XLOC_005776 (gene) - C. hemisphaerica

Overview
NameXLOC_005776
Unique NameXLOC_005776
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:573725..578126+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005776 ID=XLOC_005776|Name=XLOC_005776|organism=Clytia hemisphaerica|type=gene|length=4402bp|location=Sequence derived from alignment at sc0000104:573725..578126+ (Clytia hemisphaerica)
TTGACATGAAATCGGTTAATAAGACGTTGAGAAGGTTCAGTGctggtaaa
aagaaaaagaaaggtaGGAAGTTTATCATGAATTCAAGTCTTGATAAAGG
ACCATAAAGGTAGTGGTCCCCTTTAATAAAGAGTAAACAACTTTATACTA
TCATTTGCAATCGTTGACTAAATATAAGTATCTTGTAAGTGAAAATATTC
CAATCTCTTTTATCTCCGTTCTTCGGGTACTAAACGCTGACAGCGGGTTG
TGATTAATAAGTCTCAAGTCTcataaaaaagctctattccGAGCAAAATC
TATCAACAACACTTTTCCTTGTTACCACATAATTCATTTATGGAGACTTT
AGAATAAAAATGTAATTTGTAGAAAAGGGGAATAAATGGTACTGAAACCC
GGGAAATGATAgttactaggtttgcgaggtgacgtgTATGTCCgagacaa
aagttgaaaatcgacccttagagagaggaaaaattggcgtttttgggacc
cttataGAGACGATTTTCATTCGATTTTTatccatattttggaaaaacac
gaccctttgagagaggaaatttcGATTCTCATGAATTTTgcacccttaca
gagactccatttgctttttaatggtttttgtacccctttgagcgACTTTC
GAGGTTGCGAAAAAAgaacccttatggctcgcacatacccggcacccatt
ttgcctaagtacccaccCCCCAAAACTTACAGTATAGGTTTCAAATTTCC
CTATTGAAACCCTCCTAcggtatttaaaaaaaggtttaaacGCCGAATTC
TGAGGATTTTTGATCCTTATAacctaaaataataaaaaacaaagtacttt
cagttttgttttcttttcatttctttgatCAAATTTTCAGATACAACACA
GTTAGTTGTTGCTCAATCGAACGTTGGAGCAAATGCAGTTGAGGAAATGG
AAGGTAAATTCATTAATGTTATTGGGCTGTctcattaaaaaaccatacat
ggggggggggtggtTTACGAACCTTTTCAGCTCAAAATGTAATTATTGAA
AGTGTGtgggataccccctggaaaatggcaataCCCTTGGACAagttctt
ttcataccttaaagtgagggtagacgaactaaaatcagtcttttaccccc
tggaaattttagaataactttttatcccgttggaaaaatgggaaaataca
gcccctggaaatttttctcggattacactctggaaatgttcgtccacccc
ctgaatggatataaaatggaatggcccattaaaGATCCTGTTGTCTTGGT
GCTATGGTGGAAACTTCAAACTCTTGTTTCAAGGCCCTCTCTCAAGCCCT
GGTATGAGATCTCACATCCCAGTATCAGTATCCCGATGGTAGATTTGTCA
GTGTTACAGTAGAATatttacacccctgtatcaataTTCTGGTAAAACCT
TCACTCCCCTGTCTTACAGTCCCAAATGGAACATGCACTTCTCTGTTTCA
CTACCTCTGTGGAAAATTTATACCATGTCTTACTGCCTCGATGGAATCTT
CACACACCTGTCCCAGTGCTCGATGGAACCTTGGTACGGTTTCCATTAGG
ACCGTCTCACTCCTGTCTTGGAACCTTtatacccctgtatcagtgcCTTG
TTAGATCGGATAGATCCCTCATACTCCTGTCTCAGCGCCTTTAAGAACct
ttcacccctgtctcaatgccCTGATGGAACCTTCTCATCTCCTTCGAAAC
CCTACCTCcacgcttcttttttttataagaatacactttataacaatgct
ctaaaaatggcattcttagcttaaCTACCAAAATTCCATGAAGGCGATTT
tattagcattattcttaatgtTCCATTGTTATCaaggacattcttataaa
ttgtattcttataaaaaaagaagcgtgtatgATATTAGATGGACGTTTGT
CGACTGGGGCGGGGACTGTTTAAGAAATTAGATAGCACGCTGATAATTAA
TTAATTCGAGCTCACAAAGAATTACGAAGAGTCTTTTATATCCCACTTCC
AAGATGAGTGAATGAATATATTACTCTGAATTATATAGAAGTTTAGAATT
AAAGCgtttcaaattataaaagttTAACTATTAATTTAAATAATAAaagc
gaccgtagcatgaaggtagagcatccagctacggtgcgtaAGGTTGTGAG
TTCGATCCccagctgggtcataccaaatggtacttgatgcctctctgctt
gatgatcagtaactaaagagacggattaagggtaagtggagaaatccagg
gaaaggagtggcgccctacCTTActttcgggtagacagctagagaaaagg
gagcctttgggtcgcccttgactgcggtcgcaaacttacttacttactta
ttcaATATTTCATTTGCAGGTTACTCGGACACCATTTACAATGAGTTGAG
AATCGTTCTGATTGGTCGAACAGGATCTGGTAAAAGCAGTACTGGGAATA
CACTTCTTGGTCGAAAAGCCTTCGATGATGGAATCGGATTCGATGCAAAA
ACATCCGTCACGCGTTTAGAGCAAACAGAACGTGATGGCCGGAGAATTAC
GGTCGTTGATACACCCGGACTACTAGATACCCGGAAGGAGTTTACGGAAG
AACATACTATTCGGGAGATCCTGAAATGTATCGCCCTGACAAGCCCTGGT
ATACATTCAGTATGTCTTGTTGTTGAAGTTGGTCGTTTTACCGAGGAAAA
TGCAAAGGTATTTGAAACGTTGATTAAACTTTTTGGAGAGGGccttaaaa
attatttaattgtCATTTTCACACATGGTGACCAGTTGAGAAGGAGTAAA
ATGAATATCGAAGAATTGGTCAAACAATCACAAAGTCCAGAGCTGAGGAA
TATAATTAATAACTATTCACAAGATTATATTGCAGTTGATAACACTAAAG
ATTACGAGTCGAATCCGGACGCTAGTCGaattctgatgaaaattgaCGAG
TTAGTCCAACGTAATGGGGGTCAATTTTATACAAGCGAAAGTTACCAAAT
TGCTGAAGAGTTCTTTAAAGAAACGATGCTaaataagaagaaaaaaccAC
CAAGAAAACCACCAAGAAAGAATAAGAAACAACCAGAAACTAAAGAACCA
ACCAAGATCGAATCACGACCGTTACCAAGACTATACGAAGAGCATTCGTA
TGGTTTTTCAAGAGATGGGAAAGTCTCTCATACATCATATTCAGGAGAAA
ACGTATACGACCGACCACCTACAAGAGCTACCGTTAAGAAGAAGGAATCA
GACCGAAACTATGGTTCAGCATCTGGTCAATATGAAGCAGTGACCGAAAG
TCCTCAACAACCAACTTGGTCAGATTCGAATCCTTACGAGAGTAGATATT
CACATATCCCTCTTCCATCGTTGTATGAGCGTGATATTCAAACACCATTC
ACCAGTACTGCTTTGGATGGATCAAACTTATCGGTTCAACAAAGTGTAGA
ATCACCATATCAATCAATGCATAGCCCTGATAATGCCTACAAAGCTCAAA
CACCACTAGCAATCTTCAGAGCTGTTCAATGTCCTCAATACGAGAAAATA
TCTTTAGTAGGCAATGCTGCTGAAAGTCCAAAAGCTGAAGAAAGAAAGGT
CGAAAATCAGCAGGTTGCCAAACCACGTAAGCCACGTAAAGAAGAAAGCA
AGATCCAGTATATGGCATGGTTGACAGATAAAAAACCATCTGGAACAAGC
AGCAAAGAAGAAGAGGAGGATTCGAACCAATCTCAAATCGAAATGGACCA
GCGTAATAGATTTAACTCGCAGTTCATTGAATCTCAGATTGCTTACATGA
AGAAACTAGAAGAATCACGACTTCAGACGCTTAAACCCAAGGATGACGTT
AAGAAACAGGTAGCACCTCAACATCTTCTTCAGGAGCAGGAGGAAGACCC
AGTGGACCAGGCTCCGGATCAAGCTGCAGAAGGGGTTGATCCAGAACAAG
CCAGATATGAAGAAGAAGCTAGAGCCGATTTTAGAGATCAAGTTCAAAAT
GACGATGGAGGATTTTTAGATAAAttgcaaaagaaatttgaaaatcttca
aaaaggaTTTAAAGATATTTGCAAAAAGATAGCAAACATTTTTCGTAAAA
AACGAGGTGAAGCTGATATTGAATAGCTTTTAAATAGTAGGGGATGAAAA
GTCTGACTGGGACTGTATTTTTAGGAAGTATTGTATTAATTTTTCGTTGg
tgattttgatttaaattttcactggagttgatattttgaaatgaaatatt
aCTTGGGTATAAGTTATTTCATTCATCCGttcttaaaaagtaaaaaaaaa
tttattactgATATCATTTTTTGACGAAtccattttaaattttaaatgtt
ct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010272TCONS_00010272Clytia hemisphaericatranscript
TCONS_00010273TCONS_00010273Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:573725..578126 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0	0.04	0.04	0.03	0.02	1.3	1.64	1.92	3.16	1.06	1.64	10.79	8.19	11.01	11.47	6.31	6.61	16.71	18.58	5.65	6.36	6.23	7.79	11.81	12.94	13.75	11.08	16.79	11.67