XLOC_007194 (gene) - C. hemisphaerica

Overview
NameXLOC_007194
Unique NameXLOC_007194
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000156:115330..125616-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007194 ID=XLOC_007194|Name=XLOC_007194|organism=Clytia hemisphaerica|type=gene|length=10287bp|location=Sequence derived from alignment at sc0000156:115330..125616- (Clytia hemisphaerica)
AAGGATAAGACTTAGGTCTGTAGATTTTCTTAGAATTAAAGAATGCGTTT
AACGGATGTTACCTACGAAGCTTCACTAGAAACAAATCACAACAACGAAA
ATATGACTTCTTTAAGCTGGAATGAATACTGTGTGTTTTGAAAGATGTTT
GTTGTGAAGGGAAACTGACAATGAATTCATTAATTGAAAATGGCTGCTCC
AGAGGATAATGATCATTTAATACCAGGTTTCTATTTTTAATGCACTATTT
TTTTTTTTCAAGTACTTTCGACAACATGCTAATTTTTCATTTCTTTTGTC
TTTCTTTCCCTAAAAAGTTTTATTCATATTAGTCATAGCATAGGCAATGG
TCATTTGCAAATCACAAGTAGGGAAAATATTGAATCTACCCTTTGATTGC
GGTTACTGTGATAGCCTGATTGGGTTCTTTCTTTCCGTCAGTCAGGCACA
TCCCCAGACGATGTCGATGTCAATCGAACAGAATCGAACGAAAATTCCAA
TCGAACGCAATCGAATGATTGCGATTCGATTGCCGAACACAATCGAATAT
CAATCAAACATCAAATTCTGGGTAAAATTCGATTACGTTCGATTGATATT
TCGATTACGTTCGATTGATATTCGATTACGTTCGATTGATATTCGATTGT
CATTTCGATTGATGTTCGATTAGGTTCGATTGATATTACGTTTGACAGGT
GGTCGATTTAATTAGATTCCAATTTACCTCAATATTCCTTTCAATTTCGA
GCGCCTCTTATCCAGACCCCCGCGCTCGATAGGATCGATCATCGGAACGG
CTCGATGACGGATCGATATGTGATCGATGGATTACTTATCGATCCGGATA
GGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATCGATCATTAA
TCGATTCGTCATCGATCATTAATCGAGTATGCATCGATTATAAATCGATT
ATAAATCGAGCTAGGGCTCAGGTGAAATTCCGTAATCTAAACCTTCCAGC
AGATGTTGAAAGTTTCCCCGACCTTTTCCCAGAGCTTTCTTAGCGTGTCG
GAAGAAAATTTCTACATCGGGTGCCAGATAAGTACCGATAAGTAAATCCG
GTTTGACGCCATTAGATCGATTAATCAATATAAAAACGGTTGATATTTTG
ATTGGATCGATAGAGGTGTCGATAGGTAATCGATAGGTATCGATAGGTGT
CGATAGGTAATCGATAGGTGTCGATAGGTAATCGATAGGCGTCGATAGGT
AATCGATAGGTGTCGATAGATAATCGTTAGCAAGAAAGATCGATTATTAT
TATTATTAGAGCTCGATTTTTAGAAAGAGTCGATAGGGTTGATAAGATCG
ATAAAAGATCGATGATAGATCGATGATAGATCGATAACTAATCATAAGCT
TAAAAAAATCTTGAGTATCGATCCTCTATCGATCTCTTATCCGGATCGAT
AAGTAATCCATCGATCACATATCGATCCGTCATCGAGCCGTTCCGATGAT
CGATCCTATCGAGCGCGGGGGTCTGGTCTTATTAGGGAGGTTAAGTATCG
ATACAATAGGTAAATCAACGCAACGAACGGGCTTTGACACACAACCTGCA
GTAAACATGTGGGCCTGCATGACCTGCATTTTCTAGAATCCAGGCTAAGA
TGATTTATATCATCTCGTTTAACTCTTCAAATGTTGAACGAGAATCAACG
TTAACCAACAGAATCAATTAGTCGAACCAGTCGAATGCATAATATAAGCC
AACCGAACGTTAGTCGAACACAATCGAATCAATCGAATCCAGGCACTAAT
CGAACGCAATCGAATCAATTGAGAAAATTGCGGTAATATTCAATTGGCAT
TCGATTACGTTCAGCAATCGAATTTCAATCATTCGATTGCGTTCGATTGC
GTTCAATTGATTCGGCGTTCGATTCGTTCGATTGGCATCGTCTGGACATC
CTGGCAAATGAACCGGGTGAGCATTTGCATGGGGTATTCGCCACCCAGTG
TAAATGAGATAGGACGTCTCAGGCTAAAAGCGTGAAAATGAATAAAAATG
AACTTCAAACTGAAAAAGGGAAAAAATAAAAGGAAGAAAACTGGGAACTT
TATTTTTTCGTTAAAAGTTTCTTCAATCTTCAAAGACAAAATTGACCCAT
GGAAAAAAAAATTTCATCTATGCAGTTCTTTGAAATGAAGCAAAATATTT
CCAACCCGGTTCAATTAAACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGCGCTATTACGTCACTTTCATTTTCGACCCC
GTTCATTTGCCAATGGTCGCAAGTGAAAAATACCCCGTTCATTTGCCAGG
ATGTGCCTGACTGTCCGTGAATGGTCCTAAGAAGGCGAGGCCGAGAGGGG
AATTTTATGTTCTGTTTAGGCGAGGGGAATTTAATGTTCTGTTTACCGTC
GCGTTGCAAAAAATATTTGATGCGGCAAAATTTCATTATTCATTATTCAT
TATTCCTACCTGGTGCTTCCCATCTCCAACGAAGTTGAATTCCACCGTGA
AATCGAGCTGCTTTCACTTTCGGAATCAAAATGACATGCGCGAAAATTCA
AACGTGTTCGAGACGCGTCTCTAAAACGCGAATTTCTACAACACCCTTTT
AGCCGCCCACTGCTTAAAAAAATACCTGCCCCATTCGCGGACGTGATTGG
AACCATTTTTTTACTTGAGGCGCACATTTTGTTAGCGAAGATGTTATTTT
TTATTCACTTTGAGTGTTTTGGATAGCTTGGCACAGGATGCTGGCAGTTG
ACGGTAAACAGAACATCAAATTCCCCTTGCCTTACCGTCGACCGCCCGTC
GAGTAAGAGTTTGGCCATAACGAATAATTGCAATTCGATTGTCGAACGCA
ATCGAATCGCAATCGAATCGCAATCGAATATTACCCAGGATTTGCCGTTC
GATTGCTTCGATCACGTTCAATTGTATTCGATTATGTTCGATTGATTTAG
ATATTATTCGCTTTCGTACAATACTTAATAAGCGCTCGGCCGCCCACGCT
AAAAAGCTCTAACAGAGTGATCCAATTTAATTTAATCGCAATCAAACTCA
TCAAACATAATTGTAATCGAACCAATAGAACATAGTCAACTGTTAATCGA
ACCAATCTAACCTTATTCGAACGCAATCGAACACAATCGAATATTACCCG
GAAATTGGCCGTTCGATTGGGATTCGATAAGCAAATCACAATTATTCGAT
CGCGTTCGATTACGTTCGATTGGTTCGATTGCGATTTTTGTTCGAAGTTG
TTTGATTGACACCGTCTGGCTTTACGTCTTGCCTATCCAAAAGAAAAGTA
CAAAAAGTTATTCAATTCTTTCTTGGAAAAAGTCCTTTTTAAGGATCTTA
GGTTTACTCCCCGGCATTAAGACAAAGATGTTATGAAATTTCAACCTTTT
TTTCACAAGATAAGAAAAAGAAATATGTTATATTCATTGGCACTCTGCTG
GCTTTTTAAGCTCAAAAGTTAGAGGTTAGCAAGATTTTTGAGAAATCGCA
AAGTTTTGTTTACAAAATTGAAACATCCACGATGGCTTGTAGAAATATGC
TCTCCATCCGTGTTGCTCCATTTTTCAATCTCACCATTCTGGTCTGTAAA
ATGCATAATTTTGAGAAAAAAATAAATAAATAAAAACTTTATCTCAGGAA
CCTTCCTACCAAGTTTCAATGCTGCAGCATTAATAGAAATAAAATTAAAT
TAATAAAAGTGTGTTTTTTGACATAACACACAGATTTTTTGTTTTAAAAC
TATGATTTTTTCAAAAACCTTCAAAAATTGTTCTTAATAAAAGTGGTATT
TTCATGAGATAAAAATTTTTATATCTCACAAACGGCTTGACCAATTTTGA
TGTTAATGACCCCTCATTTTTTTTCTTTTTTGAAGCTCTTTCAAATGAAC
ATACTCTCAACAGGTAGAAAAGGTCCCTACTTTAATCAAATACTCTTAAA
TTCTTCAAAATATATAAAGTTCGATTAAGTTCGACTAAAGAAATCGAACT
TAATCGAACTTTTTTACAAATCAAAATAGACCTTAAAATATAATAGTTTA
ATAATAGCTTTTATTGGACCTAACCCGGTGGAGGTCCTATAAATTAACCT
TTGTCCGTTCGTTCGTCTGTTCGTTCGTTCGTTCGTCTGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTTGTTCGTTCGTTATTAGCTTTCC
TCATGATTGGCTCGTTAGTTTTTTCTGATTTTTTGCACAAAGATGCATAA
CTATAAACCCTCGAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAAAAAAAAATT
TTGGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACTGGTTTTTTGGACT
TTGTGAAAAATTAGGTCGTTAATTTTTTCTGATTTCTTGCATGAAAGTAG
GTAAAAGATGGCTTAAGCAAATTTTTGCAAAAAAATTTTGTTGGCTCAAA
AAACGCATGTTTATCTGTAAGAATCACTATTAATAAGCATACATCAATGT
TCTTGGTTAAATTACTCAATTTTTTTATGAGATAGATGTTTTTTTGCTCA
TTAAGTTAATATTTCAGGAGTATGAAATGACGTTTTTTTAATAAGAAACA
AACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTT
AATGGTCACGCTCACGTAAATCAATTTTATATGTGTTAAATGCATAACCA
GGTAGGTCCATAAAAGTATCACTTGTTATTAATGATACACCCATGCTACC
CATACGCTCCATCTCATAAATTATTCAAATTGGCAAAACTTAACTTTTGA
ATAATGTTATTGTACACAACATGATATTGTATTTCTTCACCACAAATATA
AAGAGAGTGTTTGTTTATTATACGAATGGCGCCCTGTCAAGTGCTAACCA
ATTCATCCCAAAACTAGTTAAAGCGATTGTCTTGTATTCAATTGAAGTTC
CTCGTAGAAACACTCGCGAATTAGACCCCACTTGTAGAGTCCTACATTTT
ATTTACACGATAGGTTCCATTTGGAAGATTATTTATTTTAAAATCATTCT
AAATCTTTCCAATTCACCCCGTCTTTAAATAAGGTATATATATTCATAGA
ACTCAACGAAAATGCTTTTTAGTATATAAAAAAAACAAAGCTCAATGATA
TTCATGGATTTCCATATTATATAATAATTTGATATTTTTGATTTCAAATT
TATTAGCAGAATTTCTGTTGAAGCTGTCGAACTTGGCCAAACAGAATTTT
TGTCGAATTTTCATTTGTTGAACGTTTTTGTCGTTGAACTTTGTTGAAAG
AAGTTTTTGCCGACTTTGTCAAACCTTTCTTGTTTTCAACTTTGTCAAAC
GTAGATTTTAATTGAATTTGTTAAAAAAAATTTTGCTGTCAAACTTTGTC
GAAAAGATTACTAAGTTTTTTTAAGATTGCAAAAAAATGCCACATAGAAG
AATTCACTATGTCAATAGAGCAGTAAAAAATAAACTTTCTTATTTTTCCA
TTTCTTTGCAAAAGTTCCAGAAAGGAAAATAAAGGAATAATAATGATAAT
TGAATACTCACACTTATCAAGTGTTTGATTATTCACAGATATAATCGATT
GATTAACAATTCAATTGGCAAGTTTGCTAAATTGTGTGTGTAAAGAGGGT
GTACGTGGGTTGCATGGGTCAAAAAATCTTTTGTGCGGGTCAATTTTTTT
TGTGGGTCAAATTTTTTGCGTTGGTCAATTTTTCATGTTAGTCAATTTTT
TTACATGGGTTAATTTTTTTTGCATGTATTAGTATAGTTATTGAAAAACG
TTTGCAGCAGGTATTTCACCTCATCAAATTAATTTGCAAGTTGGAAGCAA
AAAGAGGATTGGTTCTTGGTGATCAGACGACTTGCTGCAACAGAATTCCT
GAGTTAGAATACTTCAATTTGAAGATGAAAAGGCCCAATATTAGACCTTT
GGGCAAACGTGACGGTCTATTTAATAACAAATTACTACAGCATACATCCA
TTACTTGCCTTCCTTTTGACAAATATAATATATACAGGATAATTTTGTCT
CCAGGTAACTAACCGTTGTCTCGTTAATTCACAGTTAGATGGCATTACCA
TTGAAAAAAATTATTTTTTTAGAAACTGGTGCAGTATTTACATTTGGTAG
AAGTCGGTTTGCTGATAATTTAGCAAACAAATTTTGGATAAAGAATGATA
AGTGTGTAAAGATAGCATGTGGTGACCAACATTCTGCTGTTGTTACAGGT
GAGTCCAGCACTATCTTTATTTATAAAATTTCTCCTTATGATTTATGTAC
ATTTCGCACTCCACACTGTATAGACAGTTTTGAAAAGAACTAAACAACTG
CCTAAATTTGGAGTGATTTTATTTGCTTTTAAACTTTTCTATCTTTAAAC
CCTATTAGCCCCAAGCTTTTTTGACTTAATTGTATCCCCAGGGGGGGTAG
AATCTACCACCCTCGATTATTTTCGATCTAGAAGAGCTACGGCCATGAAA
TTTGGTACAGATGTTCTCCATCATGATACAATTTTCCAGGAAGAAAAAAA
AATTGATGACGTCATTCAAAAACTGATGACGTCATCACAAAATTTCCACC
TGTCGGAAAAAAGCCCAAATATATGGTTTACAAAAATGTCTATTACAGAC
GAACCAATAAAGATATTTCGATTCTGTTTGAAGATTCTGAAAGGTAAAAG
ACTGTTCTTTAACATAATTGCCGGTTTTGCAATTTCCAATATTTCTTAAA
ATCTATGCTGAAGATGAGTAAAATTTTCAAAATTTGATGACGTCATAAAT
GATGACGTCATCATTTTCAAAAATTTTCTTTAGATTTTTTANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCCCCCCCCCTGGGGCTAATAGGGTTTAAATGGATAACATGCGGGG
TTCCGTTCAGATTTTTTGAAAAATAAGGGGCATTTATGGTGTCAAAGGTG
ATTGTATATTGCTTGTAAATTGTTGTTCTAAAGATATGATCAATTAAAGA
GAATGTGTCAAGAAAGGTGGACACATACTTACCTTAAACAGCTTACTTTT
TTGATTTTGAGGTACAAAAGGTTGTTGTTACTCGCTAAGGATTTTTGGAA
ATCCCTAAATGTTTATTTTGAAAAGATATTTGTGCAGTGGTAAGAATTAC
TTATAGTAGATAATATTATATGTTGGTGAATTTGAATTTAATTTTAAATT
AAAACAAAACTTTCTTTTCTTTGTAGAACGTGGCAGAGTTTATGTATTTG
GAAATAATGAGTGGGGACAATTGGGGTTAGGACACACTAAGGCAAGCAAT
AAACCATCTTTTATCAAAGGTAAACCGATTTTTCATGCATGGAAACACAT
CACTTGGGTGGATTTCCAGATCTTATTGTAAAGATCAGTACCTTAAAGGA
AGAAATTTTGGCGAGAATTTAATTTGGCGGGTGGCCGAAAAAGTTTTTTT
AGAGGGAATTTAATTTGGCAGTTAACTTGAAAAATTAAATTTGGCAGGAA
TTTAATTTGGCGGATGAAGGAAATTTTTTTGTCCAAAAAACGCCATTAAA
AAAAGAAAAACCTGCTTTAAAGCCTGGAATAGCACANTTTGGCGGATGAA
GGATATTTTTGTCCAAAAAACGCCATTAAAAAAGGAAAAACCTGCTTTAA
AGCCTGGAATAGCACACATTTGGGGGAGTAAATAGAGCAATTTAAATTTG
GCGGGAATTTCATTTGGCAGATGACAGAAAAAAATAAATATGGTAGGAAC
TTATTTTCCTCCTAAAATCTGCCAAATTAAGTTCCCGTCAGTTCCCGCCA
AAATTTCTTCCCTTAAGGTATGCTTTTCATGATGTTTGAGGCTTTTTGGA
CGAATTATTATTTTTATGATTTTATTAAAATAAAATTTGATTGTCATTTT
TTTAGTTTTGAAGCCAGAGAAATGTTTATCAGTATCATGTGGAAGAAGTC
ACACTTTGCTTTATACTCGTGAGTGAAAAATTATTGTAAACGTCTTCAAT
TAAAATTCAAATTTAGCCTCAAATATCAACATTAACTAAGCTTAGCCTTG
ATTGTACCTTTTAAGCCATTGGATGTATAATTCAAACCAGGTTCAAACAC
ATAATATGAGACAATCAATAATCTAGGTGTTTTATGTTTTTGGTACTTGT
CTCAAACTTAGTTGCTTTACTGTGTACTTTTAAATTTCTCTTAGAATCAG
GGAAACTTTTTAGTTTGGGTGGAAACGAAGATGGCCAACTTGGACACGGT
GACCGAAATGTAAGTAATTTCTTTTTTCAAGTCGCAGGGAGGATTATTCT
TTTGTAAGCTCGGGTGAGCATTTTCTTTTTTATTTTGTTTGCCCACTCGA
GAGAATGCTTTTTAACTTTTAGGAAACATATACATCATGTAGATTGTTGT
AAGTATAGTGATATTGGGAGTATTCACATATTTCTTTTTAATTTTCTTTT
TAGAATGAGACTTCACCCAAACAAGTTGAAGAATTAGAATCAGTCAAATT
GAAAGAAATCTCTTGTGGAGCAAATCATTCTGNCGATTTTTCATGCATGG
AAACACATCACTTGGGTGGATTTCCAGATCTTATTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012815TCONS_00012815Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012815-proteinTCONS_00012815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:115330..125616 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.4	12.23	8.31	5.92	66.96	48.44	26.1	31.3	13.57	19.26	14.51	12.57	6.49	7.92	6.35	8.47	8.45	9.87	7.19	9.99	7.78	8.06	8.9	12.33	22.1	22.12	11.82	9.49	9.88	10.07