XLOC_006549 (gene) - C. hemisphaerica

Overview
NameXLOC_006549
Unique NameXLOC_006549
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000131:136357..143096-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006549 ID=XLOC_006549|Name=XLOC_006549|organism=Clytia hemisphaerica|type=gene|length=6740bp|location=Sequence derived from alignment at sc0000131:136357..143096- (Clytia hemisphaerica)
ACACAAATGTTTTTTAGGAAGTTTATATTTAGATAAAGAAAACAATACAA ATCGAATGATTTGTAAGCAAAATATATACTGCACAAGAGATAAGGGTTTA CGTAAATCTATGAGAAATATTTTAGAAATCAAAATTGTCGAAGCCCATCT TTCAGTCAATCGACAACATCAAGGAACCAGTGTTAGTCGCTCGCTCACAA AACTTTTTCTTTAACAGCAGGTTGGTCGTGTTGATCTTTTTTCGCGCTTA ACCCATGAACATGTTGTGTGTACTGGCCTTGTGTGTTACCAGCGGGTAAA TATCTGGAAACGACGTAAGTTCCACCTGTTCCTTTAGCAACACCGCAACC CAATTTAGTTGAAGAATCCCAAACTAATTGTGTGAAATGGCCAATANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNGGGGGGGGGGGTTGGAATAAAAATGTGCTGGGTGGAAAACT TTTTGAAAAGGTGGCTAATACAGCAGAATTAGGACAAAAAAGGGAACTTT TAGAAACATTTTCCAAAAAATCAATAAGCGGGGAGGTTGGAATAAGAATG CCCTGGGTGGAAAAATTTCGAAAAATTAATTAGCAGGGGCGGGGGCGGCT ATTAGGTACCCGAGAGTAGGCTTTCTCATTTTTAACTGTCGAGACAGATT CAATTCTATAATTATAAGAAATTTCCAACAGCAGCCTCAAGCCTTGTTGA AATATCCACTTTGTTAATTTTCTTTCTACAACATCTTTTATAGAAGAATA CCTGTGGTTTCAGAATTCTGCTTGGAATGATATACAACTTGAAGGCAAAG ATTTATTATACACTGGATAAACGACTCATAAAACGATGGAGAGCGATCAT TGTATTTTCATTGTTTCAGAAAACAATTGATGTTCTAGCTTTGTCCGCAA AGGACAACTGTCATGGTGGCTCGAAGATGTCTGATTTTTAAAAGTGTTTA TCAGTCTTATTTAAAAAAAAGTTCTCTAGCTCTTCCATTTTGTACATTTG CAGAAAAAAAGTTTGAAAGTAAGGCTAGAATACCAAGCCTGATACATTTG TGAAAACTGGTGTGAGAGAATCATCATTAGACAAGAAATTCAGACAAAAT GCTTATAGTGACACACAATTTTCAATTGGAAATATCTTTCCAAGACTGTC CCCAGAAGAGCTGAAATTAACATACATAAGACTTGAATGTCTTAGCTCCA CTGTGGTATGAAAATCCTTTCTAGGCACGCGGTGGCAAGGTGTTTTTTTA TAGGTTGAAGTTTGAAAATTTCTGGTGTCAACATTCAATTTCTTATACAC AACACGTCTTTTGCATCTTTCTCACAGCTTGAAACGTCATAACGACTTGT AATTAGCAGTTAAGTGAAAGAATCTGACTCTCGCAGGAAGTCTCTTTTGG GAATTGGATGAGTGATTTTCAAAAAGAAATGCAATAAAAATGCTTCGAAA AATCGTTTAATGAGGGAAGGAGAGTGAACAACAATAATATCATTACTGCG GACATAGCTACACACGAGAAATCTACAAAAATCTGCTACTTGTATATCCA GTGTATAATAAATCTTTGTTGAAGGCATTTGAAATACATTTGAAACTTAG CCCTCAGAAGCCTCTCAAAGACAAACTTTCGAAAAAATTCCACCGTACCA ATTAAAAACCTTGACTGAGATATTTTTTGTTATTTTCTTACCATGAGACA ACAGCATTAGTAGAGGTTCGACTTGCTGAAGATGACCAGTAAAGATTTTC ACCGACTCCAGATTCGTAGCCATTGTATGTTCGAAAAGCATCGTGTTTCC ACTCGTCGAATTCCAGGAGATATTCTGCGTAGGTTTGAGCACGTTTCGCG AGATCCATGTCATAAGTCATTGAGGGTGTGTTTCTGTGGAGTCCTCGTTT TGCATTGTGAGCTGCCAAGCAAGTTGCTTTTAGATAAACAAGAGAAAAAC GATACATAACTGTAGCTTAACAAACATTTAATCACAGGCTATAAAACATG TCTGGTAACTTCTTTACTATAATTTTTTGTTCATTTATCGCCACTCAAAC GAGATTCAATTTTTTACCAGCTTTCAGGATTGAAATTCGCTTTCCAAAAC TTGGAAGTCTTGAAGTCTTACCTTTGATGCTTTCCATCTCTGAGCTTGAA ATTTTCGGTTCAGCTGTCACATAAGCTATGAAAAAAAAGTATTGAATATT TATCCCATTTTTGTAGCTAAGTCTAACTGGTCTACATTGAGTCTTAACGA TAACGAATGTTCTCAAAACAACTGCCTTGCAACAAAGCATGATGGTTAAA TTTTATTTTGGAGATTTATAAAAAGTCTAAAGGGAGGTTCTACTACTGAT ATATTGATTTCGATTATATCTTACCAGGAGCTGGGTCTGGTGAGCAATCA CCGCATGTTTTCCGACACCAATCCGTCTTCACAAAACTGTGACTTTCACA ATATTGACGCAAAGAAGTTGGACAATTTGAATATTTATCCTTGCAGCCTA AAATATAGACGTTCGTTATTTTGGTATCGGCTCAAAGAAAATGAGAGAGA ATAGACTTGACACCAAGTGGTTAGCTGTAGTTCAGAATGTAGAAAAACAT CCCTCTGTCTCAGTGACCCGGTGCTGTAACAACTCTTTTGCTAATTGAGA CAGAATGAGGATGTTAAATGCAATGTGAATGGGAAATTGCCAGTTTTCAA TGAATTTGGATTATATAACATGTATAAATGTTGTTATACCTCAAAAATAC CGCTCGTTTTCTTAAAATACAATGTCTCTTTGGGAATACTAGTAATGATA AAAATAAAGAATGAAAATACGGGATTTTTAGGGTTTGCTTTGCATAACGA AAATCTTACTGTACAAAATATTTAAAAGGACTCACTCAATTCATCATGGT ACATTTCTTCAACATATTGTGCATCTTCTTCGGGCATTGGTCCATCATAA CCTTGCAAAGAATTATGGGTATATCATTATGGGTTCAAGTGTCAAAAATA TGCGTCTCATGAAAATTTCAAAGAATGATGACTTTGGAAGGTGTAAAATG AAAAAGCCGTTAAAAGTAGTAAAAGAACGGCAAGTTTTACTTACTTGGTA ATGTGTTGACCTTTTTGTGATCTTGGTGTGAACGTTTGACATGTTTACCT TTAAAAATCAATAGAAAACTTTGAAAGTTACGCTTCGATTTTCGCGTTTA TTTTTTATTCGGTCTTCATAGTTAATGAACCTTAAATCAAATCATAATCA CTTTGGCTTGTTTGCGTACAATACGTGGCTTACAGGTAAACTTCGGCACA CTTAAGGACTCTGATCATAGTAAGAAATTAAGGGATTTTTCTTTTACAAA AGTTGTTTATTATTCATCCTGTCAAGAGTAATTAAGAACTTTAAGAATTT AGTTACAATAATGACGTTATGGACATGTTTTTTTTTGACTGTACCAAAAT TAGGTTTTCGAAAATCGTGAAAATCACTTTATTTTAATTATTTCGTCATT CGCATGATGAATTTTCCCAAGATTTTGATATGTATTGAAATTTGAGAAGG GCTTTAAAATGAGCTATTTGAAATTTCAAAATTCGGAGTATTTCAGGATT AATTAATCATGGAGTGTTTTGGATCATATCTCACTCCATGACTCATTATT CGGTCCTGAGGAGGTTTCTATGCATTCCTGAGGTAGCCTAAAATCATAAA ATAGCCTGAGGAGTAATTTTTTTAAAGGTCGGAGTGAGTTATGATCAAAA CAATCATCACGACTTTTTTAATCATTTTTCACTCATTTTAACAATTCCCT TTTTCTTCAGTTCGTTCCTTTCTTTCAACTAAACAAAAATCTCAAATCAC CTCCTCGATAGATAGACTTGTCAGGAAAATATATACGATTAGGATTAGCA CCTAGATTTCAAAAATGATCAATTTGATCCCATTTTCCTCCGGTTTTTTC CAAAAAAAAGAGGTCGATGTGAAAATTCAATCCTTTAGCTACACCNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAC ACCCTGATATAAGTTTCGTATATAAATTGGACACGACAAAAGCCAAATAT AGAGCCGACTTTATAAATCCGAAATAGACTATGATTTTTTTCATCCTGGA ATACTCCGGATTCAACAAGCGATATCTTAAGTTCCATAAAAGCTATTAAG ATTGGACAAAAAGTATCGGACAGAGCTACTAATATATTTTCTTATTTTTG AATAGCGATAAGAAAGGGTTCAGCTGTCTCTGTTAGTGCCGATTTGAACC GGGTTGATTGAAAATCGGTATTTTGGTACAGTCAAAAAAAAACATGTCCT TATGAACTTTAAAAAGACGTTAATAAAATGTTATGTTACCCTCTTCATCA AAAAGTGCTAAGTTTTATTGGTCATTTAACCTTTTTGGTTCGAACATATT TTAAGTTGTCCGCAAAGAATTGAACTATTTGAAAATTTTCAAATAAAAAA CGATTTTGAGGCAAAGAAGCTTTTACTAAAATTTTCCGAAAATCTCTTTT TAGTTTGGTTAAAGACACACCTTCTAACGCAAAAAAATTTTCGAAATGTT TTTTCTTCGCCGAAAATAAGGTCCTCAAAGGTTGAAATATAATTCTTCGC ATAAGTCTTCATTTTCTTCTCCATCAAAATTTTTCATTATGACTTTTAAA TTTTCAGATTCAGGAAGAGTTGGCCTAACAGAAAATGTTTAAAATACCAT AGTTTTGTTGGTTACATTTAAACCTTTAGTAGTGACACAGAAATCAACGA AATAGGAGGCAATTTCATGCAAAAATCCTAACCAAAACAATAACCAGGTT ACACGGAAAATTCGGGTCAAAGAAGCTTCAAAAAGTTAAAGTTTCGATGA AATTGCAAAATGACATAAGAAAACTCACCTTGAGTGACTGTAGCAATTGC AATGACTAAGATAAGAAAAAGCTTCATCTTGACTTCTTCCCTTCTCCTCT TTACTAAAAACTCAGCTTAGAAAGACACTCTACTTCCTCTGTACCACTTC CTTTTATACTCTCTTTCTTGACACGTTCTATAGAACCAGATGAAGACATA CCACACCCTTTTCAATGTCTTTGATTGTAATACAAAATATATTACTTTAA TCGCTCGGTGAAAGGTAATCGTGGATACAGATGGTTAAAATCTCTTATAG TGGAAGATAATTCTTTCCTTATAAGGTAAATGGATAAGGTTCAAAGCAGC TCTCCACCTTTGCGTTCAAATACGTGACGTGTAAATGTTTGAGGTGGCTC AGCGGTGCTGCTAAATCATGCTACCTTTCTTTTGTCTCACTTGAACAATT CGTTTAACTGAGATATACTAATTAAAAATATGATACCTGTTTTTTTTTAA TATAAAAATTCATCCAATAAAAACGATAAACTAATAACATACTTTTTATA TCAGCTTGAGCTTTAAAAAACTACTTTAAAACACCACTAGACACAGTAGA AAGGCGTGGCCTACAGATAATTGTTTGCCTGGTCGCGGGAAAACTTCTTT GGACTGCCGTGGTTACAATGTTTCGTATTCCAAATAAATCTTTTTATCCA CTACAGTACTCTGCTATTTGTAAATCTTATCTCCTCTCTCTCTCCTCTCC TCCCTTATCCAACACTGATCCGCGTCTAGCTCCTTTATAAACGTCACTGT CAAACACAGTAGGAAGTATATAATTTACGTCAAGGCTAAAAAGTTTTTGT CTTTTCCATGAAAGCGGATCTTTCAAAATAACTATGGAGTAAACAAATAA AACAAGTGAAAAGGAAGCAAAATATAAAAATAAATGCATGCAAAATTGAA ATAGGGTATTGGGAGCATAGATTTATAAAGCCCAAAGGGCTAGATGTCAA GCTTTTGCTGAAAAGTGTGCCCAGGTTAGGTAAGTAATCTTACCTAGGTC AAGTGAAATTACAATAGAATTTCAGCGCTTGAACAATAAGAAGTTTCGCG TGTTTTCGAAAACAATAGCAGCAATATTTTTTGCAACATTCACTTTTTTT TTCTTGGAAACATCTAGACATCTAGCCCTTCGGGCTTTACAGAAATCTGT GATGTTGCCAGCGGGTAAATATCTGGAAACGACGTAAGTTCCACCTATTC CTCTAGCAACACCGCAACCCAACTTAGTTGAAGAATCCCAAACTAATTGT GTCAAAAGACCAACAACTCCACCGTTTGACTTCCCAGATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011671TCONS_00011671Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:136357..143096 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77 1.14 0.76 1.43 0.23 0 0.22 0.2 7.22 6.81 2.77 5.01 0.37 0.63 0.16 0.66 79.37 103.3 1.77 2.13 59.04 58.09 131.22 176.43 93.75 136.3 19.89 19.77 0.37 0.45