XLOC_007080 (gene) - C. hemisphaerica

Overview
NameXLOC_007080
Unique NameXLOC_007080
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000146:145898..155223+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007080 ID=XLOC_007080|Name=XLOC_007080|organism=Clytia hemisphaerica|type=gene|length=9326bp|location=Sequence derived from alignment at sc0000146:145898..155223+ (Clytia hemisphaerica)
ACTAACCTCCCTCTCCctccccctctccccccttcactgcgtaggTACTA TGTGGGTGGCCCCTGTGCCAATCTACAAAAGCGTTCATATTGAATTAATT GTCTTCAAATCAAAGTTATcgtcttttatttatttcagcACAAAAGAAAT AGAATTACTAAAAAACCATTAACTAACGATTCAGCAAATGGTCAATATAC AATgagtgaaaaaaactaaaatgacaAATCGAATATGTAATCAGCATATT AGGAATGTTTGTCCAATGCTATAATCAAGTATCTTCAACATGACATCTAC GGAGGAGAGCAAGGATGTAGAGTTTGACTATGGTGATGAATTCTTTACCA AATCAGCCCAAGATACTGTTGAATCTCAAGATGCAGATCCTGCACAGCTG ACAGAGACAAATACATCCGTCGAGAGCAAAGAAGAGTTGAATCAAAACAG GATTGAGAATAAATTACCTGAGTTAGAAATTACTGATCATGAACAAGATG TAATGAAATCTACTGGTGAAAAACAAGCTTCCATCAACGATATCACATCG GAGCCTGGTGAATCACCAGAAACTGAGGAGGCCAGGGTTGAAACGAATGC TGAATCTGATGGTGAAGTTGATGAATGGGATGAACTGCAACTGGATCCTA AAAATTGTAGGTGTATAGTTAAACAGAAATTTACTCTTTCAATGAAATCA GAGTCCAATATcattatttgaaagtttcttagaaatttttcaaaatatca tatTCCTTTATTCACTAGATAGGCTATAACTGCTCACATGTTTCTGTGTC AAAATCCACCCGTGCTCATTTATATTTTCCAAAATGACTTTTCAATCAAA TTACTGCTTTTCTTTCAGCTGCCGAAAATCCTGAAAACATGACATCTCCA ATGGAATTCAAAGAAGCTTTGCAATTCTTCGAAAACATCGATCTCAACCA ATACGCTGATAAAATACGAACAGCTCCAAAAAGATCTGGGATTTCTTCAG TCTTTCATAACATTGTTGGACCACCGAAACTTCACAAATCACTAGTCCCT GAACGCAATTTGATATTCACTCTAGCCTTGATACCATTTCAAAATGATGA ACTGGTGCACGTTCGGATATTACAGACATTATATAAATCATTATCCAACA GGAAATTTGATTGTCCACGTTTTGGCCCTCATTGGGAACTGATCGGGTTT CAAGGTAAGCGAGTAATAATAATTTtgtaagaacacgaggctgactATGA TTTCAGGTTATTTTAATCTTcaggtaaaaaaaacaaaactaataaaaacG TTGTAAGAACGTAGATGACGACGTagtcttttatacggaaacacccgaaa acacGGGGCATTTGTcaccagttttgaatttaaactaTTAAACTGATGGC AAAcaccatagtgtcctcccccctggattcaggggggggaatgggttttg aggtcaaaaggacgtataggggggaaagaattttttttgtagcCAGGGTG GGGGAAAACGATGGgggggggaatggaaaattttcattctaggcatgggg gggactcaccaaaatcaattcaaaattgaaaaacatctggttttattcat ttatttcaaCCAGCAATATTACGGTTTAAAAAcaaccatcctttccattt attcttgaattagaactaccttagggaaaacaataagcgttaaattcatc aaattacagctttttatgCGTGAGGGGGGGGGACAGAGAAATTTTTGGAG GCAGGGGGGGGAAGAATGAGGGGgtgatggaaaattttcattctaggcat gggggggactcaccaaaatcaattcaaaattgaaaaacatctggttttat tcatttatttcaaCCAGCAATATTACGGTTTAAAAAcaaccatcctttcc atttattcttgaattagaactaccttagggaaaacaataagcgttaaatt catcaaattacagctttttatgCGTGAGGGGGGGGGACAGAGAAATTTTT GGAGGCAGGGGGGGGAAGAATGAGGGGgtgatggaaaattttcattctag gcatgggggggactcaccaaaatcaattcaaaattgaaaaacatctggtt ttattcatttatttcaaCCAGCAATATTACGGTTTAAAAAcaaccatcct ttccatttattcttgaattagaactaccttagggaaaacaataagcgtta aattcatcaaattacagctttttatgcgtgagggggggggggacagAGAA ATTTTTGGAGGCAGGGTGGGGAAGAATGAGGGGgtgatggaaaattttca ttctaggcatggggggggagacaccctgaaggacactatgaACACTCGCT GTATTTcgtgtgtttccgtataaaagattacgtcatgaatataaaaaatt aagaacatcgagCAGCAGTTTTAGTCCTAGACCAGTAGTTAGTGTATTCC CCTTCTTGAAGTGTATTTTTTAGTATTATCGActcatttctttcaaacct aGCAAATCAGAGGAAAGGAGAACAGTTGTTacactttgttttttttcacc ttATAGGTAATGACCCTTCAACAGATCTCCGTGGCTGTGGAATGCTTGGC TTGTTAACAACTCTTCACTTTGTTACATCATCTAACACCAAAACGCTAGC TTCAAACATTTATCAACTATCACGTCATGAGATTCAAAATTTCCCTTTTT GCGTGATGTCTATCAATATCACACGCATCTCTTTACAAGTGCTTCGTAGT GGGAAAATTAACAAGTAAGTCGTTTGTACGTATCGTCAAATAAAGGTAGT CTGATGATAGCTCTAgcactttttaacaaaaatggAAATTATTCTTTTCT ATGTAATTCATGAcatttatgacgtattgttttatacggaagcactcAAA AAAGACCGAgtgtttgccactaattttgaaCTTGAACAATAAAACTAGTA GCCAACGCTCAGGCTATTTTCGATgcaaacattacgtaatgaatacCATG AATCCTGATGAGTGATTTCTTGTTAGGTATCTTTATTTCACTGATAAACG TACTTGTCCTTAAgttattttcgaaaatcctgGTTATAAATTGTACTTTG GACATAAACTGGTCTGGCCCAATGATGCGAGAGGAATTTCTGGAAACGTA GCCAAATGTAAATTTCGTGATTCAAGCAACGATAaccttcaaaaatggtc taatCATCCttctatttttgtttcagaGAGTGCAACCAGCGTTTAAAACA AAGACATAAATCGAAACAGAAATATACTAACGACATAGACCTTACGGTTT ACGATGTTTTTCAAGAACTTTACGAAGCCATATTCTACAAATTATATACA GTTTGGAAGAACGAAGGAAAAACAATGACAGAGTCTGGTTTCGTCATAAG AGATATTGAAACATTAGCCAAACAAAAACCAATGGATTTATTGAAAAACT ATAGGAAAAGACTTTCTTCTGAAGGAAGCAAGAAGAAAAATGGTGGAAAC CAGAATGAAGAGAAAATCGAATCCTTTGTAGGAATTGAAGACTTAGGATG AAGAACGCTTTTCACTAGGCAAAAGAAGGTAATTTAATTAGCACTAACCA CTAATGTTTCCTCTGGCAAAGTTACTTGAGCATGTTAACTGGGTATCTTC ATTAGCCAATGGGCTTCTTTTCATTCGTTACATTATCTTATTACCAAATT Accgattgattgattgattgattgattgattgattgattgattgattgat tgattgattgattgattgattgattgattgattgattgattgattgattg atataCAGATGCAAGATTTCTATTTTGCGAGTAAGAGGGTTTTAGAGTCA AATGATCCACTTATAAAGATTTATAATGACCAGGCTCATATAACTTGGAC GCACCAATGACAATTTGTGACTGCGTAAATACCCTTCAGTAATTCCTACA CTTTactttaaaattattattttgaacTAACAGGAAAGTTggatttttta agttttcagGGCTGTATTATTTTagtagtttttagtttttttaaaaaatt ttttattttgtacataTGAACTTTGAATTTTAACTGCCCACGTGTAAATT ATTGATTCCATAAAGATTAGAATTTTTGAAAGAGAACATTGGTTCGCAAG ATGAAGAGCAAACGGTTAAAaagccaaaacaaaaacaaatcttttatctt atgtttttcctgtttttttttctattattttttttcgtctTCTGTTTTTA ATAATCAAAATTCGATAGTTTTTGTATAGCTTTGTGTTATTTCAATCACG AGAATTATTTCGAAGTACCTTGACCATAATACTCTTCTAGAGTCTGAGTA TCAAGtgcctaaaactcaaaaagtttgaGAAAAGTAAAGAGAATGTTTCT CACAATCTTACTTTCTTGTCAAAGTTAAGTACTTTGTAAGTGCCTGTGTC CAGAATGTATTGACAAAGAGAATTATTTAGTTACCCATTGCTTAAAACAT TGTTATCGAACTATTTGGActataaacgttttttataagaacatcctaga tttttgaattttgacttttttagttttaagccttaaatgttcttaaaatg ttctcatttttACCAGCTCCTTCTGCAATTATCTAAGAGATAATGTTTTG ACTTCTGTCTTTAAAACCTGAAAAGTGTTCTTAACAGGACCACAGAagat atctcaaaccatcttaTTCCCTttttcttagcttgttcttaatattttgg tcatcgaaaccttatgtttttataaagtttgttcttatagaaaaacgtgt atttttacactgtctatttatttttcattctgaagaagcaatttgaaatt ttttggataTCTCTAGACTAGAGATTTTATTTCTGTTAGATTCGATTTCT ATGTTGATATTGGTTGCCATGGTGAAGCACAATCAGCTGATCAAATTGCA ATACAATATCAAAAGGACGATGACAACAATGCGCCATTATGGTTAAAAGT CTCGTCTTACCAAATAATGTGAGTGATACTTAATATTTTGCtactttttt ctctttctgtcattttataaaatttggttTTGTCAGCATTTTACTTCGTT TACCTCTGAATATGAAAGTCTTAAAGGGAAtaagatggtttgagatattt ggtcTGTGTAGAAATCTTCTGTAGTCCTGAGTAAAACCTCAAAAGTATTT TCgtctaactattttccaaaatcgagattGAGCGCTCTTACAAGGTTCTT ACGTTTTTNGGTCCTGAGAAAATCTCCCAAGTATTTTCGTCTAAATTTTT TCCAAAGTAAAGATATCAAAATGGGTTCTTACGTAGAAATCTTATGGTTT TCTTAAGTCGAAAACATGTATATTATACTTGCCAGATATCTCGAACCATC TGATTGTCCCTTTAACGTCAATTGACTACACAAAGACATTGTTCAAAGGT TTGTCCGTGACGGTAGATGTAAATCTTGAATGTAATTGGCATACGAAAAT CTTTTGGCATATCTTCTTTAATGATCGTGTAGGAGGTGTCAATATTCTAC GTCAACTCACGAATCTCATTCAAAAAAACACTTGAGaacattttgtttat ttgtaTTCGTCTGATGAATTTATGTTTAGTCAATAGAAAAGGTGACCTTG ATAAGCCATATTGATGCATATccgggaacaagaaaaatagtTTAAGTGTT TGACATAGTTTACGAAAAGTTTATGAAAATGCGTTTGTTAATGTCATATT TTACTAAACCATCGATGGGATTGGGTTTCTTTACCTCTCGCTGgtacaat ctcggtcaaaatatattgggaattttggttaatGCCTCGTTTTCAGCAAC TAAAAGTTCGGGTGAAAATGtcgcttttgggcaaatttataaatttattc gaatattcaattcgggaggggtttatagacttccaggctatattctgggc cctattggaccattgttGAACTTTTAGTTCCTCAGATCCTATACTCTACC CGTCCAACCTAATtcagagcgcttccaaatcgtttgtggttgtgagattt cgtgggaatttcccttttttctcaaatattatgactttgattgtataTTA CGGTATGCGTTTTATGGAACGTTTTTTTAATGTTGGTTTTTCATTATTTG ATGATTTAAgacttttaccttttttttattgataatattCCATTTCTGAT TATATTTTCAACGCGCACAAAATCACTATCTAGTTCGAATTCCACAAAGA GTTTACAGCCTTTCGTCTCCGCACGCTGTCGATTGTATCCAATACTTTGA ATGTatagttttttcgtttttttcccattttccataatttctgaaatttc acctGGGTTTAGTTATTCATTacttagttctcgccaaaataagttcttac catatttaaatttttactatttttgtcCTCGCCAAATCAGTTCCCTTAAA GTAGTTAGGGGACTAAATACAATATCGGGTACCGTGACTTTCGTTACAGC TGTATCAGTCAAGTCTCTTTGGTATGGGGtaccaattttccaaaaaggtg GAGTATGAAGATAAACCCTGAAATATATTCACTACATTTGGTTCTAAGAT Ttagagatgccttggagtttttacaagatgcttaactgattggttatttt taaacaatagggatgacgcgttctttagtaaaagtaataaaatcgtttgt ctcaacatttaacgaccaacagagtcatcaaagaacttgtaaaaactcca gcttgacccaagATTTAAATTAGTCAATCCTCCTTNGTTTAACGACCAAC AtagtcatcaaagaacttgtaaaaactctagCTTGACCCAAGATTTAAAT TAGTAAATCCTCCTTCAAATGGTGAAAAGtatggatttttaacattttta gttttctcacaaCCTCACTTCaaacttgtacactttttttaaatacctGG TTTTATTTTAGCCTTTTCTTGCGAGTGTTGTGTTAACCGTCTGAAAGGTC TTATATTTATCTTTAAGATTAACACAGTGCAAGGATTTCCTCATCTcagt ttttttttggtttgtacgatgtacacgtttttgttataagaataaactat ataagaacataaggcttcgattgccaaaatgataagaacaagttaagaac attttaagtcttcgcagactctaaaacacccaatttcttgggaagatgga caaaaatgctcaagaaatggtgaaaataaaaaccttttaagaacattttt aggcttgtaACTTAaacagttaagaacatccgaaggcttcaaaaattttg gatgttcttataaaaaaagacgtATAAACGTAAATCGTGTAAAGTGTTTC GATTACTCTCTTTCTAAACTATATTTTTACTTCACTTGTTGATTTATGTT CTGTTCAAATTTGCTTTTACTTTGAATATATGTTTCAAATTTGCTTTACT TTgaagtacaatcatggtcaaaatctattgagaatttagcttatttcctc gtttttcgagtTTGGAGTTTGgatgagaaagtcgattttgggccatctct gatatatttcaattttgcaCGGGTNGGGAGTTCGggtgagaaagtcgatt ttgggccatctcttaaatttaatctgatatatttcaattttgcacgggtt tatagacttccaggttatattatgagccttattgaaccatttttgaactt ttggatcctcagatcagcctaaggtcctaagttttaagtccagcgttaaa actctacccttctaaCCTAACTTATAGCAGTTCAAAATCGTTCCAATTTT tcctcaaatattacgaccatgattgtagttcgATTTGAAATTATGGCTGT TCAGCCACTTTTCAGCTTATAGAGTGTAATTAATATTTCTGACTTGGTTT TGGGACCCTTCCAGAGACTCAATTGCTAATTTATGGTTATGAATCCCTTC GAGAGCATTTCGAGGGtgtaaaaagggacccttatggctctcACATACTT GACGCCCATATTTTCTCTAACTACCCCCACCCCCTCTCAAATACGTCACT ATTCATTTTTTCCTTCAATAAAGTAGATTCCAAAACTATGTCCATTGGGT TTTTTGACCTGGGAACAAACTTTTTATCCCCTTTGtggttttgatagaaa ttttcataccCACTTtgggaagaagttccaccggggctctgagacagggg tgtagctGACGATTGTCTACTAAAGACTTGAAACAAGGATAGTTGCATag aatgaaatttttgttttttatcttgatGGTTAAGACTTGGTTTACTGAGG AATTCTCTCCCTCGATAACTCTTGTAATGACGGTATTAACAACTGAagta tttgatttttgatttttttgacttaATGAACTGCTAGAAAGGAGTTGTTT TATACTAACGACGTGTGAATATTTTGTCTCGATACTTCGTTTGAAAATCA GTTACATTTGCGTCTTAAGGGTTCAACAAGCTAGGCAAAACGCATGCTTT GAAATCAATagttgaaactttttcaaaaatataagcACAATTAATCTTGT CAACGTTTGTTTTTTGTACCGATTCAgttgttttgagaaagttttcTTGC TAAGAATGTAACATTTGGAGGTATGCCTATGAGACAGAGTTATATCATGT TTTGTCTACCTCGTCATCGATTTTTTAACGTTCTAATCTTACAGAGTCAG TGTTGAGAAATGATGTTTAGCCGAGACAAAGATTTAAATAACAATGGAGT ACAGTACCGTTTACCGGCATATGATAAATTCAAAACGCTTAATGAACTTG AATATGAAAAACGTTTCACAAACAACAACCTACATTACGTCAACCCTTTA CCACGTGATGAACAGACTTTCAGCGTAACAGGAAAACGCATGGTTCAagt caaagaaaatttgagtgaAATCCTAAAACAAATCGAGAAAGAAACTTTAG AACGTTTACAACAATCGCTTGAAGAGAAAcatgaaaattttctaaaatcg gaATACGATTTTCCACTGACGGTGGATGAACAACAGGACTCCGACGTTAT GTCGGAACACGGAAACCGTGTGTACGTTCCGAACGATACTTATTACCGTG AAAAGGAAATTCAGGATGCAGCACAAAACATCAGTTGTCGAATTTTGTTA CGTTATAATCAACCAAATGAAAAGGATCAAGAACCACCAGATTTACAAAA CGTCCAACCAAACGTTCAGGTGGAATCGAATAAGCCGCTAGATGATTATT CTAGCGCAAAAGCAGCTTCAGCGAGAACACAAAATGAGAATGATGAAGAT TATGAGATTCACgatttggaaagata
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012620TCONS_00012620Clytia hemisphaericatranscript
TCONS_00012621TCONS_00012621Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012621-proteinTCONS_00012621-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146supercontigsc0000146:145898..155223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.3 7.57 3.77 2.31 69.01 48.91 37.95 37.14 27.95 27.66 19.1 17.66 10.33 7.74 9.81 10.91 11.63 11.75 6.56 6.97 8.24 7.35 15.13 14.47 14.87 15.43 11.08 9.46 13.08 12.32