XLOC_006478 (gene) - C. hemisphaerica

Overview
NameXLOC_006478
Unique NameXLOC_006478
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000130:535796..538365+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006478 ID=XLOC_006478|Name=XLOC_006478|organism=Clytia hemisphaerica|type=gene|length=2570bp|location=Sequence derived from alignment at sc0000130:535796..538365+ (Clytia hemisphaerica)
aagaaaattgtacaaaatcagatttaatttttgtttgaaatttctttatt
tagttcagaaaaagatcaaaaatatgaaaatattgaagatgCCATTGAAC
TTCAAATATATCTGGACATCAAGCTACTTTGGTATTTGGAGAGATGAGAA
TACAATGGAGGTCTTAACAATTTCTCGCGAGATGTTTTCGTTTCCACCAC
GCATGTGCTATCTTCTGGGCGATCTTGTGAAATGCGCTCACGTTTATTGA
TGTACAGGCTAGCTTCGGTTGGTTGGTACGGAACACCGGCTAATTTGCAG
TTCTCAGCGATGCGTGCACGGTTTGACATATCTATCTTCCATGCTGGAGT
GTACAGTTTTGGAATGACTGGATGGTAAGCAGAGAATTTGGATGTTTTAT
CCTCCATGTTGGTGTGTTGTACGTTGTCCAAAAGAATTGAGTTTGCAGGT
TGGatttctttttggttttgttagttatttttgacgtcaaattttcttta
aataaaatattttgacgtcaattcttCAAGCTATTTTGAATACAAGACAT
CAGTTTTTTGAACGGAACTGTGAAATCTCGCTGTTAGACTCTATAATTTT
AGGACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCA
CGTCAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCA
CAGAGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGG
AAACACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTA
CAGCAGACGGCTCGATGAAATTGACAACCCTAAACTTGGGTAAGATAACA
TTTcctaattattttcaaactttttgcaTCACTTGGCAATTTTATCTACT
TATTTGCTATCTTGTATAGATATTTCAATAGTCCattagaaactttaatt
ttcaaaaaattaaaagtcttATTCTAGAGTTAGAATTGGGATAGGGAGTT
TTCTTGAGAGAGAAATATGCTTGCTAGTATGCTGAACTCTTCATCATTTT
AGAGATGAATTATTGAAGAATTACTCATCGAGCAACTCTTTCCAATTCCG
TAAATCTGCTGGTCCAAACGGGACCGACCAACTGCCCGGAAAACTTCACA
TGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAACGCTACCTTGCTCA
CGACAGATCGGGGAAACGTTGAAAATCAATGCCACCAATAAGTTCAATAA
ATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGTAAGATCTGGGTTAC
TTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGAATACAACAGAGTTT
GAAGATCGTATCCACGAGCAAACACAACTCACATCTAAACCAGACATTGG
TCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAGCAAGGAGCCAATCA
CATACCGGGAAGATGAATGTTATGGAACGCAGAATGTCTGTCGAAGACCA
ACAGGTTCTTTTCACATAAATTCTACTCTTTCCACATTGAAATCAAGTGA
AACAGTCGCTCTATAGTTATCTTCTACTTTGCCATAAGAGCCAGTGAAAC
TCAAACATTTTAGGTACTTTCGCATGATTATGAGTTTTGTCCACTCTACT
TAGTTAAGTCGCTGAGTCCAGTAATTCATAACCTCTCAAAAAGGCGCGGC
AatccttctttaaagattttttgatatAAATTTCGGTTTTAACAACTCTA
AACCTTTCCTCCTTTCAGGTATTTCAAATATGCGAAACTCATTCCAACCT
TTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGC
CGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATG
CGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACC
ATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTT
GTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATC
CGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAA
ACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGG
GCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACA
AGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTG
ATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCAT
TGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTC
GAAGCAATGCATCACGGGATCCATCATATGTTAATTAAAGCATTGATTGA
AATGATTTACTTAGGGAAAGAAAGTtgattaaaaatttaaacaaaaacaa
tgcTTTGATAAATTCTTAAACTTAATGCTAAAATCGGCAAGATGTGACAC
TGGTTCAGGATCCCTTATTcgttttttttggacctacctggaggtcctat
aaattaacctttgtccgtcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011558TCONS_00011558Clytia hemisphaericatranscript
TCONS_00011559TCONS_00011559Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:535796..538365 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64	0.38	0.22	0.19	4.69	3.18	2.23	2.54	1.17	1.64	1.37	1.06	0.36	0.31	0.23	0.58	0.64	0.51	0.64	0.53	0.37	0.36	0.76	0.46	3.9	4.01	0.69	0.33	0.29	0.44