACCACAAATTTCATATTCGTCCACTAGTGAGGCTCTTTCCG AATCATGGCGTTACCGGAGTTTCTTACGGACTGTCCCCTCCGATAAACAT TTAGCGGCAGCCATTATTGATTTGATCCGATATTTTAAATGGACGTATGT GTCCGCATTCGCCATCGATGATGCCTATGGGCGGGTTGGTTTGGAAGAGC TTCAAATATCCGCCAAGACAGCGGGCGTGTGTTTAGAACACGCCTTAACC ttcaacgaaaaattgaaagaacGTGAGTTAAGCGAGATTGTTGGTCACCT AAAGGAACTGACTCTCAACACGACACACATCGTTATCCTATGGGCTCCTT ACAAAATCTCCGAGAAAATCATGGGTGTGGCGCGGGCTGCGAACATCTCG GAATGGAGCTTAGTCTTCATTGGACCTCACATTTGGACAGATACGATGCA CGAAAGGGAGAACTTCTATTATCGCACCATTGTCACAAAGTTGAAGCAAC CGGTACTGAATGACAGTTTCATCAAAGATATGCAATACAGTTTCGACATT AATTGGGACAATCCATGGATTCGGAAGATCTTCGAACGATCCATGCTTTG TCCGGAAAAGGTCCTCAAATCAAAAGATAAACCACCTATGTGTATGTTCC GCCTTCCAGAACGCATGGCTTCAGCTGTCATCAGCGGTACAAGGTCCAAA TACCCACAAGTCATTGCGGCAGTGTATGCTATAGCCTTAGGTCTCCATGA GTATTTGGGGTGTACGAAGACTGCTTGTCCCAAATGGGATCCTGAAATTG ACTTCAAGAAACTGTTCGAGATCATCAAAAAATGTGACTTTATCTTACCA CCAGGAAGTGAGGGTTACCATATCAGCTTCGATCAAAAGACTGGTGAGAT TGTCAACAAGGAATACATTTTCAACATGCATTATCAAACGGCTGATAAAG CAGTAGGAACCTGGTTTGGACCCAACAACATCGACGCGTCGCCAAACGCC AGGGAAGGTCAGTACCGTCTTCTTCTTTGATCTGCTTTTTCACAGAATTG TGACTTCAATATTAGCTTCAGATACCTTTGCCGTAGAGGAATAGAATAGT GTCTAAGTACTTGTTATCTGCTGGGCTCCAGTCCGCGCTAGACCGGATCT CTAAGGGAACTTCTTAAGGAGACTGCTTTTATTCTTAATCCTTATAGTTG GTTATATCTCCTTACTATCTAAAAGTCTTTTAAAGCATCATtggattatt atttttttaaagctttttcaagATAGGAGACCTTTTTGTAAAACAAAAAA CCTTtttgtaaaacaaaaaataataggTTTAGTAACTTTGTTCGTTGAAT TTATAATTCACGATATTCATGACGTACCGTTTTATACGGTAGCACCCAAA AAAGACCTGGTGTTTACCACTAGTTTTATTGCTTAGATTCGAAATTAGTG GCTTTTTAGGGTGCTTCCgtaaaaaacattacgtcacgaaTATCACGAGA TGTTTAATTACTCCATTTTCCTTTTATtctttcagcctcgttttggtacG AAGGAGGTATTCCATCAGGACAATGTTCACAGGACTGCAAACCGGGTTCG TACAAGTCTGTGGACTCTTCATCGTCCTGCTGTTGGACTTGCCCAAGGTA AGAATCTACCTTTTAGAAAATTAAAATCGAGTACAATGACTCTAGCGATA TTTACTCTAAGGTCGCAAATAGTTCGAACAAAAAAGGAGATtccgaaatt ttttcaaaatataacaacgatgaaaaattaaattttgaaattttgctttt aTCTAGTTTCATAAACTTTCAAGCGGAAAAAACCTAGTGGGAGAAAATGA AATGCGTGCGTTGGACGTCACTTTTACCATTCTTTCTGTAACGTTTTCAT TGTGAACTTTTGGTCACATTCTGTACCGAGTAGTGCTACTTCCCTTCCAT AGGTTATGAAAACATACTGGTCTTTCTTAAGTTGTGCTAAAAGTTAAGCT TTCATCACCACGAGAAAGTAACGGAGAAAACGAGTTTATTATCCTCAAGT GGTGAATTGAATACAAAGCTGTAACCTGGCTACGCCACCGCTTACTGTGC AATTTCCTTAACGTTACCTGCACTGAAGCTCATTCGCTTTAAGAGTGCAA TATAGTAGGGGACCATGCTTCgggtcccgtgacatcttttttacgaccta gccatttttagtctaagTCATTTCTAGTCCAAAGAAcagtagaaaagatg tcacgggagCCCAGgctcgccccccccccctactaaTTTTCTTGTTATCA CGAAGAAACCACTCTCAAGAGAATTAGTAgcaaaaagagtgcacacttat agAGTAAAGGTCTGAGAATGACTGAGTGAATCTTAGGGATTGAATTATGG AAATCTTAGGGAGTAATTTATGGAATCTTAGGGAATGAATTAAAGGAGTC TTAGGCGTTTTCAGTATTATGTATCTGTACAGATTCGAACATCTGCTTCC ACAATGATAGAATTTCATGAAAAAccttaattcatgatatgcaacactgg agaatcttctgagaattttcaaaaatgtccaCCCAATaggtcactttttc tattgtttaagtgacgtattgggtggaaaattttaaaagatctcagaaga ctctccagtggtgcatatcatgaatatcagGAAACTCTGAgtaattcatt tcaaatttcttttcctaGANGGATTATGTATCTGTACAGATTCGAACATC TGCTTCCATAATGGAAGAATTTCATGAGAAACCTTATTATCAGGAAGTTG TGAGtaaaatcatttcaaatttcttcttttcctaGCTGTGGAGCGGACAC GATTAGTTCGACGATCAACCAAGAGAAATGTGTTCCCTGTGAAGCTTCAT ACGAAGTAGCCAGTAGTAATCAAACATACTGTATCAAACTGCGTGAAATC CGCATCAAGTTAGACAATTATATCGGTTTGTTGTTGATCGCGTCGTGCAT CGTTGGAGTTTTGATCGTGCTTTTCGTTATCCTGGTGTTCGTGCGACACT GGCATACACCCGTAGTCAAATCATCGAGTCGTGAAATCTCGATTATCCAA TTATTATCATTGATGCTGTTATTCTGTCTACCGTTGCTCTACTTTTTTCC GCTATCTCCACTGTTTTGTTTATTCCGGACACTTATCTTCGGATTCTTGT TTACGACAGTAGTTGCGATCATTCTTGTCAAGACGTATCGCCTGATTCGC GTTTTTTCGAACCGTTTCACCAAAGTATCGCACTTTTTACACACCAACTA TCAAATCCTCTTCATTTACGTGTTGGTTGTTTTCGAACTCATCGCAGTGT TGTTGTGGAATTGGAACTTCCAACCAGCAGTGGAAACAGACATCTATAAG AGCAAAttgatttattatttgaaaTGTGATTATTATCAGACAGTCATTTT CTGGATTGTCATGTTATATATTTTCATCTTGGTTATCGTGTCCGGCTATT ACGCATTCCGGGCGCGTAAGTTACCGGAAAACTACAATGAAGCGCAATAC ATCAGCTTGACCATGTTCACCGTTATTGTAGTCTGGGTAGCCTATGTTCC ATTATTCTTTAGCCTGGATCCGTACAGCAACAGTATTGCGTTCTTATTCC AGAACTTCATTTGTACGTTAGCAGTGACTTTTATCATGTATGCTTACAAA GTATACATCATTCTGTTCAATCCCAAACTGAACAGCCCTGAGCATGCTCG ACAGCAACATAAAGATCATTTTCTGGATAGTTTACATCGAGATCAGTGGA AGAGAGGTCAGACACCGCCCGAACAAGAACCCTTCCGCCCTCGATTGGCG AGTCTACCAAGTCTTCCGGTTGCTGTTCATCAACCGTCTGTTTTCGATGA TCCGGATGGTGGAGAACCCGGAAGTCGCCGCGGAACGTTACATAAAGGAG AACGACAGCGCCTGATTGATCGTTTACAACCGCGAAGAGCTTCCTTTTCC AGTATGTCACAGTTAGAGAAAATCAACCATCACAAATCGTACGAGACGTT CAACCCAGGGCTGGACGTGCTGAGGCGGGAAATCCGTAAATCACAATCCA CGTCTTTCCTACTGGACGCGAGTTTAAGTGTGGAGATGCAGCAACAACCA CCGCGCTCTGCAACTTCTCATAATGTTCTATCGCATTTCAGTGGTTTGAA AAAAGTCTTTTCGAATGTCAGTATTCATAAACTGCTGGACCACCACAGCC ATCATCACCACCATCATCACCACGAGAAAGTAACGGAGAAAACGAGTTTA TTATCCTCAAGTGGTGAATTGAATACAAAGCTGTAACCTGGCTATGAGCA TGGTACATAAGATAAAAAGATAGGATAATAAAgaagctattcatgatatg caccattgcaatgtcttctgccataacatcacggacccaacagctgattg gttgaaaatgacataaaattagtcattacgtcactttcaaccaatcagct gttggcgGGTCCGTGGAAGACCTTGCAATTGTCTGTCATAATATCAGAAT AGAGGTTCttcatgttttgttaagttacgtaaacttccgccattatggaa gcaaacgttcgaattatGTAAATATGTAGTTGCAATCCCTTAagaaaatc gaacgtttgcttccataacgTGGGAAGTTACGTAACTTTACAAAACATGA GAAATCTCTTTAATATGCAATCATACAGACGATTATAAATCGTTCTTTAG AACGCTAGAACTTTAATAGACACTCACAAAGTGATGATTAGAATTGTCTA TTAGAATACGGAATATATTTTCTTCCGATCTATTTAAACTCGATCGGTAT CGTCGGTATATTTGTTTGTTTCGAAATagccatttttcaattttcccaaA TATCTAAATCCTGTAATTCTTTAAAATATACTAGTTTGGTTTCCATCTAC TTGCCGGCCTTTTATTCTCTGGATTTGTACATATAGGGTTCAGCTGATAT ACAAAGTTCTTCAGTCTCAGCGAGGTACAAAAGGACCAACAAAatttctg caaaatttgaagaatcttgTCTAAAGACCAGGCCCGGtagaacaaccgta aaagtagATGGGCTAAAGGATCTAAATGAGATAGAATTCGCCATATGAAT TGGAGAACAATGTctattttgctcaaaagtggggaggcttcAACCACCGC CAGCCTCCCCGCTTCCGCCCGGCCCTGAAGACCATTTCTGTCTGAAACAA CTAGCTTTGATCAATGAATTTAACGATATTAAAATTGTAGTATCTATTGA CCTAGTTTGTGTAACTAACAGTCATTCCTTCTTTTTAACGACAATGATGA CGATATCTGTAAAACTGAAATGTAAATTTTAAACGCACTAAATTATAAGA TAATTTTATTAACATAAGATTTATTCTGGGTAAAGTTACTAAAGCGTGGT TGGTGCAACCAATACTGGGTTGTTCCATTTattttccatacagggggtgg acgagcCTTGTCAAGCCAACAGTGATTCTTGAAAATATCTGTCTATGTCG GCTGTTCCATTTACTTCCCAtgcagggggtggacgaaccttgaCAAGCCA AAAGTGATTCTTGAAAATATATGGATACCCTCtggaaatgacaaaatttg cagaaaaactctggaaatgttcgttcATCCCActccctgtatggatataa aatggtcCATTCCTGATTATCTAGTGATCATTACGTCATTTCGGGGCGCA AAGTTCATATGATCTTGACCCGGTAGggtttttttcagccagtgggggta aaaataacggatcaaaagtcgatggggattgatattcccatatttcttAT GACTGGGggtttgaattccattgttttcaatccataaaattcaatgggga tggaaaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009977TCONS_00009977Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009977-proteinTCONS_00009977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:149572..156731 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.5 4.75 1.36 0.71 20.92 16.04 9.28 10.57 6.42 8.8 6.47 5.2 4.34 4.48 4.18 6.33 5.56 5.84 6.81 7.74 4.59 4.35 5.06 6.19 7.25 9.01 10.24 9.27 8.2 9.3