XLOC_006550 (gene) - C. hemisphaerica

Overview
NameXLOC_006550
Unique NameXLOC_006550
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000131:154136..160092-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006550 ID=XLOC_006550|Name=XLOC_006550|organism=Clytia hemisphaerica|type=gene|length=5957bp|location=Sequence derived from alignment at sc0000131:154136..160092- (Clytia hemisphaerica)
TGTTGATTTATGCAGCAGATTTACAATGGAACCATTTACCTTTATAATTT ACACTATTTGTAAAATTGTAGTTGAGATTTCATAGAGGTGACATTGAGAA TGTCTTTTTCTTGAGATTACTTTTATGCTGTATCGGAGGTTGTATTGAAT TTGAGCTCTTTTTAATTCGCAGACCATTTTTAAGATCTTCATAAACTTAA AAAATAATTGTTCAAAATGGCAGCTGTGGAAGTGATGGCAACATACCCAA GTGACAGAAACAAACTTATCGCTGAGAAAAAGGAAAAAGTTGTTGTAAAA ACTATTCAAGTAAAGTTCTTTCTGTTTTGTGTTTTTTTTTGTGCTGATTT CATTAGCTTTAAAAATCGTTGATATATTTTGATTCTCAAAGAAAAATTCA AAAATAAGATTTTAGATCTTTTGACTTATTCAAGAATAGTAAAAAGTTTT TCTATACTTATATCTATGCTGTATGCTTCATGAAGATAATGATATATAAT ATTTTTGTTTTGATTCACTTTTCAGATGGAGGTAGAAGACAGTAAAAGCC ATGAAGGGCTGCAGCAATATTATATCACAAAAATTGAAGAATCGAAAGTA ATTATTCTAATCATTCTAATTCTGAAATTCAAGAAATTATTATTTCAGCC CATTACCCCATTATGTACATACACAACTTTGTATGGAGCTGTAGAATCTT TTCATTTATTTATGCACAACTCACGGTATATGTGATTAAGAGTAATAGAT TTAACCGATTAAACAGAGTAATAAATTTAACCTTGATTTAACTTGTGTTT TAGATGGAAGTTGCTGACAAAGTCAAAGATCTGCGACGTTTAGAAGCTCA GCGGAATGAACTCAATGCCAAAGGTAAGTGATTGATCTCAGAATTTAACC TGATTGAAATATTAATTTTAATTTTATCTTATGAATAGAACAGGAAGAAA AAAACTTAAAGTATTTCTCTAACTTCTTCACTTTCCTATCTAGATTAATT CGTGTTTTCAGTTATATATACTTATACAGGATGTCCTAAAAAAAAAGTAG TGTTTCAAGCCACTTCTCACTAATACAAGTATCATGAAACTGATATTCCT TTTGATTACTTTGTACGAGACAATCTTAGTATGTTGTTTGGCGAAAAAAC TTTCAAAGAAATATATCGAGATTATTCCCCTGTTGCATTAAATGATATTA TTAGCTTATAAGTTTTGCGCTTTGTGTTTTACTATTGCATTATTGTGATT TGTAAAAAAAGTTAAGTCTTATATTGTTGTATTTCAAAAACTTTATCATA CGCACAAAATTCTTTTTGTATTCCTGACACAGTCCATTTTTCAACTTCAG TTGAGCTAGAATCTGAGAGTCTCAAAACTTTGAGACTTGAAAAATTATCA GATTTGGCTGAAATTTGGCACACTTGTTCCTCGGGTGAATATCTGGGGGT GTTTTTTTTTAGGGAACACCCAAATGATAAAATGACTTCTTTGTTTTAGC TTAGTAGTTTGCTTTTTTTGAGATTTAATTTTCAAATTTTATTATAATTT TCCTGGATATTTTTCAGTGCGTATGTTACGTGAGGAGCTACAACTTCTTC AAGAGCAAGGTTCTTATGTTGGTGAAGTTGTCAAGCCAATGGACAAAAAG AAAGTCTTGGTCAAGGTTTGATTATTTTCTTCTTTTGCTTGCTTTTCAAA TTATATAATCATTTGAAAGTATGATCTTCAACTAGTTTCCTCGATAATTT GGATGTTATACTATAGAACTCTGAGGCTACTTGATATCACTTCATGATAT TCTTAATTCTGATTCTATCGGATGCTACGAACCTGATGCTATTACTAGAG GAAACTTTTCATGTCACATAACAACATACTTTAGACGTACAAACTTTCGC GAGCAGAAACGATTTTCGCGAATTTTCGGCACATTATTATCCTTTAATAC CTTTTTAAAGTCGTAGAACAGCTGTCTTTAGCGGATTTCAGGAATATTTT TCACTTTTAAGGCAATTTTTATTCGAAAATTTTAATTTTTATCCAACGAT TCGTGAAAGTTTGTTCTTGCAAATTCGTGAAAGTAAATGTCGGGAATTTC GCAATTTTTCGACCTCGTGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCT AAAGTATCTTTCTTTTTGGTATTTTCTTAAGTGTTTCCCTATTGGCCTGT TGTTGCATTGTTCTTGATTTCTGTTTAGAGTTTCCGGGTAATAACGCAAT TACCAACCATTTTTAATTAATTCATGGACTTTTACTTTGATTTAGGTTCA CCCAGAAGGAAAATATGTTGTTGATTTAGACAAAGGAATTGAAATGACAC AAGTAAGTGGGGATCTTTATGAAATAATATTGTCGCTTGTGTTGTGGACT CAGTCAGTAGAATATTAGTAGAAATTCAAGGGTGTTCTGGGCGTGTATCT TAAACCACCTAGACTTAACTCAGTGACTAGAAATATGAGTACAGTATCAC GAACAAGAATTTTCTACCCATTTCAATTTGTAGCTTTACTTTTTTGTAAC TTTATTTTAGATATCTGCCAATTTGAGGGTGGCTTTGAGGAACGATAGCT ACACATTACATAAAATTTTACCAAATAAAGTAAGTTTTCGTTTTACTTTT CTGATGAATGAAATGTGTTAAACTCTTTTATTGGTGTAATGAAGAGTATT GACTGATTTATCTTTTACGTAGTACATCCCTCACCCGGTAACCATAAAAA ACATTGTAACAGTAAGTATAATTTTTACACCCTCCATTTTAGGTGGATCC TCTGGTCAGTTTGATGATGGTAGAGAAGGTTCCAGACTCCACTTATGAAA TGGTCGGTGGGCTGGATAAGCAAATCAAAGAAATCAAAGAGGTAAAATAC ATCGCATTGAAAATTTTCCAAATAATGCACAGCTCCGGGATTAGAGGGGG TTAACAAATCTGAATTTAAATCTAGACGTTCCAGCCTTGTTTTAGGACGC TACCATAAGTTATAGTTTGATAATAATGCTTATATTTAATTGTGATTAAT CGATTGCAATTAATTTTCTTTCAGGTCATAGAGTTACCAGTTAAACACCC AGAGCTTTTTGAAGCACTTGGAATCGCTCAACCCAAAGGTGTTCTTCTAT ACGGACCACCAGGTACGAGTTTTTCGATTTCCAATAACTCCAATACTTAA ATCTCATGTCATGATTATTTTGGCTGATGTTTGTACGACTTTCAATCCTA CAGCTCATTTCGAAATGATTTGAGACATCGTGAAGGCTCTCACTACTGTA TTCTTTTTATATCGAAAGTAAAAAGTCTGAGAGCAGTTGATACAAAGGAT GATGGGATTGAAAGTTTTACAAGCAAATTATGATAGAACTAATCTGTTTT TTTTTCATTGTTCCTTTTTGTCATTCTTTCCTAACTTAATATGATCTTAT GATCTTATGTTTGAGATATTCTACCTCGGTAGGAGTTGAGTTTTTGTGAT TATAATGATTCTGCTCACACAATATAGCCATTATATTATATAAAGTGAAG TGAGTATAATAATACCTCTTTTTTTACGAGAACCATGTTTTGAACTAAAT AATCGTATCCCATAGGAACTGGAAAAACACTTCTTGCCAGAGCTGTTGCA CATCACACCGAGTGTACCTTCATTCGTGTATCTGGCTCAGAATTAGTACA GAAATTTATTGGAGAAGGTTCAAGAATGGTTCGCGAACTTTTCGTGCTGG CCAGGTAAAGAATCAGAGTCAATATTCCAACTAATTTCACTCGTCCATAA TATTTTCCTTATTTTTCTCCTCTTCTTTGGTACAGTTGACTGACAAAAGA TTTACCTCCGCAAAGAGTTGTATATTATTGGATATTATTTAGGACTCGTC TTATAGAAAAACCGCTTTGTTGTAAAATTTTGTAATATAGTATTTCGTAA ATTTAAGTAGAATGTGCCTGAATGTGCACGATCCCCCTTTTTGATAGGGA GAGATTCTAAGATTTTCTAAATACAACTGCTGAATATCTAATAGGTAAAT CCTTTTGAAGTTTTTGAATGACAATTATCTGAAATGACCCAAATGTAATC CTTTGAACTTTACCCTAATGTCTCTTATAAAACTAATTTCTCGTCGAGTT TATTAATAACTGGTTTGGAAAATTTTTTGAGAAGGTGGGCCTTTCACTAC ATATTAAGTGAAAAAATACCTTCAAATTAATTGGAATTTTTGTATTTTCA GGGAACATTCACCTTCTATTATTTTCATGGATGAAATTGATTCCATTGGT TCAGCACGTATTGAATCTGGAGGCTCTGGTGGAGGTTAGCTCAAATAAAC AATCTTTTCTTTTGACTTTCCATCTTAAATGCGTCAAGAGAAGATTTCCC AACCAAATACCATGAAGCACAAGCCTCTATTGACAATTCATTTGTTTATA ATTGTTAGAGTAGGCAAAAGTGGATGACAATGCATTGGCTCTATAGACAG ACAATTTCCAGCCCAATTTATCTCATAATTAGAATTGACAGGACAAAAAG TGTGGGCTAGGTCTGAACTAGTTTTCAACCGTCGCTAGTTTATGGATACA AATGAATGGGTTTGAACGTTGCTCGATATTTAATGACAACCACATTCCCT TTTCAGGCGATAGTGAAGTCCAACGTACCATGTTGGAGCTATTAAATCAA TTGGACGGCTTCGAACCAACACAAAACATTAAAGTCATCATGGCTACCAA TCGAATCGACATTCTCGATAGTGCTTTATTGAGACCTGGTCGTATTGACA GGAAGATCGAATTTCCTGCTCCTAATGAAGACGTAAGTTTTGCGATATTG CTGGTTAGAATATTTGTTTTAAAATGCAGATTTAAGCAATTCAAAGCCTT ATAAACGTATAATGTGAACTACTAATAGAACTATGGACAGTTTTTTCAGC TCCCTGTTTACTGATCGACTACACTTGCCGCATTGTATTTTGATCAGTAT TATTTACTCAATCTACATGAATTCGATACCTTTTTCCAGGCTCGAGCAGA CATTTTACGTATCCATTCGCGAAAGATGAATTTAACTCGTGGTATTAACT TGAAAAAGATCGCCGAAACAATGCCAGGATCATCTGGTGCCGAAATTAAG GTAAGTGACCACATCTTTCAGTTCAATTTTTTTTGTTAAGTTTCAGAAAT AAAAGTCCGTACTATATATAATATGGTATCTTATGTGCCCAAATCATATC AAAGAAAGCGAATCAATATGAATGTATCAAGTTGATATTGAAGAAAACAA AAGAAAAGACAAATATGAGGGAAATCTTTAGACTACAGTATTAAAACTAT TTCCACCAAATGCAAATTGTTCAGTGCACTGATATTACTTCATTCTTGGT CTTAGGGTGTTTGTACGGAGGCTGGTATGTATGCTTTAAGAGAACGAAGA GTCCACGTCACTCAAGAAGATTTCGAAATGGCCGTCGCCAAGGTAAATTT TCACTTTCAAACACTTTGTTGAACGTGGGGCCGTCTTACATATCATCAAT GAAGTTTTCTTAATTTTATCTATTGCTCAAGCTTAGATCATGCTTTAATC TGTATCTTTGATTCCATTGATTGCAAACAATAGACCCATCTTTTGATTTA CAAGATTAACATGGATGCTCATATTTCTAAATTTTCAGGTGATGCAAAAA GACAATGAAAAGAACATGTCCATCAAGAAGTTATGGAAATAAATACCACA AGCCGATCGTTAATAATCATCCAAAATCGAACTAATTGCCCATTTTTGCC CGTTGTTTACTTTAACAAACTTTTTAAAGATTTTTTGTGAAAAAAGCAGA CCTATCCAACTTTAATAACAGCCAAAGAGAATCTTGTTCAATTTTCAATT GCTATTTAATTTGTATTTTTTATGATAAAAAAAATTAACTTCGGTAAACC AAGTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011672TCONS_00011672Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011672-proteinTCONS_00011672-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:154136..160092 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PSMC526S protease regulatory subunit 8 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
260.05 263.6 330.75 337.78 330.21 268.68 271.21 285.58 231.71 212.87 207 214.29 197.22 210.61 204.47 206.76 222.91 238.81 138.48 146.08 215.57 208.35 165.71 175.53 270.07 260.81 228.01 232.81 131.8 132.07