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Sequence
The following sequences are available for this feature:
gene from alignment at sc0000143:504287..508574+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006918 ID=XLOC_006918|Name=XLOC_006918|organism=Clytia hemisphaerica|type=gene|length=4288bp|location=Sequence derived from alignment at sc0000143:504287..508574+ (Clytia hemisphaerica)
caaatttatcaattagaCACCAACATCATAACGGACCAAAATGAAATCAC
AGCTATATTTACAGATGGTATTGCTCGTCGCTACATCAGGTAAGGAAGAA
GatagctttttcttttttcagtacGAATTGGGTTTGTTACTTATAATTTT
GACACGAACCGTATTCATAAATTTCACCAATTGATTTGAAGTCAAAAACA
TAAGAAATGTTATTCAACAACAAATTCTACACCAAAACTACAATCTGcgt
tcaaattttttgaaaattatgtttCCTCACTTTTTGAAATTAGAAATTTA
GGTGAAAAAGTCACTCTTGTGCTATCCGTTCaatgtaatcgaatatttca
acctGGGATTTGGgatattttttaaactttttgaatcCTCAGATCCTTTG
GATCTAattcttaagtctagcgttaaaactcagtgTTACAACTCTACCCT
TCTAACTaggttagagcgcttccaaatcgtttgcgACTTTAAGACTTCTt
gggaatttctctttttttctcaaatattacgaccataaTTCTAAATATAT
AGTCCAATCTTATTTCTAGCTTTTGGGGGTGAGGGCACTCAAAGCAAGCG
ACCTACCGTAGGTGCGGCCTTTTAAGGGTGCGTTTTAAGCTTCCCAAAGT
TAacaaaaagggtcaaaataaatagaaaatgcACTCTCAGTGTGTAAAGA
GTGAGGCCAAATtctggaaaatctgaccattttttccCTAAAAGGGAATA
ATATTTTCACTGTCAGGATTGATCTTTCGCCCAAGTTACTGTAATGTTCT
GACTTTAAAGACCTAATTTTAGGTTGCACATATAGAGGTTTTTAAATCAA
GTGCCCCTTCCCCGGGCTCTCATTGGTTTttgattcttctttttctcaGC
AATTTTTGGTTATGACAATACCGAGTCAAGATTACATGAAGATCTCACAA
AAGGTTACAACACTATCATTCGACCGGTAGAAAAGCCTGTAGATGCGATA
CAAGTCAAATTTGATATCGCCCTACAACAAATCATCGAAGTGGTAcgtta
atacacccctgtgtgtCGAGACAGGGATTTGTGCTAATTATTTCTCGTCT
TTTTTTTCTGGCTAACTATAGGAATTCAATTAGACTTGATTGTTTTTGTA
AATTCGGTATGACTCTATTTCCTAATTACATTCAACGGTCTTGTTTGCGC
CTGAATATCTAAGCTAGTTTTTTCCTTTTACTATACTCGGTGTTTGGTCA
ACCTTTTTAAACCCAGGGCTGTCGAATTCTTAACAATGTAGACATACGTT
GATTTTNTTCCTTTGATGTTTCTAATATACTCGGTGCTTGGTCAACCTTT
TTAAACCCAGGGCTGTCGAATTCTTAACAATGTAGACATAcgttaatttt
ctgatttttttggaaTGAAACTCAATTTCACGAAACCAGGAGTTGAATTT
GCGACCTGGGTATCCAGGCTGTGCAAGATTATGATATTTCAATTCATAAT
ATTTTACGGTAGGCAATACATTCTGCGTCAATATGGAATTTTAAAAGATG
TTTTCTTTGTCTATTTTACAGAATGAGAAAGAGGAATCTCTGGTGGTCAG
CGTCTTTTTACGGCAATATTGGACTGATGTTAAATTGAGATGGAATATGT
CCGAATACGGAAATATCGCTTCTACAAAATTCAGTCCCGGATCTGTATGG
GTACCGGATCTCATGTTGTATAATAAGTAAGCTTAGTTGTAAAAGTTACA
AAAGTCCTTAGGGCTGAAGTGAGGGGCCCAATATTGGAGCTAACTGACGT
TGCTCACCATGGGTTGGTAACGGAGAAAACATTTGAATTTCGAGGggtta
aaagtttttgaaaagagTTTATGGAAAAATAGTTGaacgttttcaaaaaa
gtctctttctcggcaaaaagtttatttttaaaagtctgtaagcgtcaact
gtaaatctccaaaaaaaattcccgaACCAAAATTTTATGCCGGCTCTTCT
AAATCTCGTTGTCATTACCCTgttttcgatttttcatttCAGTGCAGAGA
AATCAGACAATTTTGGTGGCGGTCTTGATCAGCTCAAGACTCGTGTTATT
GTCAATAATAAGGGACAAGTTTCTTGGTTAGCTCCAGCTATTATCACCGG
GGAATGCTCTATGAACATTAGGCATTTCCCTTTTGACACACAAATTTGTC
GATTGAAATTTGGTTCCTGGACTTATCATGGGGATGAAATTGATCTCCAA
CCTGCAAGAGATGAAAGAACATTTGATTTGGGTAGGTGTATACTAAATTT
GCACAAGAACTGCAATAAGTCATCTGCGGTATTGCGAATTCTCAAAGGTG
AAAGATATCTAAAACACAAAATAGTAATTGCTCCGTTCCTGACTGAGGCA
ATATAATGTGTCATCTTAATTAAATAATCAACAAAGACGATATATTATGT
TTCTTCCACCGGCGTAGAGTTACTGTATattcttggccctttttacgctg
gCCCTAATTTAACACCGGTCCccttaacgccggcccttattacgccacag
cctaattttgtgCTTACGTCAAGtagggccgttaataacgccaaaTTAGT
TTAGAAGTCTCAAAGGACCAGGCAAAGCTGGGGAAAGTTTTCCATAGCCT
TGAAGGGGGTAAGGTGATTTTGGCTTAGAAACCCTtgaaaagtagatttt
tgaAGTTCCTTATTGACGAAAACTGATGACTatctgatagagcatgaaaa
gtcatttgtctcatttggtCGACTAAGTTCCCCGGATATGGAtcatacgt
cttcaaaaatgtcaacttttatgctgacgtcagcatttatgagaaaatta
tttaacagaaaatatttactttcaaCAGACGCATCTTGAAGAGTactaaa
agtaattttttctgTCAAAAATTCATATGAAGCCTCGGGGGtggggggta
ctaggattgcGAGCTAACGGCGGTGAGCTGCCCGATTTTCGACCTTTGCA
TCCTTAGCGGGAGTAAAAAAGAGGAACAATTGGTaagttttgtgaatttt
acgacccttattgggactaatgtgaccaaattttgacgtttttggggaca
aaaaattaaaattttcctatttttttaaacCCTTAGTGGTCCTTTAGAGG
CCCAAAAAAGGTACCTTTatgggcggcacatacccgtccgtatcctccat
ttgcctaagcaCCCCCTCCCAGATTCGAAGTAATTCGGTGTACTTTTTCA
ATTTAAAGTTAGTGGCAAACAGCCGGTCTTCCTTTTCATGCTTCCGTTAA
TTACGTCAAGAATATCACAAATATATTTTAGGATCATACTCTGAGCATTC
AGAATGGACAATTGAAAACGCATACCTCAAACGAAACGTACTATACTACG
GATGCTGTCCTGAACCTTACCCTGATGTCACTGCTGAATTCACGTTGAAA
CGGAAACCTCTGTTTTACGTATTGAATCTATTGCTACCAATTATTTTTAT
TGGTGTTTTGACGCTTCTGGCTTTCTTTCTACCAGCTGAATCAGGTAGGT
GCATCGAATGTctaaaatgaaaacactttGGGCTAAGGCGTCAGCGTCTG
AAACCAGGGGCTCCTAGTTTAAATCCCCATTCTTTTTTACGTTTTACATT
ATAGTTCATATAGATAGCAGCACCGGCtagccgtggaccccgtgaaaaca
atccaAAGACTGTCTGAAAtttctagattactgggctatccacgtcaAAT
ATCGGCTCTTAGGAACGTTTTCGGCCAATCGAAAAATAATCAATgttcaa
atttatgaaattttcgtcatcttttAGGTGAACGAATCTCCTTTGCTGTC
ACTCTGATGTTAGCATTGACAGTTTTCATGTTGATAGTAGCTGACATGAT
TCCTGCTAATTCAGAAATAGTTCCAATGCTTGGAATATTCTTCACTTGTG
TTATGATTGAAATGGTCTTGATGGTATTCGCTATGTGTTATACACTGAAC
CTACATTTTAAAGAGCCAAATGCTGAAAACCGTATTGGAAAGTGGACACG
GGCTATAGTTTATAACCGGCTTGCGATTTATCTTGGAGTACGTAAACGGG
ATGAGGAATTCGCAAACGCCAATGGATGGAGCACGGCAAGAAAATACGCG
AACGGTAATGGGCCTTATGAAGAAGATGGATTTGAAGAcgttgctgcaaa
caaaaacgTAGTCCGTTTTACAGGGTTGAATCATAACGACAAGTCTGACT
TCGAAAAAGAAAGCACGTCAACGAAGCTGATGAAGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143 | supercontig | sc0000143:504287..508574 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| CHRNE | acetylcholine receptor subunit epsilon precursor | Homo Sapiens |
| CHRNA6 | neuronal acetylcholine receptor subunit alpha-6 isoform 1 precursor | Homo Sapiens |
| CHRNA1 | acetylcholine receptor subunit alpha isoform a precursor | Homo Sapiens |
| CHRNA3 | neuronal acetylcholine receptor subunit alpha-3 isoform 1 precursor | Homo Sapiens |
| CHRNA9 | neuronal acetylcholine receptor subunit alpha-9 precursor | Homo Sapiens |
| CHRNA10 | neuronal acetylcholine receptor subunit alpha-10 isoform a precursor | Homo Sapiens |
| CHRNB3 | neuronal acetylcholine receptor subunit beta-3 precursor | Homo Sapiens |
| CHRNB2 | neuronal acetylcholine receptor subunit beta-2 precursor | Homo Sapiens |
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