XLOC_007400 (gene) - C. hemisphaerica

Overview
NameXLOC_007400
Unique NameXLOC_007400
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000163:449636..454717-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007400 ID=XLOC_007400|Name=XLOC_007400|organism=Clytia hemisphaerica|type=gene|length=5082bp|location=Sequence derived from alignment at sc0000163:449636..454717- (Clytia hemisphaerica)
CTTGGAATCAAAGACGACTAAGGTAACAGTGAGATCGAGCTCTAGTTTAG ATAGCCCACTTTTTGCCCCCCCCGGGGGGGGGGGGACTAGGGCAAGAGGG GTTACGGGGAGGCTCCGCTGGTCAGGGGACCTTTTTTAACCCCCCCGGGC CCCGGGGGGGGGGGGGACTAGGGCAAGATGGGTTACGGGGATGCTCCGCT GGTCAGGGTACCTTTTTTAACCTCCACGAGTCCCAGGTAGGGTCGCAGAA AAACCAAAATAGAAAAATCAGTCCCTCGTAGGGTGCCTATTTTTGGAAAA TTTGGGAGAAAAGTAGAAAATTTGAGAACATTTTGGGATTTCAGTCCCAT TCAGGGTCACTTTTTTCGCAAATTTCGAGTCCCACGTAGTGTCCATTTTT CGAACCTCAGCGGAGCACCCCAGTCGGTCGACAAGGGTAGTACCCCCCCC GGGTTTTTGCCCTGCCTATTTTGATTGTGAATTACTCTGAGGTCCGGAAT AATAGGGGGGAGGTCTGAATAAAAGGGGGGGTCTAAAGTTTTTGCAAAAT ATAATAAACGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCT ACTTTCATGCAAAAAATCAGAAAAAATTAATGATCCAATTTTTCACAAAG TCCAAAAAACCCGTTTTTTAGCCGTTTTTTGGCCCAAATTTGCCGCAAAA TTTTTTTTTTCGAAAATCGGGCTCCATCACATTTTGGCCACTACCGTTTT GCACCTTTGTACCAAAAATCAAATGATTCCTATGATTCAATCTCGAGAAA AGCTGGTAACGAACGGACGGACGGACNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCGAAAGATTTTCGAAAATTAATAAG CGGGTGGGGGCGTCTATTCGGGAGGGCTCTGTGGCGTGTTATACCAGTGA ACTGTTATCAGATAGAATAATATCTCACTTTGGCTTCTTCGTCTTCTATT CAGATTCCCTTTGTTAAAAGTGATTATTGGTTGTAAAAATAGTTTCTCAA AATCTGATGCGTGGATAGAAATCTCTTTATAAGGGTATGTTTGCACGGTA TTTTTTCTCAGTTACGAAATTTTTAGTTTTGGAAAACGATTGATATTTAC AAATCTATTTTACCTTACAATCTAGAATTTTAGGAGCTGAAATTTAGTGA TTCCATCAATTTTAACTCTTAAAATTAAAAAATCAATTTTAGTCTATATT TCCGAATAACTAATTTAGGTGAAAACTTGACACCCAAATTTCTTTTCTTA GAAGTGCGTTTTCAAATAGTTTTCAACACTGGTGAATCTATAAAATGAGC TGATTTCAAATATTTAATTCTTATTGGTCAGCCGAAGCTGAGCATTCAAA TAGGTAAAATTTTCCACCATAAGACGGCAAAAAAAAAATCCGATTTTCCG ATCTCACTTTGATTTCTAAACTTTCTTCCGATCGGGTTAACTTTTTGGGT ACTTTTAGCGTGCGTTGTTTTTACAGATCATAATGTAGTGTTTCCAAGAT GGCGGCTCAATTTAGATGTGATAAGTCAGTACAGTGTTGTACCAAAGTAT TTCCAGTGTAAATCTGTTGCAAGCTTCAATTTCTGTCATTTATTTTTTTA ACTCGGCAAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTTCCAGTATAA ATCTGTTGCAAGCTTCAATTTCTGTCATTTATTTTTTAACTCGGCAAATC AAACACATGATTTTCATCAAGGGGACTCTTTTTCTATATCTCTTAAAGCT TTAAAGCCGTTTGCTCAAGTTTTTGTTTATATTGAATTTTCTGATACTTT TTATTGCTGCTTTTTAATAGTTTTTGCAATAAAAACATATTTTTCTTGTT TGCCTCTAGGGGGATCGATGGTGTTATAATGTTATTGGAATTTGATAAAG TCCGGATGCAATCGTGCTTTTTTGGACTTGGACGTGTTTGTTTGTGATAA GGCGAATCGCAAAAAATTGTTCGGTCGAAAATATTTTTCTGTTAAGAAGC AGCTACATCTTGTTGAAAGGGAATCCGTGTGGACTGATCCGAATTTTAAA ATTGAGAAACCGTGGAAAAACTGGTGTTTTCGGTTTACACTCCATTAGCA TTCGATTTGAAAACTTGTAAACACAGAGCGTGCAGAGGTCGACAGTGGAA ATCCAGCAAAGCAGCGGAAAAGCTTTCCGACTACTCTCCAACTCTACCTG CTGACCATAAATCAGGGTCGGTCAGATGACGGGAACCAAATGAAATGATG ACATCACATCTCCTTATTATTGGACTTGCAAAATTATGACAAATGGTCTT TGGAATTTGATCAATTATATCAATATTAATATATACAGTTCTTGTTGAAA TTGATCAAACTATTTTTCACGCAGTTCCGGACGCAGATTGTGCTTTTCTA ACCTTTTCTAACCTTGGCGCACATTTTGACTGAATGATGGAATGGAATGA ATGGCCATAACAGTTTATACATCATACATATCTCTTATCAGACTTGCAGA AAGCGGACTGCAGAAAGTTATGAAAAATGGTTTCTAGAATTTAATGAATT ATACGGTCAAGTTACCCAACATGCACACTCTCGTCACAACTTGCACAGTC ATAACAAACAGATCCATCTGGTCTTCATTTAACATTGTTTTAAAGTTTAA AAAACACTGCCAGTGCTTGGCACAGAAGAGTGGACTCCCAGTTGAAATTA ATTGCTACTCCGCTGCACTGTTGAATTTATTTATTATGGTAGTGTGTTTA CTCCGCTAAGGCGGTAAAGCGATTGCCCAAATTCATAGACCAATCAAAAG GGAGTTTAAAGCAAAATGGGGGAAAAATGTGCTTCCCTGTATAGTTAGGA ATTTTAAGTTTAGATTTCGATTATCATTTGCGACCAGCAAAGTCTTCAAG ATGGTAGTGTGCATGCTGTGTAACTTGACGGCACTAAACTACAAAATTTA TTTACGAAGACTGGATGTAAATTATGTTTTTCTGACCTTGCCAAATTTTG GCTTTGACTGAATAGCAGTCAGTTTTTACGTACCTCATTGGCCTTGTAGA CAACTGACAAATGGTTTCTGTAATTTGACCAAGTCTACCAAAATACAGTT CCTGTTGATATGTTATAAATATGAACTGCGTTTTGCAAAGATTTTGATGC AAATTGTGTTTTTCTGGAGTTGCGCTTAAACAAAAAGTACAGTTTCTATA TATTTGATGGATATCTTTATTTTGGTTCTGACATTTTGGCAATTTTCTAA TTTATTTCTAGATAACACTTTGGTCAGATATGGATATTGTCTACAAAAAA ATAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAATTAACAAAAAGT TTTAATTACACTATGTTTCTCTTTTTTATAGTAATGAACTATAGCTTAAT TGTTTGATGTCGTAGAAACAGTGCTACAATGCTAAAGAGAAGTATACTTT GATCTTCTGGTAGGGGGGGTTCGGTTGGAGGAGCTCTCAGGCTTGTTTTA AATAGTTTTAAATCAAGTTATCAAATGTTTCACGTTTTGTACATTATTCA ACATTTTTAGTCTTCAGTACATCTCTTACATCTGTTAACCCACTTATTAA AGCTATCTAGCTAAGCTCTATTGGCTGACCTTCCAGCCTCGGCTGGTTTA TTTGCATTGAGATGGACAAAAATACTCGAAAATGGCGAAAATAAGAGCAT ATTAAGAACACTTTTAGGTTAAAACTCAAAATTAAGAACATCCAAGGGTT TAAAAAATGTTGGATGTTATTATAAAAAACACTGTATTACCTGTAAAAGT TCGAATGTTTTTCGTTCACAGATATAGCGAGATTTCGAACAACTGTCAAA TGTTTTGCAAGTCGTTCACCGAGTGGCTTGGCATTTCCGATGATTCATGG ACTTTCGAAGATGTTTACAGAGTGGGTTTGGCTATTGGTGGGGCTGTATT GGGCTATTTATTTCGGAGATAGATATTTTTTTCTATATAAAAAGTTGATA TCTCAGGGATTGTTCATGGTATAGTTTTTGATTGGTCCATTTTTCATCTA TTCATTAAAAGAATCATTATATAGATGATGATGATGCATTATCTATCAAT CAGGCGATGACAGTAGGGAGATTTGATTCGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013257TCONS_00013257Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163supercontigsc0000163:449636..454717 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0 0.65 0 0 0 0.37 0.69 0 0.3 0.29 0.76 1.14 2.17 2.11 1.39 2.58 4.4 1.22 0 0.55 0.4 0.33 0 0 0 0.78 0 0 0