XLOC_007026 (gene) - C. hemisphaerica

Overview
NameXLOC_007026
Unique NameXLOC_007026
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000145:102999..114284+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007026 ID=XLOC_007026|Name=XLOC_007026|organism=Clytia hemisphaerica|type=gene|length=11286bp|location=Sequence derived from alignment at sc0000145:102999..114284+ (Clytia hemisphaerica)
ACCTTGCAATACTTGACGTGTACTCATCTTGAGCAATTCTTCAGGTTTAG CTGGGTTTCAGTGATAAGTTTACCAACAAATCTAGCAGCGTAGCTTTGCt ttcttgttgttttgatttgatcacaAAAACAAGATCACTCGTTGTTAGGA TCACGGCATCACATAGCTAcgttaaaaacaattttgcagACCATTAGTTC GGCTCTCCCTGGCCCTCTCGGTATTAACCAATCGACCTTTGATTCCGGTC TTGGTTTTCTTTGGTCCATGGTCATACTAGTCTCAGCTATAATGGTCACA CTTCCTATAATTCCAAAAAGATtctgaaatcgaaagcgaaagcATGTTcc attcaagatggcggcaaaaTTCGGATCAGTTTTTAGGGATGGCcttttta aaaatcaagttGCTGTTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCT ATTGCTTATGAGCTTGCAACACTAGGGTGCAATGTTGTTATAtcttcaag aaaaaaagaagtcatCGAGAAAAGCTCTAAAGAACTCAATGAAAGactga agaaagaaaaagtttttgccATACCATGTAACATCAGAAAAGAAGAAGAG GTATAAAAATCTTTCAACATGTGTAAAAGCCTAGTTATGCAGGATTAAGA AGGTCAAAACAATAAGAATCAATAAGATGACGTGAGTGTTccattaagtt cgatcaatggcaGTCAGTAGACAgtcctgcctaaatccgacccccaaATA Actactatgaaaaaaaattctatgtttacaaacgttccctctccaagttg aacaataaactaatgcaagaactcttgaaacaaaacatctaacaagatga ctataatgtcaagatgtctattaatgtgataaaaaagtatgatttgtaaa aataattacctctatattattctgaatccgttgctcatgtgtttaaaacg ttaacaattttgtaataaaaaattatattttgtataagaatcaattattg ttatttgattCAATATAGTTAAGCAtaatcaaatctctcagtttagacTT TAGACTTTGGTATCTGCATTGCGTCACTGCGaaaggtttctttttttttt tagtttgtatctttgacgaccctgcctatgccccggacagNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgtctggggcgtccggggtagtctctcaaaaacaaataa tacggaccccgggcacgcatcaaaaaaaccccggactgtccggggcatag gcagggtcgttatctttgaaagaccccgtcggatttaggctgggctgtcg gatttaggaccactcacggtaactCTTCGTACAAAAATtatgggaaacgc atatttggactttgtaccctatgctgcacgcaagcacttaagctagcggg acaaaaatcagtatTTTTAAGTTTGCataaaaaaaacgccacatagaaga tcaaATTCAGTatatatgtgaatagagcagtaaaaaatacaacttttcta tttttcctttttttttcaaaagttctaggaatgaaaataaagggataatg ataattgccCCCCCCCAGCAGTTAgtatgaatgcgtgaatgggcattttc ggttgcgtgattgcgtgaaacgagggtccgctggggggggcctctTTTAA GAGCCATTATCTGTAAGAACCAGGCATGTAtatcagttaggaacatttgg cgagttcctgtacgcggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt ttcgatggaaaatggtaagaaacttaagtttacaagtgtcatttagtttt tgctggcttatagaatggcaggatcctggatggtttccctaactgtatAT AGTGATAGtagaaacatttttaaattcgtccatttttggatatttggtaG ACAATAGTGAAAGACTCAGAACCCCAAAATTCCAGGTCCCCACTTTTTTT GGCCCTTTTCTTTGTTACAACTTTAAGAGGCATTTTTTCAAGTTGCAACT AAGATCAcatgattttttattaattttcttgaAGTACCCAATTAGTGCTT CCAAAAAAACCCATGTGACCTTAAACGCAAATTTAATAATGTCGGCTTAA AAACGCTCCAAAATCCATTTTCAGGTGCCCTTACTCAGCCCAGGACTTTT TGGGCCAAATTTCTCTGTGGAAATGTGTTGAGCAACTTTATAACAGCAga tttaagcaattttgaaaaaaaaatttaaagtagaCTGGGCTCTAGCAGCC CTGAAAGGGGGCTCCATACTCAAAAAGTAGCAAATCTGGCTCAAATTTTT CAGAGTTTCGACTAATTTCGGgcaaaaccaaaaattggatCTGATAGCCT AGACtatttattttcagaaagtgaaaTGAAACCAACCAATGTGATCTATA AGcatgaaagagaaaaaaaggatcaaaaattttggttgcttggcgtgttt ttatagaaaaactggccaaattcgatatttctttataaagacattatcaa ttacttaggtattagcttttctcgagattggctctttcattctttatgat tttttacacaaagatgcataactataaacccttgaatgtgacggagcccg attttcgaaacaaaaatttgggggcaaatttggaccaaaaaacggctgaa aaatgggttttttagactttgtgaaaaattggatcattaattttttctga ttttttgcatgaaagtagggtaccatcataggtaaaagatggctcaagca gatttttgcaaaaaaattttgttggctcaaaaaatgcatgtttatctata agaatcactattaataagcatacatcaatgttcttaaaattactaaatta tttgatgagatatgtttttttgctcacgaagtcttgaatatgaaagaata tttgaagATCATGatattttggtttctaaacgtttttttataagaaacaa acgactaattttaatagattgtcactatttgtgtgctgaatgattgttta atggtcacgctcacgtagatatcaattatatatgtgttaaaggcataacc aggtaggtccataaaagtatcacttgttataaATCCTATCTCTAGAAAGG GTGTTAGAATTACAGAAGGGATGTctacattagaccaacttacagtaatC TTATATGTTAAAAAACAGACCATGTCAGGGTATTATCTGGCACTATCAGT AAACATTGGAAAGCTGATAAATGTACAGGGAATGAGGATTTTGTCAAGGT GAGTACTGAGCAATTTTTTGCCATATGAAACATAAGAAATAGTCAAAGAA TCTTACCTGTATCAACTGCAATTTATAGCTAGCTAGTTGTGGGTGAGGGT TTCAAAGTTTGTAAATAtgaatggttgttttcttttcgcAAATTAAATCT tagtatcatttttaattttccccGAACTTGACCTCCTCGAAAATTAAGAA GTCACCTGCCCGGCAAATTATATGCTTGACAATAAATTACAGTAAAATGC CCATATtgcattggttagacgcaacatcTTTCCAAGAAGGCTTCTcttga ataaaaacatcaaaacagatCAATGCAAATTACAATGAAATACCCATACC GGTTATACGCAACTAATATTGACACTAGCATGTCCCCAGCGCttagtgac ttcaatgaatgtaatttaactgaaacatccattcaagaagtgtttctttt gaataaaaacaactAACAAAAGATCAATGAAAGTTACAGTGAAATGCCtg attggttagacgcaaccaatagcAATATCGACACTAGCATACCCttaagc ttagagtgacttcaattaatgtaatttaattgaaacatccTTTGAAGGAG TCtttcttttgaaggaaaataagtaGCCAATGATCAATGGAAATTACAAT GAAATacccatattggttagacgcaaccaatattgACACTTCCATATCCT CAAACTCAGAGtaactttaatgaatgtaatttaactgaaacgtcCTTCAA AGAAGCGCTTCTGAAAAACACCATTTGAgaagaaaaacgaaattttcaat tggggATATATTTCCTCTTctcatcttcattttccaagtgtcttttaatt ttttctttttgataactATCCATTCCTGATGGTCTTTTCAATGAACACAA AACTGCTCTATCTAATTCGAGttctatctatcaaaagttatagcaatTTT TACCTCCGATTCAACTTTTACTGAAACGACAtcttcaaagtttttgtttg tcaTACTAGTAATTAATTGTACTACTCCTTAAAATCTTTCTCGACCAATT AGATTCGTGTGATAATGTTAGGTTGACAATAAACAAATTATACAATGCAC ATTTTTTTAGTTACACATCTGATGATGCATAGTGCATGAAAACTCTTAAT ACTggaattttaacattttgtattggaataaattttgaaatataatacaa TGCACATGATAAACATAGGAAACTATCTTTTAGGTGTCTTCCTTGATGAA AGAAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTCAATAATGGAG GTGGCCAATTTATCTCACCATTTTCCATGATCAACAAAAAAGGATGGAGT GCCGTTATTGACACAAATCTAAACGGAACTTTCCATTGTTTGAAAGAAGG TATAACTCTCAGGTTCTTTTCGTTGTTGCTTGCGTGAATAGTTTGACCAC AACCCGACCTTAAAGTCCTCTTCAAAAACTCTAACATCTTGACTTTTGTC TTTTGTTATAATTATTCCAATTACATGGCCCAGTAAATAGTTTTATTGAC TGTCATTTAGAACATTGTGTATTGTATCAGTTCATGAAGTTTTACATTGT CTCTATTAATATTCCACAAGGATGtaatttgttaaatttcaagataattA TATCCGGCTTCACTGGGCTTCATGGTAGTTGAGTCGCTGATTTTATCATA ATTCAGCAAAATTGAGAGACATACTCATTTTCATGAAATAATTTATCCCC TTTcgagaaataaaaaaagctcTGTTTGCAGTGTATTGTagattttaatt caattttaatgTCAATTCCACCGTGTTGCCTGAAAATTACGGCAGCATGA AGCACCGTTTAGCAATTGTAAGGTAGTTCTCCCATTTCTCGAATTTTCTT GAGCAATTTGTGATTTTATCTATTTCTctgtatttttctcttttatagCT TACGATGCATGGATGGGGGAACATGGAGGATCAATTGTAAACATCACTGT TGATAATTTCAATGGAATGCCTTACATGTCGTAAGTAGCAGCAACTGGAT TCATCTTTCATGAATCAGTTAAAAAATTGACTCTGAATATAGCAAAATTA CTATGCCTTCaattccgaaaatttttttcatattttattttcattattaa tATAAAATAGATTAAGACAAATCGTTGGCGTTATCTCAAATTCATCCCCT TTAATTTAAGTCTTTTAATGGGATTGGTATTGTTAAAGGCTTACTTATGA TAACAGTTCTTTGACTTTATTTTGACTTAATTTCTTCAACcaataaacct tttcataagtcacgaacatcacttgcctcgttttgaaataaTTGCCAAGG taattaactcccagcggattttattaaaactactttctatgtttataaaa aaaatcatttaatgccTCAATGGACATAATCACCATCATGCATGGTAATT gcttgaatacgaggcaagtgatgttggtgacgtaatttatggaaAGGTCT ATTGCGATTGGAATTAAGAGTGATATGATCCTTTTTTGCAGGCACAGTGG AGCAGCAAGGGCAGGTGTAACCAATCTCACCAAAACATTAGCACTTGAAT GGGCTCCAAATAATATACGAATAAACTGTGTTGCTCCAGTAAGCTTCCTA GGATTTTTTTTGGCCCTAATTTATATTGTAAATCACATTGTTGGAAGTGA GTCTTGCAAACGCAGTCGGGGGCGACAAGAAGGCTCATCTTTCGATAGCT TTCTACCCGAAGGTAAAAGAGGACGTCACTATTTCTCCCTCGACTGTTTC ACTTAAATTAAGAATCGAAATTTGACCTTGAAAAACTTTCCGCACTATCT TTCTTGGTCCCGTTAGAAGTGGAATTTTATGAGGATTGTCAGTTGCATAT TGAGGCCCTTGAAGAAAATTATTGGTGAAATCAGGGTCTATCAGGGTcct tttttgcaataaaaagcATTTGCCTTGCAAACTTCTATTCTGGCAATGGT AGGTGCCATTAATGGTAGGTACCATTTAAAACACTCGTTTAATTGAACAG AAAGGCGGAATTTATGATTCCCTTTATATTTTGCTTAGACGCAGTtggtt tgctttgtttttgatagCTTGACGAATGAAAAACTCACTCCTTCGAATTC TGGATTCTAGAGCCCAGCGAATTCCTAGCAAGCCCAGTGCATTGATTAGC TTTGATATGCAGTTGAGGCGGCGATCCGAATTTTTAGACCGGTGAATTGT TATCTTTTCGTGCTCTAGACCGGCTCGCTTGACCAAAATAAGATGATTAT AAGacttttttgataacttttgaaatactcATCCAATCGATTTTTTTTGC CACCTGTTGgtattgtgtattttacagactggccCAAAATTGCCCTTTTT TCCTAAATAGCCCTCGGATAGCCCTAGTATTGTaaaatgctattgacttg aacgtggttatgctgaaagtgaggattttagataaaaaacggaccggtct gtaaaataccaaccgctCACGTgacaaagttgaaattttgcacactgcct tagatggtcaatatctatcactggtgaaaattgcaaggttttttgaaaaa gaatttccagTAGTTTCTGAATTCCGCCAGGAGGTAAACGTGTACTTTAC AGATAGGTctgcaaagtaccaaatactTATGGGAAAgtatttttctcttt aatttgACAAATCATCCTTTAGGAACatttcagtcaaatcgaacGAGTCG ATCAGTTTTAAATACATGATTTTGGTCGAGTTTataatctggtctgtaaa ataccaaccagaaAGGTGGCTGaaccaaaattttgtaaatcatctTCAAT TATCCATACCTACCAAAATTCCAAAACTTTAAGGtcatagcacttgtcaa tcttgagattttaagggGCCAccgagcccccccccccccccaagatgcTT CCCCTAGTATAAATTGGAGGATGCTCGAAGTGTTAATGACTCAAAATTAC ATGATTTAttccatttttgttttcagGGAGTAATCTATTCCGATACTGCA GCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGAAGTCAAAAAGTC CATTCCATTCAAAAGAACTGGAACTGTAGAGGAGGTATACCACCTATGAA TTAGATGTAGAAATTTAGATTTGTTTTTGGATCTGACCTCTAGTAATACA GCTATTTTTATTATCACACAGTTGGCAAATACACTCAAGGGACGAAATGT CGTTTAGGGCAATGtgttttattttgcttttttgtACATTTAAAAGCTAG AGTCAATATTTTACATGAATAGCCCAGTATTCTGGGACATCACTTCTTAC AGTTTTATGTGTATATATTAGTCATTTTGACCAAATCAatacaatatttt tgaaataggATGTCTAAAAGTGTAGCCTTAAAATAGTGCTCATGGCTCGG TCCGGTTGGGGCTCAAAGCCCTGGTATTTTGCTTTCATCTCTGTGTTACA CGGTTTTTACCTTCCACAATAATCAAAGATTTGGCACAATATTAATGTTA AAAAGCGTAGCGGTGAAATAGTGCTCCTAGCTCGGCCTGGTAGGATGTCC AAGTCCTAGCATTTTGCTTTCACCTATGTATATGTTTTCATCCCTTTCAT TTATCAGATCTCTGGCACAGTATGCTTTCTGCTATCACCTGCAGCTAGTT TCATTTCTGGCGATGTGTGGAAAATTGACGGAGCACAGAGTTTGAATGGA CACAATACCTTTGAATTGCCCAGTAAGTGTTACactaaagtctaattttc tttttgccaacTGTTCTACAATTGTTTGGGAGACTTAACACAGCTGGCAC AGAACATTATTACAACGTCTATCTGACGTCCCTAACGTTCatgtaacgtt agatgaacgttgaaacaacgttgtgtgccagcttggaaTGATGATCGACC CAGGAAACTAGAACACATTTCCCCGTTTCTCTTTATATATACTATTGATG CAAATACTGAAACCtaattgaaattttcttcaacaatACAACATCTCGCT AAAGATTATAAAAGGCGTTTCGATAGCTTGCTATGCCGTTGAATCGGCCA ATACTGTAAATTGCGCATTTCCCCCGTGGTTTCTCAAGTAATCCTGCTTG ACCCGGTCGCCCCTTTAGTTGCTGAGTATTAAGCAATAAGGCTTAAGTAC CTTGCATAAGTAGCTATTTGCGAGTCTTGAAGAACCCCGAACCCATAACC TGGCGCACCGTAGCAGAAAGTGCTACATTTGTGCTACAGTCGCTAAAATG TATGCAAAAAATAGATATAAGAGAGTTTATCTCGGCAAGCCTCGACACCA TAATACGGTTTTTACTNAAATGTATGCAAAAAATGGATATAAAAGAGTTT ATCTCGGCAAGCCTCGTCACCATAATACGGTTTTTACGGACCCTGCTCAT CCCGTATCCCACTTCGAGAAGACCTTGTAACTAATAGTGTATGTTGCTAC ACCATTCTCTGATGTCGTGATCCATATCTGTCAAGTTTTAGTGAGAAATG GTAGCAACTTCTTTATCAATGTTtttcaaataatgaaaaatatcaaaagg gGCAATTGCATCGACTTTTGGTCAACTTATTCTAAATGTGACCGGAAAAA ATAAAGGAAGTTGTTCATTTAAAATAAGTTCCTGTAAATTTGAGCCTGCG ATTAGGTTAACGGCGGGTTGACTGTACTGATAGGATATCCCGCCTTCGCG GTTAACAAAAGATACTCATACTGCAATCGCGGGATATCTTTGACTGTACT GAACAGTTACTAGAAGGTTTCGTTCTACAATCATCCTCTCATCTGTTTCT AGATAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGGATGGCTTCA AAtcgaaattataaaaatattttttgtatagaAATTTACTTTCATGGTAA ATAACGTGCATGCACTTTATAATAACATTCTAAATCTGGGATTAAAAAAA CACCATCCCTACTTTTAGGACCAGCTGTAATCTTTGGGACCAAGTCTTTC AAGTTTAGATCAGTATGTCTGAGCTtgcatttgaaaaaaagattttagct CTAGAAGTATCCATTTTGAAGATCTTTTCCCATCGTTGACCACCCATGCG TTTAGACGATTGTGACTTTTCCACTCAAACATTAGGCACCTGTTTATATG CTTAtagtttcaacgtttttcacGACTCTTAGAGAGATCCCTCTGCACAA AAAATTTTTAGTCCGAATTTAGATAATTTTCAGATTAAcccttttaattt ttctatatttCGGACCCCTTTTGGAGAATATTGAAACATGCATGCattaa gatattttttaaagaaattgtatattttaaaattgattaatatcattaat ttcaatcataaaaaaattaagaattgtACAAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012497TCONS_00012497Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012497-proteinTCONS_00012497-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:102999..114284 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PECRperoxisomal trans-2-enoyl-CoA reductase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.66 58.34 53.85 51.69 22.63 18.74 13.49 14.3 20.2 17.42 15.49 19.39 13.64 13.23 18.85 22.52 16.6 16.22 8.17 10.99 11.53 11.09 18.63 17.24 12.26 13.68 9.37 6.27 13.12 11.55