XLOC_005622 (gene) - C. hemisphaerica

Overview
NameXLOC_005622
Unique NameXLOC_005622
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:512909..516594-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005622 ID=XLOC_005622|Name=XLOC_005622|organism=Clytia hemisphaerica|type=gene|length=3686bp|location=Sequence derived from alignment at sc0000101:512909..516594- (Clytia hemisphaerica)
CAAAATCAAAACAAACATGGAGTTCCTCAGGTTTGGAGGTGGTTAGACCT
TTTTTGAGGTTTTTTAGATTTTTTTTTACATGTTGAAAGATTTATTGTTT
TGTGTGGTTTGTTATAGCAATGTACATTTATAATTCTTTGCCAATTATTT
TCACTTTACCAATCGCATTCTATTTTCATACGCATCCACCACCATCGAAA
TTTCACCAAGCTCAAAATGTTGGTAAGTTTTTTGTGTTTTTTTCTTTTCT
CGAAATACTGTAATATCTGATTCAAAACCTCCCCCGATTGTTTTGCGTGA
TGGAGTGAGGTGGTCCTTCCTTTGGCGTGATCTTAAGCGTGAGACGTGAC
TGATAAAATAAATCTTTTTTGGCTGGCCCGACTGGCGTGCAGGGACTAGG
TGGGAGACCAGGTGCTTACACAACTTGAGTAAAATAATAACCTTTGTAAA
GTCTAGTGAGTAAGTAAGTATTTCCTTCGTCTTTGAAATACCAGAAAAGT
TTCGATTTCCTTTTCACACTCCGGGGAGGGGGGGGTTTAGGGTTGTAAGC
TGACGGACGGGATGCCGCCCGACTTTCGAACTTTGGACCCTTTCCGAGAC
TAAAAAGGAGAAAACAAATAAAAAAATTGGGAATTTTACGACCCTACGCG
GGACAAATTTGACCAATTTTGTCCAAATTTTGATTTTTCAGGGAGTAAAA
GGTTGAAATCTTTCTATTTTTCTGGCCCTTAGTGGGACTTTGGAAGTCCA
AAGAAGGTACCCTTTAAGGGCGGCACATACCGTACCCTCCATTTGCCTAA
GTACCCCCCGCCCCTGGGTTCACACTACAGTAAAGTTTCGGGAAAGTGAC
TGACTACCAACAAGCCGCCCTCAAGGAACATTTTAAGAAAAAAGACTTAC
CACCAGGGTTGCTATCATCAGATACACGTTTTTTTTTAAGAATCACACTT
TTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAAAAACATCTAAGAA
ACATGCTGAGGCTGAAAATGAAAAAATGACATTTTTAATTCGTTTTTTTT
AAGAACCTTCCAATCAAAACATGAAAAATAGGCTGATTATGTCAAAAAGT
TTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCTGATTTCTCAAGA
AACATTGAGGCTGCTTGGTAAAACTAGTTTAAAAAAAAAAAAACGTGTAC
AAATTTTCCTCTCCTCCAGATAAAGTAAAGTATTTTGTGCGACCGCAGTC
GAGAGCAACCCGAAGGCTCCCTTTTCTCTAGTTGTCCACCCAAAGGTAGG
GGCCGCTACTCCTTTCCCTGGATTTCTCCACTTACCCTTGACCCTTCTTT
TTTGCATTAAGCAGAGCGGCATCAAGTACCATTCTGGAAATCTTTGGTAT
GACCCGGCTGGGGCTGGGCGGGGGTTGAACCCACGCCACTGTAGCTGGAT
GCTCTAACTTCGTGCCACAACACAAGGTGTCACTGCCGCTGAGGAGGCCC
AACTCTTGGACAGATGGAAATGCTGCAACCCCCTAGAATTCGAGGCAATT
GGAGGTTTAAACCCCTCTGGAATTCTGAATTTTTGTTTGAATTCTTTTTT
TAGACACCCATCTCAATGGTCAACATCGATTCAAGCTGCAAAATGATTTA
CTTTCACAACTTTTGGAAAAAACTTTTGGAAGGGAAGGTCGTCTCAACTT
GTTCCTCTTTGATAAAATGACACAAAAATTTCATTCCCTAAATAAAGGTA
ATTTTAGATTCTTTTACTTTTATGATAATTTCAAAATCTTATCCTTCTTC
TATTGCAGTCAGTTAGTGTTCTTTAAGCACTTGTGGTCCCCAGGTTTAAC
TAGGTAGTCAACCGTCCCAACCTTCTTAAAAACTAAGCAAAAGGCAAAAG
CCAACACTACTATCAAAGCAACACTTGAAAATTTAGCCTTGCACATGGCT
TCAAAAAATTAAAAATTTATCTCTATATACATACTTTTCTCCTTTCCTCA
GGCAAAATGTTGGACCTTTGGTGGATTGTCACAGCCTTCACCTCTCATAC
TCTATTTGCGCTCGCTTCTCTATTCATCTATGAACATACTGTACTGGGTG
TTTGCTGCAAAATCGTCGTGTAAGAAAAAAGCATTTTGTTAAACTTCTAA
ACAGTCGGGAAGTGTACTTATAGGTGCCTATTAAACTTTTCATTTTAACA
TTAAAGAGGGGGGTTTGTAGGGTTTCGAAATACTGTTTTCCCGTCAAAAT
CTTTGCTGAATCGTGGAATCCCGGAAATTGAAAAAGAAAATAACACCTTC
ACACCGGTTTGAAAAGCTTGAAATATCGAAATACTGACAAAAAATAAGGC
TAAATACCGTCACCGTCTGATTTTAAAATACCGTATTCCGTCTATTTTTT
CGTCAAATCCCGTAATACCGTACTAAGAAAGGGCCGATCCCGTCACACCA
TAAAAGTACAATCCCCCCCTAAAGAGACTCCACGGTACCATATTTTTATG
GTACACTATCCTCAGATACAGGCTTCAACTAATCAAATTCACAAAACACT
TCTTTTCTACAGCCGCAAGATGTCTCGAAGTTCGAAACTGTTGTTGATGG
TGACTCGAAAAGCATTGAATCGAGAAAATATTTTGCAACGAGCAGACTCA
ATGTCATCAACAAACGAAGATGAATTGGACCTTTTCGTCGAATGCGAAGA
AACATTCGAAAATCGATTAGTGGCTCGCGAAGAGAGTATTCCAAAGGCCA
ATCACAAGGATGAGAAAATGTTAGAAAATAATTCCGACCCTCTATCGAGT
AATGACAGCAATNCCGCAAGATGTCTCGAAGTTCGAAACTGTTGTTGATG
GTGACTCGAAAAGCATTGAATCGAGAAAATATTTTGCAACGAGCAGACTC
TATGTCATCAACAAACGAAGATGAATTGGACCTTTTCGTCGAATGCGAAG
AAACATTCGAAAATCGATTAGTGGCTCGCGAAGAGAGTATTCCAAAGGCC
AATCACAAGGATGAGAAAATGTTAGAACATAATTCCGACCCTCTATCGAG
TAATGACATCAACGAATCGATGCAAGTCGAGAAACGAAAAGATTCGGGTG
TTATTGTTCCGAATGCATCGATTGGAACGATGGTATCGAATGTCGATTTA
GTCGAGAAATCGACCGAAACAACTACCGAGGAATTGATAAGTGCAGCAAA
TATGATGGTTTTGAATTCAACTCTCGCTTATGGAATCGAATCGAGTCCTG
AGAAATTTAAACGGTTTTTACACGAACGAAACGAAGATGTTGATCGATTA
GGAATCAGTTTCGATGAAGGATACCTCGATGAAAGCGATACTGATTTATC
GAATGAAAATGATCGATCTCGACTCATGGATATTTTTGATTTATCATCAT
TAGGTGAAACTGTGATGGAAAAAATCTCTTTGCTTGTATGAATCTAAATA
TCGTTACTCTTTTAGTCCGGCTTATAAGAAAGTACAACCAACTGTAATTT
TAAATTAAGATAGTCTTACCAATAAATACCTTGAGATAGAAGTGTTTTAA
TGGTGCAATTTTTATTTCAAAAGACACTGACTGAGGCGAAATTTTACATT
AGTGTAACATTAGAATCAAAGAAAACACCAATTGGAATTTTATAATCGAA
GATTTCCTCAACAAAAACAAAAATTTGCTAGGGCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010031TCONS_00010031Clytia hemisphaericatranscript
TCONS_00010030TCONS_00010030Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010031-proteinTCONS_00010031-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:512909..516594 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.06	0.03	0	3.46	2.74	4	4.77	4.28	2.45	4.45	4.96	7.28	11.07	0	0	0	0	0	0	0	0.04	0.07	0.26	449.71	271.42	0.08	0.15	0.82	1.22