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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012497 ID=TCONS_00012497|Name=TCONS_00012497|organism=Clytia hemisphaerica|type=transcript|length=1752bp
ACCTTGCAATACTTGACGTGTACTCATCTTGAGCAATTCTTCAGGTTTAG
CTGGGTTTCAGTGATAAGTTTACCAACAAATCTAGCAGCGTAGCTTTGCt
ttcttgttgttttgatttgatcacaAAAACAAGATCACTCGTTGTTAGGA
TCACGGCATCACATAGCTAcgttaaaaacaattttgcagACCATTAGTTC
GGCTCTCCCTGGCCCTCTCGGTATTAACCAATCGACCTTTGATTCCGGTC
TTGGTTTTCTTTGGTCCATGGTCATACTAGTCTCAGCTATAATGGTCACA
CTTCCTATAATTCCAAAAAGATtctgaaatcgaaagcgaaagcATGTTcc
attcaagatggcggcaaaaTTCGGATCAGTTTTTAGGGATGGCcttttta
aaaatcaagttGCTGTTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCT
ATTGCTTATGAGCTTGCAACACTAGGGTGCAATGTTGTTATAtcttcaag
aaaaaaagaagtcatCGAGAAAAGCTCTAAAGAACTCAATGAAAGactga
agaaagaaaaagtttttgccATACCATGTAACATCAGAAAAGAAGAAGAG
GTGTCTTCCTTGATGAAAGAAACAGTATCGAAGTTTGGTCAACTCAACTA
CCTTGTCAATAATGGAGGTGGCCAATTTATCTCACCATTTTCCATGATCA
ACAAAAAAGGATGGAGTGCCGTTATTGACACAAATCTAAACGGAACTTTC
CATTGTTTGAAAGAAGCTTACGATGCATGGATGGGGGAACATGGAGGATC
AATTGTAAACATCACTGTTGATAATTTCAATGGAATGCCTTACATGTCGC
ACAGTGGAGCAGCAAGGGCAGGTGTAACCAATCTCACCAAAACATTAGCA
CTTGAATGGGCTCCAAATAATATACGAATAAACTGTGTTGCTCCAGGAGT
AATCTATTCCGATACTGCAGCTGCGAATTATAAAGACCATCCAACACTCT
TTGAAGAAGTCAAAAAGTCCATTCCATTCAAAAGAACTGGAACTGTAGAG
GAGATCTCTGGCACAGTATGCTTTCTGCTATCACCTGCAGCTAGTTTCAT
TTCTGGCGATGTGTGGAAAATTGACGGAGCACAGAGTTTGAATGGACACA
ATACCTTTGAATTGCCCAATAATTATAAAACGAAGGAATATTCGTGGCAG
GATTTGGATGGCTTCAAAtcgaaattataaaaatattttttgtatagaAA
TTTACTTTCATGGTAAATAACGTGCATGCACTTTATAATAACATTCTAAA
TCTGGGATTAAAAAAACACCATCCCTACTTTTAGGACCAGCTGTAATCTT
TGGGACCAAGTCTTTCAAGTTTAGATCAGTATGTCTGAGCTtgcatttga
aaaaaagattttagctCTAGAAGTATCCATTTTGAAGATCTTTTCCCATC
GTTGACCACCCATGCGTTTAGACGATTGTGACTTTTCCACTCAAACATTA
GGCACCTGTTTATATGCTTAtagtttcaacgtttttcacGACTCTTAGAG
AGATCCCTCTGCACAAAAAATTTTTAGTCCGAATTTAGATAATTTTCAGA
TTAAcccttttaatttttctatatttCGGACCCCTTTTGGAGAATATTGA
AACATGCATGCattaagatattttttaaagaaattgtatattttaaaatt
gattaatatcattaatttcaatcataaaaaaattaagaattgtACAAAAA
AT Run BLAST on NCBI protein sequence of TCONS_00012497-protein >TCONS_00012497-protein ID=TCONS_00012497-protein|Name=TCONS_00012497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MAAKFGSVFRDGLFKNQVAVVTGGGTGIGKAIAYELATLGCNVVISSRKK
EVIEKSSKELNERLKKEKVFAIPCNIRKEEEVSSLMKETVSKFGQLNYLV
NNGGGQFISPFSMINKKGWSAVIDTNLNGTFHCLKEAYDAWMGEHGGSIV
NITVDNFNGMPYMSHSGAARAGVTNLTKTLALEWAPNNIRINCVAPGVIY
SDTAAANYKDHPTLFEEVKKSIPFKRTGTVEEISGTVCFLLSPAASFISG
DVWKIDGAQSLNGHNTFELPNNYKTKEYSWQDLDGFKSKL Run BLAST on NCBI transcript from alignment at sc0000145:102999..114284+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012497 ID=TCONS_00012497|Name=TCONS_00012497|organism=Clytia hemisphaerica|type=transcript|length=11286bp|location=Sequence derived from alignment at sc0000145:102999..114284+ (Clytia hemisphaerica)
ACCTTGCAATACTTGACGTGTACTCATCTTGAGCAATTCTTCAGGTTTAG
CTGGGTTTCAGTGATAAGTTTACCAACAAATCTAGCAGCGTAGCTTTGCt
ttcttgttgttttgatttgatcacaAAAACAAGATCACTCGTTGTTAGGA
TCACGGCATCACATAGCTAcgttaaaaacaattttgcagACCATTAGTTC
GGCTCTCCCTGGCCCTCTCGGTATTAACCAATCGACCTTTGATTCCGGTC
TTGGTTTTCTTTGGTCCATGGTCATACTAGTCTCAGCTATAATGGTCACA
CTTCCTATAATTCCAAAAAGATtctgaaatcgaaagcgaaagcATGTTcc
attcaagatggcggcaaaaTTCGGATCAGTTTTTAGGGATGGCcttttta
aaaatcaagttGCTGTTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCT
ATTGCTTATGAGCTTGCAACACTAGGGTGCAATGTTGTTATAtcttcaag
aaaaaaagaagtcatCGAGAAAAGCTCTAAAGAACTCAATGAAAGactga
agaaagaaaaagtttttgccATACCATGTAACATCAGAAAAGAAGAAGAG
GTATAAAAATCTTTCAACATGTGTAAAAGCCTAGTTATGCAGGATTAAGA
AGGTCAAAACAATAAGAATCAATAAGATGACGTGAGTGTTccattaagtt
cgatcaatggcaGTCAGTAGACAgtcctgcctaaatccgacccccaaATA
Actactatgaaaaaaaattctatgtttacaaacgttccctctccaagttg
aacaataaactaatgcaagaactcttgaaacaaaacatctaacaagatga
ctataatgtcaagatgtctattaatgtgataaaaaagtatgatttgtaaa
aataattacctctatattattctgaatccgttgctcatgtgtttaaaacg
ttaacaattttgtaataaaaaattatattttgtataagaatcaattattg
ttatttgattCAATATAGTTAAGCAtaatcaaatctctcagtttagacTT
TAGACTTTGGTATCTGCATTGCGTCACTGCGaaaggtttctttttttttt
tagtttgtatctttgacgaccctgcctatgccccggacagNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNgtctggggcgtccggggtagtctctcaaaaacaaataa
tacggaccccgggcacgcatcaaaaaaaccccggactgtccggggcatag
gcagggtcgttatctttgaaagaccccgtcggatttaggctgggctgtcg
gatttaggaccactcacggtaactCTTCGTACAAAAATtatgggaaacgc
atatttggactttgtaccctatgctgcacgcaagcacttaagctagcggg
acaaaaatcagtatTTTTAAGTTTGCataaaaaaaacgccacatagaaga
tcaaATTCAGTatatatgtgaatagagcagtaaaaaatacaacttttcta
tttttcctttttttttcaaaagttctaggaatgaaaataaagggataatg
ataattgccCCCCCCCAGCAGTTAgtatgaatgcgtgaatgggcattttc
ggttgcgtgattgcgtgaaacgagggtccgctggggggggcctctTTTAA
GAGCCATTATCTGTAAGAACCAGGCATGTAtatcagttaggaacatttgg
cgagttcctgtacgcggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
ttcgatggaaaatggtaagaaacttaagtttacaagtgtcatttagtttt
tgctggcttatagaatggcaggatcctggatggtttccctaactgtatAT
AGTGATAGtagaaacatttttaaattcgtccatttttggatatttggtaG
ACAATAGTGAAAGACTCAGAACCCCAAAATTCCAGGTCCCCACTTTTTTT
GGCCCTTTTCTTTGTTACAACTTTAAGAGGCATTTTTTCAAGTTGCAACT
AAGATCAcatgattttttattaattttcttgaAGTACCCAATTAGTGCTT
CCAAAAAAACCCATGTGACCTTAAACGCAAATTTAATAATGTCGGCTTAA
AAACGCTCCAAAATCCATTTTCAGGTGCCCTTACTCAGCCCAGGACTTTT
TGGGCCAAATTTCTCTGTGGAAATGTGTTGAGCAACTTTATAACAGCAga
tttaagcaattttgaaaaaaaaatttaaagtagaCTGGGCTCTAGCAGCC
CTGAAAGGGGGCTCCATACTCAAAAAGTAGCAAATCTGGCTCAAATTTTT
CAGAGTTTCGACTAATTTCGGgcaaaaccaaaaattggatCTGATAGCCT
AGACtatttattttcagaaagtgaaaTGAAACCAACCAATGTGATCTATA
AGcatgaaagagaaaaaaaggatcaaaaattttggttgcttggcgtgttt
ttatagaaaaactggccaaattcgatatttctttataaagacattatcaa
ttacttaggtattagcttttctcgagattggctctttcattctttatgat
tttttacacaaagatgcataactataaacccttgaatgtgacggagcccg
attttcgaaacaaaaatttgggggcaaatttggaccaaaaaacggctgaa
aaatgggttttttagactttgtgaaaaattggatcattaattttttctga
ttttttgcatgaaagtagggtaccatcataggtaaaagatggctcaagca
gatttttgcaaaaaaattttgttggctcaaaaaatgcatgtttatctata
agaatcactattaataagcatacatcaatgttcttaaaattactaaatta
tttgatgagatatgtttttttgctcacgaagtcttgaatatgaaagaata
tttgaagATCATGatattttggtttctaaacgtttttttataagaaacaa
acgactaattttaatagattgtcactatttgtgtgctgaatgattgttta
atggtcacgctcacgtagatatcaattatatatgtgttaaaggcataacc
aggtaggtccataaaagtatcacttgttataaATCCTATCTCTAGAAAGG
GTGTTAGAATTACAGAAGGGATGTctacattagaccaacttacagtaatC
TTATATGTTAAAAAACAGACCATGTCAGGGTATTATCTGGCACTATCAGT
AAACATTGGAAAGCTGATAAATGTACAGGGAATGAGGATTTTGTCAAGGT
GAGTACTGAGCAATTTTTTGCCATATGAAACATAAGAAATAGTCAAAGAA
TCTTACCTGTATCAACTGCAATTTATAGCTAGCTAGTTGTGGGTGAGGGT
TTCAAAGTTTGTAAATAtgaatggttgttttcttttcgcAAATTAAATCT
tagtatcatttttaattttccccGAACTTGACCTCCTCGAAAATTAAGAA
GTCACCTGCCCGGCAAATTATATGCTTGACAATAAATTACAGTAAAATGC
CCATATtgcattggttagacgcaacatcTTTCCAAGAAGGCTTCTcttga
ataaaaacatcaaaacagatCAATGCAAATTACAATGAAATACCCATACC
GGTTATACGCAACTAATATTGACACTAGCATGTCCCCAGCGCttagtgac
ttcaatgaatgtaatttaactgaaacatccattcaagaagtgtttctttt
gaataaaaacaactAACAAAAGATCAATGAAAGTTACAGTGAAATGCCtg
attggttagacgcaaccaatagcAATATCGACACTAGCATACCCttaagc
ttagagtgacttcaattaatgtaatttaattgaaacatccTTTGAAGGAG
TCtttcttttgaaggaaaataagtaGCCAATGATCAATGGAAATTACAAT
GAAATacccatattggttagacgcaaccaatattgACACTTCCATATCCT
CAAACTCAGAGtaactttaatgaatgtaatttaactgaaacgtcCTTCAA
AGAAGCGCTTCTGAAAAACACCATTTGAgaagaaaaacgaaattttcaat
tggggATATATTTCCTCTTctcatcttcattttccaagtgtcttttaatt
ttttctttttgataactATCCATTCCTGATGGTCTTTTCAATGAACACAA
AACTGCTCTATCTAATTCGAGttctatctatcaaaagttatagcaatTTT
TACCTCCGATTCAACTTTTACTGAAACGACAtcttcaaagtttttgtttg
tcaTACTAGTAATTAATTGTACTACTCCTTAAAATCTTTCTCGACCAATT
AGATTCGTGTGATAATGTTAGGTTGACAATAAACAAATTATACAATGCAC
ATTTTTTTAGTTACACATCTGATGATGCATAGTGCATGAAAACTCTTAAT
ACTggaattttaacattttgtattggaataaattttgaaatataatacaa
TGCACATGATAAACATAGGAAACTATCTTTTAGGTGTCTTCCTTGATGAA
AGAAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTCAATAATGGAG
GTGGCCAATTTATCTCACCATTTTCCATGATCAACAAAAAAGGATGGAGT
GCCGTTATTGACACAAATCTAAACGGAACTTTCCATTGTTTGAAAGAAGG
TATAACTCTCAGGTTCTTTTCGTTGTTGCTTGCGTGAATAGTTTGACCAC
AACCCGACCTTAAAGTCCTCTTCAAAAACTCTAACATCTTGACTTTTGTC
TTTTGTTATAATTATTCCAATTACATGGCCCAGTAAATAGTTTTATTGAC
TGTCATTTAGAACATTGTGTATTGTATCAGTTCATGAAGTTTTACATTGT
CTCTATTAATATTCCACAAGGATGtaatttgttaaatttcaagataattA
TATCCGGCTTCACTGGGCTTCATGGTAGTTGAGTCGCTGATTTTATCATA
ATTCAGCAAAATTGAGAGACATACTCATTTTCATGAAATAATTTATCCCC
TTTcgagaaataaaaaaagctcTGTTTGCAGTGTATTGTagattttaatt
caattttaatgTCAATTCCACCGTGTTGCCTGAAAATTACGGCAGCATGA
AGCACCGTTTAGCAATTGTAAGGTAGTTCTCCCATTTCTCGAATTTTCTT
GAGCAATTTGTGATTTTATCTATTTCTctgtatttttctcttttatagCT
TACGATGCATGGATGGGGGAACATGGAGGATCAATTGTAAACATCACTGT
TGATAATTTCAATGGAATGCCTTACATGTCGTAAGTAGCAGCAACTGGAT
TCATCTTTCATGAATCAGTTAAAAAATTGACTCTGAATATAGCAAAATTA
CTATGCCTTCaattccgaaaatttttttcatattttattttcattattaa
tATAAAATAGATTAAGACAAATCGTTGGCGTTATCTCAAATTCATCCCCT
TTAATTTAAGTCTTTTAATGGGATTGGTATTGTTAAAGGCTTACTTATGA
TAACAGTTCTTTGACTTTATTTTGACTTAATTTCTTCAACcaataaacct
tttcataagtcacgaacatcacttgcctcgttttgaaataaTTGCCAAGG
taattaactcccagcggattttattaaaactactttctatgtttataaaa
aaaatcatttaatgccTCAATGGACATAATCACCATCATGCATGGTAATT
gcttgaatacgaggcaagtgatgttggtgacgtaatttatggaaAGGTCT
ATTGCGATTGGAATTAAGAGTGATATGATCCTTTTTTGCAGGCACAGTGG
AGCAGCAAGGGCAGGTGTAACCAATCTCACCAAAACATTAGCACTTGAAT
GGGCTCCAAATAATATACGAATAAACTGTGTTGCTCCAGTAAGCTTCCTA
GGATTTTTTTTGGCCCTAATTTATATTGTAAATCACATTGTTGGAAGTGA
GTCTTGCAAACGCAGTCGGGGGCGACAAGAAGGCTCATCTTTCGATAGCT
TTCTACCCGAAGGTAAAAGAGGACGTCACTATTTCTCCCTCGACTGTTTC
ACTTAAATTAAGAATCGAAATTTGACCTTGAAAAACTTTCCGCACTATCT
TTCTTGGTCCCGTTAGAAGTGGAATTTTATGAGGATTGTCAGTTGCATAT
TGAGGCCCTTGAAGAAAATTATTGGTGAAATCAGGGTCTATCAGGGTcct
tttttgcaataaaaagcATTTGCCTTGCAAACTTCTATTCTGGCAATGGT
AGGTGCCATTAATGGTAGGTACCATTTAAAACACTCGTTTAATTGAACAG
AAAGGCGGAATTTATGATTCCCTTTATATTTTGCTTAGACGCAGTtggtt
tgctttgtttttgatagCTTGACGAATGAAAAACTCACTCCTTCGAATTC
TGGATTCTAGAGCCCAGCGAATTCCTAGCAAGCCCAGTGCATTGATTAGC
TTTGATATGCAGTTGAGGCGGCGATCCGAATTTTTAGACCGGTGAATTGT
TATCTTTTCGTGCTCTAGACCGGCTCGCTTGACCAAAATAAGATGATTAT
AAGacttttttgataacttttgaaatactcATCCAATCGATTTTTTTTGC
CACCTGTTGgtattgtgtattttacagactggccCAAAATTGCCCTTTTT
TCCTAAATAGCCCTCGGATAGCCCTAGTATTGTaaaatgctattgacttg
aacgtggttatgctgaaagtgaggattttagataaaaaacggaccggtct
gtaaaataccaaccgctCACGTgacaaagttgaaattttgcacactgcct
tagatggtcaatatctatcactggtgaaaattgcaaggttttttgaaaaa
gaatttccagTAGTTTCTGAATTCCGCCAGGAGGTAAACGTGTACTTTAC
AGATAGGTctgcaaagtaccaaatactTATGGGAAAgtatttttctcttt
aatttgACAAATCATCCTTTAGGAACatttcagtcaaatcgaacGAGTCG
ATCAGTTTTAAATACATGATTTTGGTCGAGTTTataatctggtctgtaaa
ataccaaccagaaAGGTGGCTGaaccaaaattttgtaaatcatctTCAAT
TATCCATACCTACCAAAATTCCAAAACTTTAAGGtcatagcacttgtcaa
tcttgagattttaagggGCCAccgagcccccccccccccccaagatgcTT
CCCCTAGTATAAATTGGAGGATGCTCGAAGTGTTAATGACTCAAAATTAC
ATGATTTAttccatttttgttttcagGGAGTAATCTATTCCGATACTGCA
GCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGAAGTCAAAAAGTC
CATTCCATTCAAAAGAACTGGAACTGTAGAGGAGGTATACCACCTATGAA
TTAGATGTAGAAATTTAGATTTGTTTTTGGATCTGACCTCTAGTAATACA
GCTATTTTTATTATCACACAGTTGGCAAATACACTCAAGGGACGAAATGT
CGTTTAGGGCAATGtgttttattttgcttttttgtACATTTAAAAGCTAG
AGTCAATATTTTACATGAATAGCCCAGTATTCTGGGACATCACTTCTTAC
AGTTTTATGTGTATATATTAGTCATTTTGACCAAATCAatacaatatttt
tgaaataggATGTCTAAAAGTGTAGCCTTAAAATAGTGCTCATGGCTCGG
TCCGGTTGGGGCTCAAAGCCCTGGTATTTTGCTTTCATCTCTGTGTTACA
CGGTTTTTACCTTCCACAATAATCAAAGATTTGGCACAATATTAATGTTA
AAAAGCGTAGCGGTGAAATAGTGCTCCTAGCTCGGCCTGGTAGGATGTCC
AAGTCCTAGCATTTTGCTTTCACCTATGTATATGTTTTCATCCCTTTCAT
TTATCAGATCTCTGGCACAGTATGCTTTCTGCTATCACCTGCAGCTAGTT
TCATTTCTGGCGATGTGTGGAAAATTGACGGAGCACAGAGTTTGAATGGA
CACAATACCTTTGAATTGCCCAGTAAGTGTTACactaaagtctaattttc
tttttgccaacTGTTCTACAATTGTTTGGGAGACTTAACACAGCTGGCAC
AGAACATTATTACAACGTCTATCTGACGTCCCTAACGTTCatgtaacgtt
agatgaacgttgaaacaacgttgtgtgccagcttggaaTGATGATCGACC
CAGGAAACTAGAACACATTTCCCCGTTTCTCTTTATATATACTATTGATG
CAAATACTGAAACCtaattgaaattttcttcaacaatACAACATCTCGCT
AAAGATTATAAAAGGCGTTTCGATAGCTTGCTATGCCGTTGAATCGGCCA
ATACTGTAAATTGCGCATTTCCCCCGTGGTTTCTCAAGTAATCCTGCTTG
ACCCGGTCGCCCCTTTAGTTGCTGAGTATTAAGCAATAAGGCTTAAGTAC
CTTGCATAAGTAGCTATTTGCGAGTCTTGAAGAACCCCGAACCCATAACC
TGGCGCACCGTAGCAGAAAGTGCTACATTTGTGCTACAGTCGCTAAAATG
TATGCAAAAAATAGATATAAGAGAGTTTATCTCGGCAAGCCTCGACACCA
TAATACGGTTTTTACTNAAATGTATGCAAAAAATGGATATAAAAGAGTTT
ATCTCGGCAAGCCTCGTCACCATAATACGGTTTTTACGGACCCTGCTCAT
CCCGTATCCCACTTCGAGAAGACCTTGTAACTAATAGTGTATGTTGCTAC
ACCATTCTCTGATGTCGTGATCCATATCTGTCAAGTTTTAGTGAGAAATG
GTAGCAACTTCTTTATCAATGTTtttcaaataatgaaaaatatcaaaagg
gGCAATTGCATCGACTTTTGGTCAACTTATTCTAAATGTGACCGGAAAAA
ATAAAGGAAGTTGTTCATTTAAAATAAGTTCCTGTAAATTTGAGCCTGCG
ATTAGGTTAACGGCGGGTTGACTGTACTGATAGGATATCCCGCCTTCGCG
GTTAACAAAAGATACTCATACTGCAATCGCGGGATATCTTTGACTGTACT
GAACAGTTACTAGAAGGTTTCGTTCTACAATCATCCTCTCATCTGTTTCT
AGATAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGGATGGCTTCA
AAtcgaaattataaaaatattttttgtatagaAATTTACTTTCATGGTAA
ATAACGTGCATGCACTTTATAATAACATTCTAAATCTGGGATTAAAAAAA
CACCATCCCTACTTTTAGGACCAGCTGTAATCTTTGGGACCAAGTCTTTC
AAGTTTAGATCAGTATGTCTGAGCTtgcatttgaaaaaaagattttagct
CTAGAAGTATCCATTTTGAAGATCTTTTCCCATCGTTGACCACCCATGCG
TTTAGACGATTGTGACTTTTCCACTCAAACATTAGGCACCTGTTTATATG
CTTAtagtttcaacgtttttcacGACTCTTAGAGAGATCCCTCTGCACAA
AAAATTTTTAGTCCGAATTTAGATAATTTTCAGATTAAcccttttaattt
ttctatatttCGGACCCCTTTTGGAGAATATTGAAACATGCATGCattaa
gatattttttaaagaaattgtatattttaaaattgattaatatcattaat
ttcaatcataaaaaaattaagaattgtACAAAAAAT Coding sequence (CDS) from alignment at sc0000145:102999..114284+ >TCONS_00012497 ID=TCONS_00012497|Name=TCONS_00012497|organism=Clytia hemisphaerica|type=CDS|length=6111bp|location=Sequence derived from alignment at sc0000145:102999..114284+ (Clytia hemisphaerica)
atggcggcaaaaTTCGGATCAGTTTTTAGGGATGGCctttttaaaaatca
agttGCTGTTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCTATTGCTT
ATGAGCTTGCAACACTAGGGTGCAATGTTGTTATAtcttcaagaaaaaaa
gaagtcatCGAGAAAAGCTCTAAAGAACTCAATGAAAGactgaagaaaga
aaaagtttttgccATACCATGTAACATCAGAAAAGAAGAAGAGGTGTCTT
CCTTGATGAAAGAAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTC
AATAATGGAGGTGGCCAATTTATCTCACCATTTTCCATGATCAACAAAAA
AGGATGGAGTGCCGTTATTGACACAAATCTAAACGGAACTTTCCATTGTT
TGAAAGAAGCTTACGATGCATGGATGGGGGAACATGGAGGATCAATTGTA
AACATCACTGTTGATAATTTCAATGGAATGCCTTACATGTCGCACAGTGG
AGCAGCAAGGGCAGGTGTAACCAATCTCACCAAAACATTAGCACTTGAAT
GGGCTCCAAATAATATACGAATAAACTGTGTTGCTCCAGGAGTAATCTAT
TCCGATACTGCAGCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGA
AGTCAAAAAGTCCATTCCATTCAAAAGAACTGGAACTGTAGAGGAGATCT
CTGGCACAGTATGCTTTCTGCTATCACCTGCAGCTAGTTTCATTTCTGGC
GATGTGTGGAAAATTGACGGAGCACAGAGTTTGAATGGACACAATACCTT
TGAATTGCCCAATAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGG
ATGGCTTCAAAtcgaaattataaatggcggcaaaaTTCGGATCAGTTTTT
AGGGATGGCctttttaaaaatcaagttGCTGTTGTCACAGGAGGTGGAAC
TGGAATTGGAAAAGCTATTGCTTATGAGCTTGCAACACTAGGGTGCAATG
TTGTTATAtcttcaagaaaaaaagaagtcatCGAGAAAAGCTCTAAAGAA
CTCAATGAAAGactgaagaaagaaaaagtttttgccATACCATGTAACAT
CAGAAAAGAAGAAGAGGTGTCTTCCTTGATGAAAGAAACAGTATCGAAGT
TTGGTCAACTCAACTACCTTGTCAATAATGGAGGTGGCCAATTTATCTCA
CCATTTTCCATGATCAACAAAAAAGGATGGAGTGCCGTTATTGACACAAA
TCTAAACGGAACTTTCCATTGTTTGAAAGAAGCTTACGATGCATGGATGG
GGGAACATGGAGGATCAATTGTAAACATCACTGTTGATAATTTCAATGGA
ATGCCTTACATGTCGCACAGTGGAGCAGCAAGGGCAGGTGTAACCAATCT
CACCAAAACATTAGCACTTGAATGGGCTCCAAATAATATACGAATAAACT
GTGTTGCTCCAGGAGTAATCTATTCCGATACTGCAGCTGCGAATTATAAA
GACCATCCAACACTCTTTGAAGAAGTCAAAAAGTCCATTCCATTCAAAAG
AACTGGAACTGTAGAGGAGATCTCTGGCACAGTATGCTTTCTGCTATCAC
CTGCAGCTAGTTTCATTTCTGGCGATGTGTGGAAAATTGACGGAGCACAG
AGTTTGAATGGACACAATACCTTTGAATTGCCCAATAATTATAAAACGAA
GGAATATTCGTGGCAGGATTTGGATGGCTTCAAAtcgaaattataaatgg
cggcaaaaTTCGGATCAGTTTTTAGGGATGGCctttttaaaaatcaagtt
GCTGTTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCTATTGCTTATGA
GCTTGCAACACTAGGGTGCAATGTTGTTATAtcttcaagaaaaaaagaag
tcatCGAGAAAAGCTCTAAAGAACTCAATGAAAGactgaagaaagaaaaa
gtttttgccATACCATGTAACATCAGAAAAGAAGAAGAGGTGTCTTCCTT
GATGAAAGAAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTCAATA
ATGGAGGTGGCCAATTTATCTCACCATTTTCCATGATCAACAAAAAAGGA
TGGAGTGCCGTTATTGACACAAATCTAAACGGAACTTTCCATTGTTTGAA
AGAAGCTTACGATGCATGGATGGGGGAACATGGAGGATCAATTGTAAACA
TCACTGTTGATAATTTCAATGGAATGCCTTACATGTCGCACAGTGGAGCA
GCAAGGGCAGGTGTAACCAATCTCACCAAAACATTAGCACTTGAATGGGC
TCCAAATAATATACGAATAAACTGTGTTGCTCCAGGAGTAATCTATTCCG
ATACTGCAGCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGAAGTC
AAAAAGTCCATTCCATTCAAAAGAACTGGAACTGTAGAGGAGATCTCTGG
CACAGTATGCTTTCTGCTATCACCTGCAGCTAGTTTCATTTCTGGCGATG
TGTGGAAAATTGACGGAGCACAGAGTTTGAATGGACACAATACCTTTGAA
TTGCCCAATAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGGATGG
CTTCAAAtcgaaattataaatggcggcaaaaTTCGGATCAGTTTTTAGGG
ATGGCctttttaaaaatcaagttGCTGTTGTCACAGGAGGTGGAACTGGA
ATTGGAAAAGCTATTGCTTATGAGCTTGCAACACTAGGGTGCAATGTTGT
TATAtcttcaagaaaaaaagaagtcatCGAGAAAAGCTCTAAAGAACTCA
ATGAAAGactgaagaaagaaaaagtttttgccATACCATGTAACATCAGA
AAAGAAGAAGAGGTGTCTTCCTTGATGAAAGAAACAGTATCGAAGTTTGG
TCAACTCAACTACCTTGTCAATAATGGAGGTGGCCAATTTATCTCACCAT
TTTCCATGATCAACAAAAAAGGATGGAGTGCCGTTATTGACACAAATCTA
AACGGAACTTTCCATTGTTTGAAAGAAGCTTACGATGCATGGATGGGGGA
ACATGGAGGATCAATTGTAAACATCACTGTTGATAATTTCAATGGAATGC
CTTACATGTCGCACAGTGGAGCAGCAAGGGCAGGTGTAACCAATCTCACC
AAAACATTAGCACTTGAATGGGCTCCAAATAATATACGAATAAACTGTGT
TGCTCCAGGAGTAATCTATTCCGATACTGCAGCTGCGAATTATAAAGACC
ATCCAACACTCTTTGAAGAAGTCAAAAAGTCCATTCCATTCAAAAGAACT
GGAACTGTAGAGGAGATCTCTGGCACAGTATGCTTTCTGCTATCACCTGC
AGCTAGTTTCATTTCTGGCGATGTGTGGAAAATTGACGGAGCACAGAGTT
TGAATGGACACAATACCTTTGAATTGCCCAATAATTATAAAACGAAGGAA
TATTCGTGGCAGGATTTGGATGGCTTCAAAtcgaaattataaatggcggc
aaaaTTCGGATCAGTTTTTAGGGATGGCctttttaaaaatcaagttGCTG
TTGTCACAGGAGGTGGAACTGGAATTGGAAAAGCTATTGCTTATGAGCTT
GCAACACTAGGGTGCAATGTTGTTATAtcttcaagaaaaaaagaagtcat
CGAGAAAAGCTCTAAAGAACTCAATGAAAGactgaagaaagaaaaagttt
ttgccATACCATGTAACATCAGAAAAGAAGAAGAGGTGTCTTCCTTGATG
AAAGAAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTCAATAATGG
AGGTGGCCAATTTATCTCACCATTTTCCATGATCAACAAAAAAGGATGGA
GTGCCGTTATTGACACAAATCTAAACGGAACTTTCCATTGTTTGAAAGAA
GCTTACGATGCATGGATGGGGGAACATGGAGGATCAATTGTAAACATCAC
TGTTGATAATTTCAATGGAATGCCTTACATGTCGCACAGTGGAGCAGCAA
GGGCAGGTGTAACCAATCTCACCAAAACATTAGCACTTGAATGGGCTCCA
AATAATATACGAATAAACTGTGTTGCTCCAGGAGTAATCTATTCCGATAC
TGCAGCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGAAGTCAAAA
AGTCCATTCCATTCAAAAGAACTGGAACTGTAGAGGAGATCTCTGGCACA
GTATGCTTTCTGCTATCACCTGCAGCTAGTTTCATTTCTGGCGATGTGTG
GAAAATTGACGGAGCACAGAGTTTGAATGGACACAATACCTTTGAATTGC
CCAATAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGGATGGCTTC
AAAtcgaaattataaatggcggcaaaaTTCGGATCAGTTTTTAGGGATGG
CctttttaaaaatcaagttGCTGTTGTCACAGGAGGTGGAACTGGAATTG
GAAAAGCTATTGCTTATGAGCTTGCAACACTAGGGTGCAATGTTGTTATA
tcttcaagaaaaaaagaagtcatCGAGAAAAGCTCTAAAGAACTCAATGA
AAGactgaagaaagaaaaagtttttgccATACCATGTAACATCAGAAAAG
AAGAAGAGGTGTCTTCCTTGATGAAAGAAACAGTATCGAAGTTTGGTCAA
CTCAACTACCTTGTCAATAATGGAGGTGGCCAATTTATCTCACCATTTTC
CATGATCAACAAAAAAGGATGGAGTGCCGTTATTGACACAAATCTAAACG
GAACTTTCCATTGTTTGAAAGAAGCTTACGATGCATGGATGGGGGAACAT
GGAGGATCAATTGTAAACATCACTGTTGATAATTTCAATGGAATGCCTTA
CATGTCGCACAGTGGAGCAGCAAGGGCAGGTGTAACCAATCTCACCAAAA
CATTAGCACTTGAATGGGCTCCAAATAATATACGAATAAACTGTGTTGCT
CCAGGAGTAATCTATTCCGATACTGCAGCTGCGAATTATAAAGACCATCC
AACACTCTTTGAAGAAGTCAAAAAGTCCATTCCATTCAAAAGAACTGGAA
CTGTAGAGGAGATCTCTGGCACAGTATGCTTTCTGCTATCACCTGCAGCT
AGTTTCATTTCTGGCGATGTGTGGAAAATTGACGGAGCACAGAGTTTGAA
TGGACACAATACCTTTGAATTGCCCAATAATTATAAAACGAAGGAATATT
CGTGGCAGGATTTGGATGGCTTCAAAtcgaaattataaatggcggcaaaa
TTCGGATCAGTTTTTAGGGATGGCctttttaaaaatcaagttGCTGTTGT
CACAGGAGGTGGAACTGGAATTGGAAAAGCTATTGCTTATGAGCTTGCAA
CACTAGGGTGCAATGTTGTTATAtcttcaagaaaaaaagaagtcatCGAG
AAAAGCTCTAAAGAACTCAATGAAAGactgaagaaagaaaaagtttttgc
cATACCATGTAACATCAGAAAAGAAGAAGAGGTGTCTTCCTTGATGAAAG
AAACAGTATCGAAGTTTGGTCAACTCAACTACCTTGTCAATAATGGAGGT
GGCCAATTTATCTCACCATTTTCCATGATCAACAAAAAAGGATGGAGTGC
CGTTATTGACACAAATCTAAACGGAACTTTCCATTGTTTGAAAGAAGCTT
ACGATGCATGGATGGGGGAACATGGAGGATCAATTGTAAACATCACTGTT
GATAATTTCAATGGAATGCCTTACATGTCGCACAGTGGAGCAGCAAGGGC
AGGTGTAACCAATCTCACCAAAACATTAGCACTTGAATGGGCTCCAAATA
ATATACGAATAAACTGTGTTGCTCCAGGAGTAATCTATTCCGATACTGCA
GCTGCGAATTATAAAGACCATCCAACACTCTTTGAAGAAGTCAAAAAGTC
CATTCCATTCAAAAGAACTGGAACTGTAGAGGAGATCTCTGGCACAGTAT
GCTTTCTGCTATCACCTGCAGCTAGTTTCATTTCTGGCGATGTGTGGAAA
ATTGACGGAGCACAGAGTTTGAATGGACACAATACCTTTGAATTGCCCAA
TAATTATAAAACGAAGGAATATTCGTGGCAGGATTTGGATGGCTTCAAAt
cgaaattataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012497-exon-sc0000145-1491911889:102999..103598 | TCONS_00012497-exon-sc0000145-1491911889:102999..103598 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:102999..103598 | TCONS_00012497-exon-sc0000145-1510915933:102999..103598 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:102999..103598 | TCONS_00012497-exon-sc0000145-1575043694:102999..103598 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:109082..109247 | TCONS_00012497-exon-sc0000145-1491911889:109082..109247 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:109082..109247 | TCONS_00012497-exon-sc0000145-1510915933:109082..109247 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:109082..109247 | TCONS_00012497-exon-sc0000145-1575043694:109082..109247 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:109797..109878 | TCONS_00012497-exon-sc0000145-1491911889:109797..109878 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:109797..109878 | TCONS_00012497-exon-sc0000145-1510915933:109797..109878 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:109797..109878 | TCONS_00012497-exon-sc0000145-1575043694:109797..109878 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:110390..110486 | TCONS_00012497-exon-sc0000145-1491911889:110390..110486 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:110390..110486 | TCONS_00012497-exon-sc0000145-1510915933:110390..110486 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:110390..110486 | TCONS_00012497-exon-sc0000145-1575043694:110390..110486 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:111875..111982 | TCONS_00012497-exon-sc0000145-1491911889:111875..111982 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:111875..111982 | TCONS_00012497-exon-sc0000145-1510915933:111875..111982 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:111875..111982 | TCONS_00012497-exon-sc0000145-1575043694:111875..111982 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:112506..112620 | TCONS_00012497-exon-sc0000145-1491911889:112506..112620 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:112506..112620 | TCONS_00012497-exon-sc0000145-1510915933:112506..112620 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:112506..112620 | TCONS_00012497-exon-sc0000145-1575043694:112506..112620 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1491911889:113701..114284 | TCONS_00012497-exon-sc0000145-1491911889:113701..114284 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1510915933:113701..114284 | TCONS_00012497-exon-sc0000145-1510915933:113701..114284 | Clytia hemisphaerica | exon |
| TCONS_00012497-exon-sc0000145-1575043694:113701..114284 | TCONS_00012497-exon-sc0000145-1575043694:113701..114284 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145 | supercontig | sc0000145:102999..114284 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00012497 vs. Swiss-Prot (Human)
Match: PECR (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 5.421e-84 Identity = 156/274 (56.93%), Postives = 191/274 (69.71%), Query Frame = 1
Query: 364 AKFGSVFRDGLFKNQXXXXXXXXXXXXXXXXYELATLGCNVVISSRKKEVIEKSSKELNERL---KKEKVFAIPCNIRKEEEVSSLMKETVSKFGQLNYLVNNGGGQFISPFSMINKKGWSAVIDTNLNGTFHCLKEAYDAWMGEHGGSIVNITVDNFNGMPYMSHSGAARAGVTNLTKTLALEWAPNNIRINCVAPGVIYSDTAAANYKD-HPTLFEEVKKSIPFKRTGTVEEISGTVCFLLSPAASFISGDVWKIDGAQSLNGHNTFELPNN 1173
AK S GL + QVA+VTGG TGIGKAI EL LG NVVI+SRK E ++ ++ EL L K+ +V I CNIR EEEV++L+K T+ FG++N+LVNNGGGQF+SP I+ KGW AV++TNL GTF+ K Y +WM EHGGSIVNI V G P HSGAARAGV NLTK+LALEWA + IRINCVAPGVIYS TA NY + FE + IP KR G EE+S VCFLLSPAASFI+G +DG +SL H ++E+P++
Sbjct: 5 AKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH-SYEVPDH 277
The following BLAST results are available for this feature:
|
