XLOC_007482 (gene) - C. hemisphaerica

Overview
NameXLOC_007482
Unique NameXLOC_007482
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000167:318211..324530+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007482 ID=XLOC_007482|Name=XLOC_007482|organism=Clytia hemisphaerica|type=gene|length=6320bp|location=Sequence derived from alignment at sc0000167:318211..324530+ (Clytia hemisphaerica)
GGAAACCGGATACACAAGATATGACTAACGAGTAGCAATAAAGAGATTAT
TCTATGACGTTGATTCCTGAATGACGGTACATTTCTTTTGATGAAGCACC
TGATGTTGTTTTTGCACCTCTATTCAAATCGGCATCTCTCCAAAGGTTAC
ATTTCGTCACGTCTTCACAACGCCTGAAGTTGACCTATATGACGTCAATA
CTACAACCAGATGGTTTTTCCTTATATGGTATGTTTGCTACCATATATGG
ACATTGGCAAATGAAAACTACTTCCTCCTTGATTACCTGATGTTTATATA
AAGACCAAAAGTTGTTTTAGCACTGAAAACTCAGAAATAGATACTATTTA
ACGAGAAAGCCCATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTA
TCAATTCATTATATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTG
GATATGTTTCTTTATGGATGATCCTTATTTTAGTTTATCTTTCAAATATT
GTGAAATCTGAAGATGTATCTAAATCACGTAAGTTGTTAGGTATTTATTC
AAGTCACAATTTTAATCTTGGTCTTCGTTGAAGTCTTTATTCCATGTGCT
CTAATCAGATCGATTTGTCGCGTTATATATTTACATGGAATTTGTCATAT
GTGCATCTAAAATTTAGAAGTGGTTTTCttccaattttaagaaaattggt
GTATTTATTCAAGTCACAATTTTAATCTTGGTCTTCGTTGAAGTCTTTAT
TCCATGTGCTCTAATCAGATCGATTTGTCGCGTTATATATTTACATGGAA
TTTGTCATATGTGCATCTAAAATTTAGAAGTGGTTTTCttccaattttaa
gaaaattggtGTATTTATTCAAGTCACAATTTTAATCTTGGTCTTCGTTG
AAGTCTTTATTCCATGTGCTCTAATCAGATCGATTTGTCGCGTTATATAT
TTACATGGAATTTGTCATATGTGCATCTAAAATTTAGAAGTGGTTTTCTT
CCAATGAAGCTTGGTACTcacgtattaaaaaaaaagtggtgTTTAACACT
TTTTGCGTGCGTTTAACACTAGACTCGTGCGACTTTGGGAAAAACATCCA
AATGTACAAGAGTAATTATGTGAACTTAGTCCAGTACCATCTCTAGGTGT
GGACACTATCAttcattttcattgatttcattTCAGTCATCCTTACATCT
GTGCAAAACAAGGAACAATCTGGGAAGACACCATCGATAACTTCTTCAAC
CAAGTTCGACCATGTGATCGATCAAGGTAAACTTATGCAACCCTAATAAA
TACATCCTCGCGACTTTTGTTTAACAAATTGCTTActttcgggtacctaa
taagtgGGGGGGGAGTGGAAAagttctcaaaacttaataagcgggaggAG
GGGGCTGGAAAAGAAATGTCCTtggtggaaatttttttgaaaaggagcAG
AATTAGAGCAAAAGAGAGACCTTTtattttaaagacatttttctaaaaat
tgataAACGGGGAGAGGTTGAAATAAGAATATCCTGGGTTGtaaaatttt
cgagaaattaaTAAGCTAGGGGGACGCTCaataggtacccgagagtagac
tGTTCGAACATGCACGGGaacaaatttgttcaaattaagGAAAATTTCGA
ATAATGGAGATTTGTTCATAAAGCATTGTTATTAATGGAACAGAAAACAT
GTTTGAGTTGAGGAggcattcgagttaaagagaatcTAGTTTTGAAGCGC
CGAGACAAAAAACGGGCGTGAGTTGAACAAGATGGGAGGCTGATATATAG
GCCTCGAAAAAACTTAGTAAACACTGTTACCCCTTTTCACGGATCTtgta
atgtttcaaaatttctactCTCTATCACTGTTCCAATatcatttgctttt
tattttcataGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAAT
TTAACCGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGGT
ATGTTATATTTCTAAGTTCTAGTCCATCATTTAAATCATATCAGTATTAC
CTTATTAGTAGGGGGCTAGAAATACAGCCGCTTCAAGTTCAAAAGCATAC
TGACCTCAGTACtatcaagacaagatttgacgtcaaatcacagtagagct
gacagttagttggtcttaaagcgACTGTAttcctttgtgtgttttagtca
gagagttgttgtaatacaattttttgctcagaatttcattctctatcaga
tggtaccaatcattttcgtttattttgacttttgaaaataagctattcct
ctaccccttattttcccttgcagttttgccaatggcgtcactattttggt
cataaaaagttttcccgggcctaatccgcgtcctccctctcaaaaatatc
ttgtaatatactgttcttttgaatagactaaaaatggctaggtcgtagaa
aagatgtcacagaaccccaggcttggccccctactatatcggagtttttg
atttttctaaaaaaagcgatgcattgtgggattgtttcgagtgtattaca
atagaattccctcgaggaattcctaagagatttctattgtaatacactcg
aaacaatcccacaatgcatcgcttttttagaaaaatcaaaaactccgata
aggtctattatacaagaagttgatttctttctttcttcttctgtTTGTTT
CGGTACaatatattgagacagactttatttGTATTCATTCTGGTTAGCTT
cgtgtaagtaagtaagtctgcgaccgcagtcggtgGCGagccgaaggctc
ctctttcgatagctatctacccgaaggtaggggaagacgtcactctttct
ccctggattgctccacttacccttgactcTTCTCTTAATaatgctgagca
tcaagcagagaggcatgaaataccattttggaaatctttggtataacccg
gctgggggttgaacccacaaccttgcaaaCTGTAGCTGGATATCGTacta
cttcgaataaacgccccatTTTTTTAAACCTCCccttgaataaacgcccc
tttttGAGAAAAGACTTTGGATGAGTGCCCCCTCCCGCTCGATTAAAAGC
CCTTcctcaaaaccaaaacaaaaattgataaatgtcCGGGATGTTTATTT
GATGTTTGACTGGAAAAGTTCATGACAAATACACAATATAAGAAAGATTT
ACCTTTCGATATCCATTTTAGTCTTATACAGCAAAGAAGAACTCCAGGAC
ATCCTAAAGCAAGACCTCACTACGATACAAACAGAAACCAGCACATTGGA
GCATGATCTTATTATTCTATCagaaaaatcaatatcattAAAAGACTTGA
TACCCAAAAATGCCAACAAAGCTATCAAGAAAAAGATTAAGCAACTCAAG
AAGACCATTCAGAAAGAACTTCAGAAAGGCTTGGTAAGACTGATTAACGA
TTTTGAATGCAAGTTGAAAGAGAGATGTTCTCAAGATAGTCTTAAAGAAG
CAGAATCGTCGTTTTTCAGTAAAGTTAACGATATTGGAGAAGTCCATGAG
CAATGTGATGGTACGTAAGCGTCTTGTTTTAGCCTCTTTTGTTTCTACGT
TCGAGAGGATTAAAAAGTTTTGTCAAAGTgcaattttatcaaaagaaact
gaccaaaatttcaaggggTTAACAAATTATTCCTTAGTAAGATTTTGCAG
AATAATTACTGTGACAGGGATCTATGGATCACATTGCATGAGCTTGAAAT
TTGTACGAATCTATTTCCACCAAGCCAGGTTGGGTGTTCCTATTTTAGTT
TCTTCTTTATCTTAACCTTTATAGATTTCACTCAGGAGTGTGTGGACAGC
TACAAGGAGATTTTAAACAAATTTGACGACTATACTAAAGACCATGTCAG
CCCATTAAAAACCCAACTTCATGatctcaaaaaatcaaaatgtagtCAAT
CAAAAACAATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAG
AAAGTACAACATTGGATTGAGACCATTTTATCAAAACTCAAGGAATTGAT
TGAACAAAAGCTGACACAGCTTAGTGATGGTTCTAAATacaattttgatg
ttttgaatgGACTGAGACTTGATTCGAAAGgtatttgatcatttttaacT
TAACTGAGAGCCAATTTATTAATACAAATCTTCATTCTTCATTTATGGGT
CAAAATAATGTCTAAACCCTAAAATGACACATTTCAGGATAGCATTCAGG
ACtgataatcaaataaatttatatatCCTTTCTCAATACTCCAATCATAT
ATTTCAAACCTTTTCTTGTTAACCAAAATGAAAGGAAATCTCATTTGTTG
AAGTTGAATCCAGGTCACTCCTATATCATTGGGATGAAATAGTAGTTCTA
GGATACACCTGTATTGATCGCAATGTGATGGTCACGGTTCGGCTGTTGTC
CTGATGCAGATGAATATAAAGTGTATTATATTTCTTCCGTTTAGATAAGA
AAAAGGATCCTGATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTA
AAGCAAACATCAGTACAAAATTATAACGAGTTCAACCAAGTCTATCAATA
CTTGTTCGAATTTAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaa
aatatttcgaaatagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAA
GCACAGATCGATGAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGC
ATCATTTGAGATTGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCT
TGTTGATGTTTGAAGAAGAGTTAAGAAAGCTTTTACAAGGTAATTTCATG
TTCATCCATCAATCATATAATCCCAAAAATCTTAATTTGATACTTTAGAA
CCTTTATAGTAACACTGACTGTTACTGACCAGTAGTGTGGTAGCAGGGGG
GAGCAACTCccaaaaaaattgcttttttacaTCCTAAAATTAgcagtttt
cagccaaaaagatgaaaaaaattatttcgctCGCGTGATTGTCacacaaa
tattttaatttttacttttaatatGGGGCGCCAAAACAACAACTTTGGAA
AATTGCTTCCCTAGTTTGCCTACTCTGAATCGCAGACCGAAGGTAGTATA
GTttatgctctctaattcgacgttctactattcgataggctcccttgttc
gatgaaatttaaagtcctcgtcaacaagaaactctcataaacgacgctcc
cttatacGATAGGCTCCCttgttcgatgaaatttaaagtcctcgtcaaca
agaaactctcataaacgacgctcccttatacGATAAGCTCCCTTGTTCca
tgaaaatccgattccccttCAGGACAAATTCGTCAGTGGATACAATCAGT
CTTATAGTTTGCCCCAATTTTGGTTGATCCACCACGCTACTGTAAGCTCT
TTTTCACCAAGCGCTCATTTTTTACTTTCTCCATTTTTAGTTGGATTATC
GGAAACTTGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTGACTT
TCAGAGAACAACTGGAACTTCTTAATAGCAATTATGAAACACTACAAAAT
AATGAACTATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATT
ATCGATTTTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATC
ATGCTGATTTTGTCGAGATTTTCAAACATAAATTTTGTTGACTGGATGAT
TGGTACATACATGGataatttttaataaaagtcTATTCCGTACTTTTTCT
AACATTGCTATTGAGGGGTAAAGGATGCAGCTAAAAGTAATACTTCGTtg
gaaaagataattttgagtagTTTGATGTAAGGATGCAAGCTTTGTTTGTA
GGTTGCTGAActtgaataatttgaaaatgaagaagaaaaaattgggATTT
TTTAACTCGGTCAACAACTTTTAAATatatacttttttcaaaaactttgg
atccCATTGATGATTCTAAATATGTATTCTTCAGATTTTTTCACTTCACA
ACATTTTTCGTTACCGATACCGCTCGTTTCATGGATCATTGATGCCATCA
TTGGctggatttttagaaaatttgatatACGTTATGaaaatcatagtcat
tataaaaaatcccggtctggaaggctttaGTTTCTTGCTATTACTAACAG
TTAAAGCTTGCATATCTtaaattgatttgttttgcataccttttgatcat
gtgattataAAATTAACCAATCTCAAGAGCTGAaatggtaacgtgatcaa
aaagtatgcaaatcgcaaca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013389TCONS_00013389Clytia hemisphaericatranscript
TCONS_00013390TCONS_00013390Clytia hemisphaericatranscript
TCONS_00013391TCONS_00013391Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013390-proteinTCONS_00013390-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:318211..324530 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44	0.54	0.15	0.14	0.95	0.53	1.09	1.03	0.59	0.97	0.93	0.83	0.62	0.28	1.81	1.92	0.4	0.72	0.57	0.59	1.28	1.21	0.83	0.88	1.25	1.47	4.06	4.97	2	1.66