XLOC_006102 (gene) - C. hemisphaerica

Overview
NameXLOC_006102
Unique NameXLOC_006102
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000118:36727..41207+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006102 ID=XLOC_006102|Name=XLOC_006102|organism=Clytia hemisphaerica|type=gene|length=4481bp|location=Sequence derived from alignment at sc0000118:36727..41207+ (Clytia hemisphaerica)
ttccaatttttttcttggTAATTTATTATGcatactttgaaaaattttca
aagggcCCGGTAAAATAATAAGCGCCACACACAATTTTTCCTTTCGCTGG
TGGTTTATTTTCAAACAGCAAATAAACTCTGATTGGCCGGTTGATAAAAC
TAAGAATAATAGAATGTTTTCTGATTGGTTAGGGTGAACTGGAGTCTTTT
GTCTACTTCTGGGTAGAATAAAAATCAAGGTTAttttccccggggggggg
ggggNcacagcggagcacccccgtcggtcgacaagggtagtacccccccc
gggttatTTTCATTTGACCTCTTCATTGTATGCAAGCAGTCAGAGAAGGA
AGATGGCAGAAGAGAGAGAATACACTCTGATCTGTGAAAATGGAGATGAT
TTGGTTGAGCGCACAATCAAATCTAGCAATATGAACATTGAGATTATAGG
ACTTGCTTTCAAGGTTAGTAATGTTCTTTCTTCTAACTCCAAAAATGTCC
TTTGCGACTTTTAAATATTATTTatgaaaacatcaaaagataaaaataaa
atctttcattGTGTAGGGTCTATGCGCCTATGTTTAGATTATtctttcct
gaaaaaaatattctttaaccCTTAGGAGTCGAAACACGTATAtgtacgtt
ttgaaaaggtcattttaccgatacacagtcttttggtcataactcctgac
cacttgagattcagagaaaaaaaatctgctattttttgtagctgagaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAatcctttgtcctggtcgagaaattgcctttgaaaa
aataaatttacagaaaaaaatgatgaaatttttggcctttttcaaaaaag
acagcggctttgaaaggttaaggAAATTTCGGTCATTTTGTGGAAAAATC
TtcattggaatttttttaattaattaaatttAGATTTACTAAATTTTact
aaaaactgaaattttttatcaattttaactttcgcgaatacacgtttttt
acaagaacattcaaaatcaaAGAAGCCTTCAATGGtcttaaattttttgg
tttcaagccttgaaattttcttaattaaGTCTATTAATTTAAGTCTCAAA
AATTTACTCATAGGGGTCTTAATTGGCTCTAAACGCGATTTTCCACTTAT
TAGGTCAGCTGGCTGTGTACATAATTATAAACAaacaaatgttcttattt
ttatagtcttgaagccttcaaatgttcttaaaggcctgtttccatcgatc
gcgcgagcgtgcacgctaggccaaaattcttaaaatagatttggccgcac
actccgcgcgatcaatgtttgatttccatcaaaaacatacacaatctgta
tgtttacatttttttgtttactcagcagTTTTTCGCTTTCTTGATTGGTT
AAAGAATTGTCAATTGAGATGTGCGCTCCTGTACGCTCAAAacagttgaa
aattttcagcgtaGAAAAGAGCGCAAAAGCGTACAAGAGCGTACACATTT
TGTGtacaagaaaatttaattcgTGACGTCAATgtgctattttaggaaat
tttgccctaccgtgcacgctcgcgcgatcgatggaaacaggccttaaCGC
GAATGGCGACCTAGCATTTTTCGCGGAACTTAATATTCGCGATTTGGCCA
AACATTTAaagcaatttttgtgttttcagAGAAAATAGTTTTCTTCCTCA
AAACTCCTACATCAATCGATCGACAAAGAGTTGATGTTTTGTTATGCTTT
GTTTTATAATTTGTTTGGAAAAGAATAAACAAAGTTATTCTGAAGAAGGG
TTTTTTCTCTCCCGAAAATTACTTataccaaaataattttttttgtaatg
ttTATTTTGTGACTTATGGCTTCTTGGAGCTAGgcgcaaaaagttaaaaa
aaaagtgatttGCCTCAAGTCATCACTGCGATGTGATCCCTAGCTGAGGT
CAGTTGAATTATTATAACTCTTGTTAAGATCAACTTGAAATGGAATCCAA
AGTTTTTTATGGCTTATTGATTTgatatgtttttgttttctcgTTTACAG
CTCGTTCCATCCTCAATCTATCTAGTAGAGAGATATGGATCCAATAAGAC
TGAATTCCCATCAAAAGTAGACGGAACCTTTAAACTTCGTGAGAATGAAA
CTACACATTTCACCGTCGAAGGAGAAAAGAAGAACTCAAACTCAACAGGA
GCCTCAAACCAGTTACCAGGATTACCAACCCCATTTCAACAGCAGTTGTC
TGAGCCGTTCCGACGTGTTGGAGGAAGAAACAGTCTACCTGGAAGGTAAG
CAATCAGGCAATTTTCTAAGGCAAGGCTCTAAGTGAAAGGAATCAATCTT
GGATTTTCATAGATTCAATTAGTAAACATTTCCCCCATAATTCCGGAATT
CCTGATTTATTCCGACTTTTTTGCTCTCAGTTTTTTTATTAGGAGGCAAA
CAAActcgtttttgttttcattcctATTCAGAATTCTAAATTTTTCTCGG
TTGTCATGGTAACCTTCGGAAATATACATGAAATATACAGAAATATAATG
GGGTGTGGCGAATAAAAACTAAACAataattttcactattttttatGGAA
GGTGGTGTTTTGTAGAATTagtactttttttttaattaagaaaaacaatt
ttaacatttttctaaatcttaCTGTAAGAAATTTATCTCGGAAGTTAGTG
GAAATTGACATGAAAATACAGTTTATGTAAATTGTTGAATATTTCACGTT
TTCAGATTTTCTGTAAGCTCCACCTCCACTTCACGACAGCGAAAACGAAC
TCAAGATTATGTGAAAGTAACCGCTTCTAAAAGAAACAATGGCAAAAAGA
AGTTCCAAGTAAGTTAACATTCAGTTAtgtcaacttcataaaaaataagt
ttcaatTTCATGTCCACACGTACTTCAACTGGTTTCAGATTTCACAAAAA
ATCCTTCTTTTATTACTCTCAGTCTAATAAAGGCTAATTATTAGAAAGTT
GATTATTTCGTTAATGATCTGGTTGGGAATTTTTAAACCTAATTTTAAAA
GTTGTAAAAGTAATAAATTATCCAccttaaaaaaaataagaataaagtGC
TTGATTTTTTTAGGCAAGGAAGATCGTTCACAATACATTAGTATCCAAGA
CGAATGCTCCGTAGAATCCATTACGCGTAAAGTCCGAGATGGCTTCAGAA
ACCAGTCCTTGATACTAGTAGACACCAGTGGTGACAAAATTGAAGAAACT
GACATAACTAAAGGTAAATAAAATCGATTAGTCCTGAAAATTTTTGTGAA
GTTCTTGAAAGGTCACAActtagaaatattttcaaataaaatattggTTA
GAAATATTACAGTTTAGAATGAATATTTTAGAATACtgtaaaaataaata
caaatgaAGCTACAATATATACACGAAGTAATATAACTAAAGTAATAACT
TTATCAGTTGACTTTAAGGTGTAAAAGGTAAGGGTAAGTGATTATAAAAA
CATACATTATATAAAATGTCATTTGTGTTATAGAACTATCATTTTGGACA
GCTAACGCAAGGCGCGTTTATGCTGTGGATCCTGAAGATACTGGAAACAA
AGAAATGACAGGAGAAGCACCGATTCAGCAAATGCAAATGCATCCAATGA
TGGTCCAACAGCTACAAGCTTTAAGTATGGTTTCTCAGTTTAATTATTTG
AATTCAagttattgaaataaaatttaggTTTCTAGTCCATAAACCAAATA
TTTCTTCAATGGAAAAGGATTGTATTGCAAAACCGTGATTTATCCATATT
TATCACATTTTCATGTCTATTTCAATTTCAAACCAATGTCAAATTtctca
ttttcctttttcagatACCGAAGTAAGACAGCTTAAAGAAGTGTTAAATA
ACAACATGGGTGTGATATCAATGACTGGGATCACAAATGGAAACTTGGAA
AGTCTCAGAAGAACGCTCACAAATGGTATTAAAAGCTTCAAATTGGTAAA
CCCTTTGAGAGAAGCTACAGAATGCAAAATTTGCCACGAACGAATACGAG
AAGGACCCCTTTTTTTCTCACAATGCTGCAAAGTGTTAATAGCATGTAGC
CTATGTAACATTCTCCTTGGAACAGAATGCCCATATTGTAGATCTCCAAA
CTTCAGTACGCTTGGAATAAAAGGATTTGATGCAGTTCTAACCATACTGG
AAGAAATTGAACGAGAGTGAGTTTAGGAGAGTGAATTTATATCTTGTATA
GTAGTATTCTTGTATTTTTCATCTAGATTTTTATCTATAGTTAGTCTTGT
GTTTTTACCAGAATTTTATTTCTGTATTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010861TCONS_00010861Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010861-proteinTCONS_00010861-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118supercontigsc0000118:36727..41207 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.03	0	1.16	0.75	0.11	0.22	0.23	0.46	0.43	0.16	0.12	0.29	0.22	0.12	0.18	0.13	0	0.15	0	0.04	0.03	0	2	2.2	0.18	0	0.12	0.04