XLOC_006101 (gene) - C. hemisphaerica

Overview
NameXLOC_006101
Unique NameXLOC_006101
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000118:24055..32147+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006101 ID=XLOC_006101|Name=XLOC_006101|organism=Clytia hemisphaerica|type=gene|length=8093bp|location=Sequence derived from alignment at sc0000118:24055..32147+ (Clytia hemisphaerica)
catcaagcagagtaGACTGATGTTTATGACCATTTTATGCAGATATTCAA ATTTGACCTCCTCCCCCCCCATGGTGCAATCCCAAGTTTTTACAATACTA AAACGCTCCATGTGTGTGGACCAAAGTAACATCTTCATTATCATTTCAGA AAAACTAAAGCAAATTTCCAAAATACACTTAATCAAAGATACAGAcgcaa aacaaaatggcagccAAGTTATTTACAATCATCTTTCTACTGGTCACCTA TTCAGCTACCATTTCTAGCATCTCTGTATCCAAGCAAccgaaaaacaaca acaaagaaaTCACTAACAATAATGGCGGCAGCAATGATGACAATAAAACG CCTTGTCAGCGAAAAATAGAAGAAGATGAAAAGCGAAGAGCTGCTATTCG GAAAGACATGTTAGATTTATTTGGTATACAGTTCCGTCCGAACCCCGATC TTTTCGGACACTTAAGCCGTAACACACTGTCCGCTAAGAAATACATGTAT GATTTATATAAAACATCAGTGACGTCAGACTGTGTGACGTcacaaccaaa acaaacgaACGTTACCATGGAAATGATGAAAGATGCGGATACTGTGGTCA GTTTTGTCAACACTAATGGTGAGTCAGCAAAAATACTTTATTAACTGTTG ACAGTTAACTTTTACTTTTGGATCTTATTTGACAGGTTTCTCTgttattg cgaagcgaatatacatgagcgaagcagttttgctatcgtgtatatgtacc tttaaatctcacctacgctggggagcgcaaatgaaaaattacNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG AGAGACctggaattacggatggttaaattcgtttttttcaaaaagtgtcg cctcgtgcgtttagatataccaattcttaaaagctaAGGAGATAATACAC GCGGTCACCAGTACTAGATAAGCCTTGTTTTTATCTCCTtaaggtttaaa ttaggaaatctaaagaagaggtcggaaaatcagcgcgggctggaagcgtt caagaagcgttcaaatggcgctcatttttcaagaagtcattgcattgact cgagCAAACTCTTTCGAAgggctttcgaacttttccaaattcgaaaGTTG ACTGAAAACaacattgttttgaaaagagaaattggtgttttgaaaagaga tggtgcttgatgaaaagaaacgaagaaagcagCTGAACTTGCGGAATGAG AAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTATATCTC AGTTTTCtttatctggtttttctttatttttatctcaggattttacagcg ctaatagtttagatataattttagaactttgttaaatttAGGATGCAATG TAATGATACAATATATATTCCTAATTAATATGGTTATCcggttattgaat tttgaaactacttaagtcaacttatttctattaaattctagtcttgaaat cctctgtgtttcacatctctgtctcaataaaccgagtgatgtttaaagtt tgtttaactttttttgattctctgggctctttgcaaggaagaccttttga agaggctagagaggtattttccctcccgggaagaaattattgccaagttt tccagcgggtctatgacacaggggtgtttattaGTCAGGCACATCCCGCG ATCGCGTCatacaggggtgtttatgttaggtaaaaagtttttgaatgtta tttttattcgaacgttcgaacgttcgaaatttaaaattaattagaaagat tcgaatgttcgattttgaacgcaaaagttcgaaaccggaagtaaaacgag tctaaaacaaaaactaagaaataaaaatactcaaggctcagggcggacaa atgattattgaacttttcacAACGATTCATGAAAAAAACCATATAATTTT CCTCAAATCCGTAGAAGTAAACGTCGTAAAGAGGCTCGGTCTTCCTGAAC CTGAGCAGTTGTCGGGGTTTCGCGGggtttacatttacgaattgatcatg aatctattttaacttgcaatttctagtgtgtgaccctataaatattttgc ttgcaacttgcgaatcgagtgacttgcctggatcgcttcgcaattcttat acatatacactagttcatgatatgcaccactggagcgTCCTCcatgattt tttaaaatttccacccaatacgtcactttttctactttttaagtgacgta ttcatgatatgcaccattgcaatgtcttctgacattaaaTCACGGACCCA ACTACCGTGAGTATCAAAGCTCGAACAAAATATcgaatattttaatattt tctctatGAAAACTTGGCTTCTGGTACTGTAAAATTAGtcaactttcaac caatcagctgttgggtccgtggaagacattgcaatggtgcatatcatgaa ttggatggaaaattttaaaagttctcagaagactctccagtggtgcatat catgactTTGAGCGCTTGTTCATGTACGGGGGGGGGATGACCAACGAATT ATCCGTACTTCCCAAGCAGTTCCGCAGAAAAGAGggacgcaaaatttgtg taggaaagcagatttttatgacacagtaatattttcttataatatgaaaa gataataacattgtcataaaaatctgccctcccacacaaattttgcgccc ctcttgtctacCCTACTACCCAGGGGGATCGACCCAGGTAGTCGGCGGGG ATGTACCTTCATGTATGTATAGATTAGCTTTAAGACGCGTCGAGGCTTGT GAGTACTATCTATAATGGAAAAATGAGTCATAACAAAAAATCGCTAAATC TTCTGTAATAAAGCGATTTCCCtatcaaaaattttaacactGTCTTCTCA ACAAATTATCACCTTTCTTTTAATCAACACAAACGATTATCTCGTCAAAG AATTCTTAAGAGAGAgatttaaatcttcaaaatcctTTAAGAATTTATGC GGATTTTCATCTTTAGTAGTAGCgcaaatattttgacaaatcatctaaaa aacatttcaattaaTTTAGCGTACGTGATCACTTCAACCAATCTGAACCG AAATTCCAATGAGTGAATGAGTTACTCCTTtcatctcatggttgattgaa attcgattgacgtttttgcttacgttaatttgtaatttcccgcaaacctg taatttccctcctagcttttgtaattcccctcctagattttgtaatttcc aacaaaagtgaaatttccatcgtttggaaattcaccatctttttcgaatt tcttactaacttcgaaggcttaagtaaatggaataccATCCATCtaaaac tcgattcgcgtttctatgacttttttgaaacctgtttttaaagtttcaga ttgatttccagtgttaagTTGACGTCTTTCAGAGTTGTTAGAATTACAAT CCAAACCATGAGgttaaccaggaatcccatgcttgttttcgtgaaattcg ggataaattaccctcggtcaaatttcgaaatgttttaaatttccaaaGCT CACGTATAGGGGTTAAACTACCATTTTGGCTagaatttcaaattcatttt attgaCGCGACTATGATTTATTTAAGACCGCTATCATTTTAATTTGATGT GATTatagaagagagaaaaagaaaaaggggCGGTTTGTAAAAATAAGTAA TTTAATTTACGGTTAGTTATACAAAATGATCAttgaatttaaaagatttt ggagCAAGATAAACATCTGTGGCACGTTCTTATTNGATCAttgaatttaa agattttggagCAAGATAAGGATCTGTGGCACGTTCTTATTGTTGGTTTA ATCAAATTTAATGTTCTTTCCAAACCAGCGGGAGGGATAGATTGATAAGC TTCTTGatatcaaaattatctttttcgtgatattcattacttaatgtttt ttttacgGAAACACCTCGATTTTTAACCAGTAGTGACAAATTCAAGctac agaaaaaaaagtttaaaatttgccacttctggcattccatagaaaacatt acgtcacaaaaatcatgaattccAAAGTGCactattgaaaaattttcaag taaATTTATGGTGCACGAATCTAAGCCTGTACAAGTTCTTTTGTTGTGTT CTGAAGTCAGATATAGATAACACATTATTGCTCCAACATGTGAACAAACT TCCCTGAGACCAGCCATGCAATTACAGTGGGCATTAATGATTTCACAGTC TGCTTTAATTGAAGTCCAATAATGCAGTGCAGTTTGAGTGAATTGACTTT GCCCATGCCTCACTCGAACATTACATTCTTTGCGACCTTACCTCGGAATC CTGGAGATGTAAAAATACTCATTATACACCATATAAGCCTTGTTGTCAAC ATACTTTTGCTCTAGATACCCGGGATGATGTTGTTTCACTATTTCTATTA GAATTTTTACGGCTGTTGAAACTGTACATACTTATCCCGTCGATTATAAC ACGCTAAAGGTGGAAAAATTCGTCGGataaaaatgacgaaaaaacCGTTT AGTGAGGGCCGACGGATAATGTAGACATATTAGATCTACATCTAACTCTT TCTCGGACACGTCATTCATGCAACATAATTCACAAAAATGTTCTGCTTTA AAACCAAATTGATGATTCTCGTTTTGTTGCTTTTTAGCCTTGGTTCCAAG ACCCAATATAAGTGATGAGGATGGAAGTATGTATTTTGACGTTCAGTCTA ATTTTGTCGTGAAGCGTACACTAGCCTCTGAGCTTCGTCTTTACCTTGAC GCATCGAATAAAACCGTTCCTGATTCACGACTCCGTGTAACATTGTACGA AATTGTTGTTCCAAAGAAACGGTACCGAAAACTCGTTTCCATAGAGATTA ACGCAACAGAATCAGCATGGCATGGTCTCGATGTCCTTGATGCGACGAAA CGTTGGAAACAAGACTCGACTACTAATAATGGCGTCTTAGTAGTGTGTCA GACATTGGATAAGAAAATGAAATCGTTAGCTGATTGTGgattggttgatt ttaaggGAGAAAATGAGAATAAACCGTTTTTGGTCTCGTTTTACCAATCG GGAGACGAAGAAGAGATTTTGGCTGAGCAAGTCCCTTggaaggaagaaga agaaatttacAAGAGCAGTGAGCATGCGCGGAGACGGAGAGCGCTTGAAG GGCTAAAAGATCTGTTCCCGCAGGTGGAAAATATCGCGTCCGGGTTTGGA GGTATGTCCGGAGGGCCTAATAAGAAGAATACGtctatttgtaaacgaaa accACTTTTTATTGGCTTCAAAGATTTGGGATGGTCGGATTGGATAATGG CACCTGAAGGATACAAAGCGTCCTATTGTGAGGGCGAGTGTAAGTTCGCC CGCCATGATCACTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCCCGCCATGATCATTCGAACGAGAGCACCAACCACGCCCTT ATACAAACACTTGTTAACCTGATGTTCCCTAAATATGTACCACCGCCCTG TTGCGCCCCCATACGGCTGGAACCACTTCAAGTTTTGTTTTTGGATGAGC GGAATAATGTTATTATGAAGAAATATGCGAATATGGTTGTCAACGATTGT GCATGTCAGTAAAAATATTTACAGCAGTAGTGTACATGCGTAGTAAATAA TCGTTTTATGCGCATACGTAGTATAAAAAGATATTACgcttagcaaaaaa aaacaattgctAGATATTACGCATTCATTTATGCCGTAATGCAAATATGG AGAAGTTCTGAGGAATAAAATTGCCGAGTTTATGTATgagtgtttttctg cgacggagacggtaaggttctagtTTGATCCTGACCAACtaaggacgacg gtaaatcaccacttttaccgtcctcgattttgcaggtcagaactgcgggt tattccaaatcgcctcagtcactttaccgtcctcaaaaacGCAAAtccat aaactcgctattattgAAAGCGCCATAGTAATGGCAACACATGTTAGAAA TTGAGAGACCCTTACTTATCATACAAATGTAAGGACATCTTTGAAACAAG TTAACGGAAAgacttttgatttttgtgagaGAAAAACGAAGAGCCAAAAa gagttttatttattttttttgtagttTTACGTTAGTACTAAAGTTATCTT AAATGAACTGAATATAGACTTTTGCgggaatttcttaaaaaaaggctaag agatgcttaggtcgaaagcttaataaggctgaaaaatgcttgagggatgc ttatatcctaatacttaatactgcTTATACTGCTATACTACTATAAAACT ACTTATATCCATTCTACAAAGTAacttatacttttttcataggctcgagg taatgcttagcatatgcttaatttttccccatatctaagcctagatatgc ttacaagtgcaatgcttataaaaaacatgtactagTTTTGCGAGATGATG GGTATGGCCGAGCTAATGTTCAAAAATCAACCCTGTGACTATTGGAAgag attaaaaatgtttttaaaatgttcttattttcaccattttatgagtattt ttgaaacatttctgCGATCTTCTAAGAAAGAGGTGTTTTAGAGCGTAAAG CCTTGAAATACTCATGAATTCTTTTGGCCGTCGAAACCCTGATGTgctta tacagtttgttcttataaaaacgtgtatctagaaaagaaaatattgcaCG TGCGGGAAAAACAATTGTCCTGGAATTCTGCGTCAGTTTCAAACATTTTT GGCAAGAATTAATTTTGACGAACGACCCATTTCATAGGCGTAGcaagata ccctgcaaaatttatggatgagagtggtttttacgacactgtaattattg tctttgttttatcaaaagataatgaatgtcataaacgtctgcactccttc ataaattttgcagggtatctcgctacgcctatgcatttttgttcaatatt ttagctgaagAAAGAGGGGAAAAGGGttttaggagaaatagagactaaat tgaaagaaaattaaatttgacgggaatttgGTGAAGAacctataaattta aatttggcggaaagaaattttttcccttaaggtaaattTTATTTAAGACG ACAAATGTAAGGAGCAGGTTTTCTAATTTGGCTTTCTAGAAATCTCAAAC CCTGTTTTGAAACCTTCAAATCGCCAGTGGGAAACCGTAGATTTAAGCAT ACTTTAATCGGAATATTTTTCGCGAGATTTCATTTCGTaaaaaaaaaatc gcgaaaacttcgatatttattttgaaagataattttaGATATGCGTATCc caaagaaaaattattgaatGTGGCCCTGTAAACATGGTGTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010860TCONS_00010860Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010860-proteinTCONS_00010860-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118supercontigsc0000118:24055..32147 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BMP8Bbone morphogenetic protein 8B preproprotein Homo Sapiens
BMP8Abone morphogenetic protein 8A precursor Homo Sapiens
BMP7bone morphogenetic protein 7 precursor Homo Sapiens
BMP5bone morphogenetic protein 5 preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.1 0.21 0.24 1.89 1.43 2.39 2.88 2.6 2.68 2.37 3.09 15.8 16.1 3.81 2.74 21.05 19.58 18.69 23.05 15.19 14.34 3.99 5.29 15.21 12.24 1.59 0.65 0.13 0.1