XLOC_005766 (gene) - C. hemisphaerica

Overview
NameXLOC_005766
Unique NameXLOC_005766
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:94562..98726+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005766 ID=XLOC_005766|Name=XLOC_005766|organism=Clytia hemisphaerica|type=gene|length=4165bp|location=Sequence derived from alignment at sc0000104:94562..98726+ (Clytia hemisphaerica)
CGTTTTTTTTCATCACTCTCttgtttttaaatcttaaagTTTTCTAGGCG
TAAGTCACAAAGTCCATAATAACAATTTCTGTATTAGGTACAGAATGGAT
GCAAACTATTCCATTCAAAAGTGgttcaaaacataaaattataatCAATG
CCAGTACAATTACTACTAAATCTTTGGATCGAAATACGGTCGAGGAAAGA
GAAGAGAGCTTTGCATCAGGTGATGGCGAAGGTGCGATGGTTGATCCGTC
GCTTGTTGATGATGAAGATGCTGAGAGTTCAGGTAAGGATAACCTCTATC
CAAATTCATTCGGATTTACAACTTACTAGAAGTGAAATCGAATGCACTTT
TTtgtcattgagtttcaagccctaaaccacttatttcccatccagaacgc
ccgtgcgtaatttttacacaaacgccggattgaaactaaaacaTATCGTC
AGAAtataaaaaatgtagtcctcgaAAACAAATTAACTTCTAGACACAAT
CCGGCGTCATGATTACATTGCGTTATAtgtgcgttttggatgggaaataa
gtggcaaATTTCTCTTGCTTGAGAAGGATTAAattttcgcctctagccct
tcgggcttgaaactcgatGCATTCTTGTACCTTTAGCTAAGAACTCCCCA
TTACTCAATCTCTTCATGACAAGAAGCAAATTTGTGTTATCTGTGTTCTA
GCCGCGAATACTAGCGAAACAATTACTTTGCATAGATAGACAGTTCAATG
TAGACTTAAAAGTTCACTAATAGTATCTGCGGGCGGTAATCAAACGCGTC
AAAAACTTCTTGGTATAAGAACTGTTGAAATTAAAAACTGTAAGAACTTG
ATCACCTAATCGATCATTAGAGTAGATCTACAGGCctggcggaagcgggg
agattggggagacttcagccttcccacttttgagcaattgagattttttt
cttgaattccTAATTCCTAtagaaaattttatctcatttcgAGCCTTCAG
TCTCCCCACTTTAACACTTGTTCCGCCTGGCTTGATCTAAAGTTGGGTCA
TTAATGAAGGCACATAAATCTCCTTATCAATCTGTTCGTTATTTAAAAGG
AGTTGGAAGTGGTGATGGTTCGTCCAATCAAAAGCCGGGAAACAAACAAC
CAAAAACTACTCCCCAGACCTTTATTGAAGATTCAACTGCCATTTCACCA
ACTGCAATAACAACTTCATCTTCATCAAGCAACAAAATCATCCCATTGGA
ATGGTCAAATATTATCATCACTAGCGTCCCAAAAACAACTAAACCACCCA
AACTGAGTTTCTACAACGAAAAACGGATTGAACTACGTAAGGAAGTTTGA
TGTTTTCCCAGCTGACGCATAGCGTCGTTTTTACGTTTATTTAATATTCA
CAACGTACTCTTGTTTCCCGAATAgacccccccgctaattgttaatcaaa
aaaaatccatcccccgcCCTTATTAATTAAAGTAATTAAAGTCGAGTAAT
TCAATATTTTCCTCTccgttagtattggttcttattttacgtgtttattt
gttaaagttgcttttttgttgttgaaattgatatcagttaaaaaattatG
TCTTCAAATTATCCCCCTCTCTTATTCCATCACCCCCGCTTatttgaatt
tagaaaattttcctacccccctgctTTATTTGGACCCCCctcccgtctat
tcgggagacaagagtacatAATGAGGCCCCTCagcagatttaagatttta
aagtgcgtgattgcgtgatcggaggaacaatcgtgataacgtgatttgga
aattttgtttgCGTTATTGCGTTattgcgtgatttgaaaggtgactggTG
AGCCTCgtcaacgttgaaacaacgttgtgtgccagatgGGAAATACTTTT
CAATTCATACTTGCTTTGGGAAAAAAGGTTACAGTTGGCTGATTATAAGC
TTTTAAAAGAAATAGTAAATTCTTCTGAGGGGTTAAGTGAAAACTTTTGT
CGATTGCCACTGCGAAATACTCTGGTTTTCTTTCCTGTGCTTTTGAGCTC
CATTTTTAGCATGTGGTCACATGTCAGATTCTTAAGAATttaaattaact
ttaaaatccttaaaaagccataaaatatcttgtcaaaaattgtgatttca
attaaattagattttttctNGCCATAAAAAATCTTATCACcgatattttt
gattttgagttgaatttaaattttctttttcaactttAGATTATTATGGT
CCATGTATTTTCTGCAATATTCGAAGCAGTTTATTTTTCGGACAGTTTGA
AAGAGAATTGAAACGAAAACAATTCCGGACAGTTCTACTAAATTACGATT
TCGGTaagcattttttttcattataatcttaaccctttgagtgccagggt
ctttttttctaagtttttttttaaaaatcgctagttcaaactttaagggc
ttatatctcctgatctagaaagaaTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattt
ctaactcaaactgggcattacaggagggcttcgccctcctatatagccca
tgtcgtatatatacgacatcggcacttaaagggttaactaCATTAACTTT
ATCAACAACTATGGTTCCTTTTTTGATACAATATATAGTTTGATATCACA
CTCTCATTACCTTAATcagaaaataatcagaaatctaaaaatctcGGTTT
TGATTGAAGGGGCTAAATCTGTAGaattaagaaaaaatgaaagtttcaat
ttttattaAAGACTTTTCAAAGTTACTTTTTTTATCCTTTCTAGCTTTCT
TGGTGCAAAAATACCCATCAGGAATTTTCGCTACAATATTATCCTTTGGT
GTGGGGCATACTACATTTCCGATGTTTCACTACCTTGAAATAAACGCTCC
ATTATCTTGCAGTTGTTTTGCAAACGCACCCAACACGAGATACATACTGG
CGGGCTCCAAATACGCGGGAAAGTTGATTTTAAACGCGTTTTATCCATTG
TACGAAGTGAACAATTTCAAAGACATTGAATTAATACAAGACGCTATgaa
gaaaacgaaagcgatcaaattcaaataataaaCAATTTAGTTGCCGCTGA
ATATTTGTGTTAAGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010251TCONS_00010251Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:94562..98726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.06	0.05	0	0	0.04	0.05	0.1	0	19.38	19.67	0.22	0.03	0.04	0.11	21.41	31.78	0.09	0.2	0.05	0.05	0.1	0	0	0	0.21	0.32