TCONS_00013390 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013390
Unique NameTCONS_00013390
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013390 ID=TCONS_00013390|Name=TCONS_00013390|organism=Clytia hemisphaerica|type=transcript|length=2163bp
ATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATTAT
ATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTT
TATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAA
GATGTATCTAAATCACTCATCCTTACATCTGTGCAAAACAAGGAACAATC
TGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATGTGATCG
ATCAAGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATTTAAC
CGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGTCTTATA
CAGCAAAGAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTACGATAC
AAACAGAAACCAGCACATTGGAGCATGATCTTATTATTCTATCagaaaaa
tcaatatcattAAAAGACTTGATACCCAAAAATGCCAACAAAGCTATCAA
GAAAAAGATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTCAGAAAG
GCTTGGTAAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAGAGATGT
TCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAAAGTTAA
CGATATTGGAGAAGTCCATGAGCAATGTGATGATTTCACTCAGGAGTGTG
TGGACAGCTACAAGGAGATTTTAAACAAATTTGACGACTATACTAAAGAC
CATGTCAGCCCATTAAAAACCCAACTTCATGatctcaaaaaatcaaaatg
tagtCAATCAAAAACAATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTT
TGGAAAAGAAAGTACAACATTGGATTGAGACCATTTTATCAAAACTCAAG
GAATTGATTGAACAAAAGCTGACACAGCTTAGTGATGGTTCTAAATacaa
ttttgatgttttgaatgGACTGAGACTTGATTCGAAAGATAAGAAAAAGG
ATCCTGATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTAAAGCAA
ACATCAGTACAAAATTATAACGAGTTCAACCAAGTCTATCAATACTTGTT
CGAATTTAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaaaatatt
tcgaaatagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAAGCACAG
ATCGATGAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGCATCATT
TGAGATTGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCTTGTTGA
TGTTTGAAGAAGAGTTAAGAAAGCTTTTACAAGTTGGATTATCGGAAACT
TGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTGACTTTCAGAGA
ACAACTGGAACTTCTTAATAGCAATTATGAAACACTACAAAATAATGAAC
TATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATTATCGATT
TTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATCATGCTGA
TTTTGTCGAGATTTTCAAACATAAATTTTGTTGACTGGATGATTGGTACA
TACATGGataatttttaataaaagtcTATTCCGTACTTTTTCTAACATTG
CTATTGAGGGGTAAAGGATGCAGCTAAAAGTAATACTTCGTtggaaaaga
taattttgagtagTTTGATGTAAGGATGCAAGCTTTGTTTGTAGGTTGCT
GAActtgaataatttgaaaatgaagaagaaaaaattgggATTTTTTAACT
CGGTCAACAACTTTTAAATatatacttttttcaaaaactttggatccCAT
TGATGATTCTAAATATGTATTCTTCAGATTTTTTCACTTCACAACATTTT
TCGTTACCGATACCGCTCGTTTCATGGATCATTGATGCCATCATTGGctg
gatttttagaaaatttgatatACGTTATGaaaatcatagtcattataaaa
aatcccggtctggaaggctttaGTTTCTTGCTATTACTAACAGTTAAAGC
TTGCATATCTtaaattgatttgttttgcataccttttgatcatgtgatta
taAAATTAACCAATCTCAAGAGCTGAaatggtaacgtgatcaaaaagtat
gcaaatcgcaaca
Run BLAST on NCBI

protein sequence of TCONS_00013390-protein

>TCONS_00013390-protein ID=TCONS_00013390-protein|Name=TCONS_00013390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=527bp
ISVKVNRIVNLSYQFIISAIRNFSRMKTFGYVSLWMILILVYLSNIVKSE
DVSKSLILTSVQNKEQSGKTPSITSSTKFDHVIDQALLESELNKVDEEFN
RIQKLITIWEKNLRVLYSKEELQDILKQDLTTIQTETSTLEHDLIILSEK
SISLKDLIPKNANKAIKKKIKQLKKTIQKELQKGLVRLINDFECKLKERC
SQDSLKEAESSFFSKVNDIGEVHEQCDDFTQECVDSYKEILNKFDDYTKD
HVSPLKTQLHDLKKSKCSQSKTIRKTLESRLKSLEKKVQHWIETILSKLK
ELIEQKLTQLSDGSKYNFDVLNGLRLDSKDKKKDPDALQEIKTKMVNLKQ
TSVQNYNEFNQVYQYLFEFKHLLADNEKQFKKYFEIVTKLRYVIIGFQAQ
IDEYLTVLLRKIKMASFEIDSEEFDKKLEDFLLMFEEELRKLLQVGLSET
CSKLNEFETTFDVTFREQLELLNSNYETLQNNELSSEDLDQAYFDTKLSI
LSKKFEKLTRNNQYHADFVEIFKHKFC
Run BLAST on NCBI

transcript from alignment at sc0000167:318573..324530+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013390 ID=TCONS_00013390|Name=TCONS_00013390|organism=Clytia hemisphaerica|type=transcript|length=5958bp|location=Sequence derived from alignment at sc0000167:318573..324530+ (Clytia hemisphaerica)
ATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATTAT ATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTT TATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAA GATGTATCTAAATCACGTAAGTTGTTAGGTATTTATTCAAGTCACAATTT TAATCTTGGTCTTCGTTGAAGTCTTTATTCCATGTGCTCTAATCAGATCG ATTTGTCGCGTTATATATTTACATGGAATTTGTCATATGTGCATCTAAAA TTTAGAAGTGGTTTTCttccaattttaagaaaattggtGTATTTATTCAA GTCACAATTTTAATCTTGGTCTTCGTTGAAGTCTTTATTCCATGTGCTCT AATCAGATCGATTTGTCGCGTTATATATTTACATGGAATTTGTCATATGT GCATCTAAAATTTAGAAGTGGTTTTCttccaattttaagaaaattggtGT ATTTATTCAAGTCACAATTTTAATCTTGGTCTTCGTTGAAGTCTTTATTC CATGTGCTCTAATCAGATCGATTTGTCGCGTTATATATTTACATGGAATT TGTCATATGTGCATCTAAAATTTAGAAGTGGTTTTCTTCCAATGAAGCTT GGTACTcacgtattaaaaaaaaagtggtgTTTAACACTTTTTGCGTGCGT TTAACACTAGACTCGTGCGACTTTGGGAAAAACATCCAAATGTACAAGAG TAATTATGTGAACTTAGTCCAGTACCATCTCTAGGTGTGGACACTATCAt tcattttcattgatttcattTCAGTCATCCTTACATCTGTGCAAAACAAG GAACAATCTGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCA TGTGATCGATCAAGGTAAACTTATGCAACCCTAATAAATACATCCTCGCG ACTTTTGTTTAACAAATTGCTTActttcgggtacctaataagtgGGGGGG GAGTGGAAAagttctcaaaacttaataagcgggaggAGGGGGCTGGAAAA GAAATGTCCTtggtggaaatttttttgaaaaggagcAGAATTAGAGCAAA AGAGAGACCTTTtattttaaagacatttttctaaaaattgataAACGGGG AGAGGTTGAAATAAGAATATCCTGGGTTGtaaaattttcgagaaattaaT AAGCTAGGGGGACGCTCaataggtacccgagagtagactGTTCGAACATG CACGGGaacaaatttgttcaaattaagGAAAATTTCGAATAATGGAGATT TGTTCATAAAGCATTGTTATTAATGGAACAGAAAACATGTTTGAGTTGAG GAggcattcgagttaaagagaatcTAGTTTTGAAGCGCCGAGACAAAAAA CGGGCGTGAGTTGAACAAGATGGGAGGCTGATATATAGGCCTCGAAAAAA CTTAGTAAACACTGTTACCCCTTTTCACGGATCTtgtaatgtttcaaaat ttctactCTCTATCACTGTTCCAATatcatttgctttttattttcataGC ATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATTTAACCGTATAC AAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGGTATGTTATATTTC TAAGTTCTAGTCCATCATTTAAATCATATCAGTATTACCTTATTAGTAGG GGGCTAGAAATACAGCCGCTTCAAGTTCAAAAGCATACTGACCTCAGTAC tatcaagacaagatttgacgtcaaatcacagtagagctgacagttagttg gtcttaaagcgACTGTAttcctttgtgtgttttagtcagagagttgttgt aatacaattttttgctcagaatttcattctctatcagatggtaccaatca ttttcgtttattttgacttttgaaaataagctattcctctaccccttatt ttcccttgcagttttgccaatggcgtcactattttggtcataaaaagttt tcccgggcctaatccgcgtcctccctctcaaaaatatcttgtaatatact gttcttttgaatagactaaaaatggctaggtcgtagaaaagatgtcacag aaccccaggcttggccccctactatatcggagtttttgatttttctaaaa aaagcgatgcattgtgggattgtttcgagtgtattacaatagaattccct cgaggaattcctaagagatttctattgtaatacactcgaaacaatcccac aatgcatcgcttttttagaaaaatcaaaaactccgataaggtctattata caagaagttgatttctttctttcttcttctgtTTGTTTCGGTACaatata ttgagacagactttatttGTATTCATTCTGGTTAGCTTcgtgtaagtaag taagtctgcgaccgcagtcggtgGCGagccgaaggctcctctttcgatag ctatctacccgaaggtaggggaagacgtcactctttctccctggattgct ccacttacccttgactcTTCTCTTAATaatgctgagcatcaagcagagag gcatgaaataccattttggaaatctttggtataacccggctgggggttga acccacaaccttgcaaaCTGTAGCTGGATATCGTactacttcgaataaac gccccatTTTTTTAAACCTCCccttgaataaacgcccctttttGAGAAAA GACTTTGGATGAGTGCCCCCTCCCGCTCGATTAAAAGCCCTTcctcaaaa ccaaaacaaaaattgataaatgtcCGGGATGTTTATTTGATGTTTGACTG GAAAAGTTCATGACAAATACACAATATAAGAAAGATTTACCTTTCGATAT CCATTTTAGTCTTATACAGCAAAGAAGAACTCCAGGACATCCTAAAGCAA GACCTCACTACGATACAAACAGAAACCAGCACATTGGAGCATGATCTTAT TATTCTATCagaaaaatcaatatcattAAAAGACTTGATACCCAAAAATG CCAACAAAGCTATCAAGAAAAAGATTAAGCAACTCAAGAAGACCATTCAG AAAGAACTTCAGAAAGGCTTGGTAAGACTGATTAACGATTTTGAATGCAA GTTGAAAGAGAGATGTTCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGT TTTTCAGTAAAGTTAACGATATTGGAGAAGTCCATGAGCAATGTGATGGT ACGTAAGCGTCTTGTTTTAGCCTCTTTTGTTTCTACGTTCGAGAGGATTA AAAAGTTTTGTCAAAGTgcaattttatcaaaagaaactgaccaaaatttc aaggggTTAACAAATTATTCCTTAGTAAGATTTTGCAGAATAATTACTGT GACAGGGATCTATGGATCACATTGCATGAGCTTGAAATTTGTACGAATCT ATTTCCACCAAGCCAGGTTGGGTGTTCCTATTTTAGTTTCTTCTTTATCT TAACCTTTATAGATTTCACTCAGGAGTGTGTGGACAGCTACAAGGAGATT TTAAACAAATTTGACGACTATACTAAAGACCATGTCAGCCCATTAAAAAC CCAACTTCATGatctcaaaaaatcaaaatgtagtCAATCAAAAACAATTC GTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACAACAT TGGATTGAGACCATTTTATCAAAACTCAAGGAATTGATTGAACAAAAGCT GACACAGCTTAGTGATGGTTCTAAATacaattttgatgttttgaatgGAC TGAGACTTGATTCGAAAGgtatttgatcatttttaacTTAACTGAGAGCC AATTTATTAATACAAATCTTCATTCTTCATTTATGGGTCAAAATAATGTC TAAACCCTAAAATGACACATTTCAGGATAGCATTCAGGACtgataatcaa ataaatttatatatCCTTTCTCAATACTCCAATCATATATTTCAAACCTT TTCTTGTTAACCAAAATGAAAGGAAATCTCATTTGTTGAAGTTGAATCCA GGTCACTCCTATATCATTGGGATGAAATAGTAGTTCTAGGATACACCTGT ATTGATCGCAATGTGATGGTCACGGTTCGGCTGTTGTCCTGATGCAGATG AATATAAAGTGTATTATATTTCTTCCGTTTAGATAAGAAAAAGGATCCTG ATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCA GTACAAAATTATAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATT TAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaaaatatttcgaaa tagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGAT GAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGAT TGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTG AAGAAGAGTTAAGAAAGCTTTTACAAGGTAATTTCATGTTCATCCATCAA TCATATAATCCCAAAAATCTTAATTTGATACTTTAGAACCTTTATAGTAA CACTGACTGTTACTGACCAGTAGTGTGGTAGCAGGGGGGAGCAACTCcca aaaaaattgcttttttacaTCCTAAAATTAgcagttttcagccaaaaaga tgaaaaaaattatttcgctCGCGTGATTGTCacacaaatattttaatttt tacttttaatatGGGGCGCCAAAACAACAACTTTGGAAAATTGCTTCCCT AGTTTGCCTACTCTGAATCGCAGACCGAAGGTAGTATAGTttatgctctc taattcgacgttctactattcgataggctcccttgttcgatgaaatttaa agtcctcgtcaacaagaaactctcataaacgacgctcccttatacGATAG GCTCCCttgttcgatgaaatttaaagtcctcgtcaacaagaaactctcat aaacgacgctcccttatacGATAAGCTCCCTTGTTCcatgaaaatccgat tccccttCAGGACAAATTCGTCAGTGGATACAATCAGTCTTATAGTTTGC CCCAATTTTGGTTGATCCACCACGCTACTGTAAGCTCTTTTTCACCAAGC GCTCATTTTTTACTTTCTCCATTTTTAGTTGGATTATCGGAAACTTGTTC CAAACTGAACGAATTCGAAACGACATTTGACGTGACTTTCAGAGAACAAC TGGAACTTCTTAATAGCAATTATGAAACACTACAAAATAATGAACTATCG TCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATTATCGATTTTGAG CAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATCATGCTGATTTTG TCGAGATTTTCAAACATAAATTTTGTTGACTGGATGATTGGTACATACAT GGataatttttaataaaagtcTATTCCGTACTTTTTCTAACATTGCTATT GAGGGGTAAAGGATGCAGCTAAAAGTAATACTTCGTtggaaaagataatt ttgagtagTTTGATGTAAGGATGCAAGCTTTGTTTGTAGGTTGCTGAAct tgaataatttgaaaatgaagaagaaaaaattgggATTTTTTAACTCGGTC AACAACTTTTAAATatatacttttttcaaaaactttggatccCATTGATG ATTCTAAATATGTATTCTTCAGATTTTTTCACTTCACAACATTTTTCGTT ACCGATACCGCTCGTTTCATGGATCATTGATGCCATCATTGGctggattt ttagaaaatttgatatACGTTATGaaaatcatagtcattataaaaaatcc cggtctggaaggctttaGTTTCTTGCTATTACTAACAGTTAAAGCTTGCA TATCTtaaattgatttgttttgcataccttttgatcatgtgattataAAA TTAACCAATCTCAAGAGCTGAaatggtaacgtgatcaaaaagtatgcaaa tcgcaaca

Coding sequence (CDS) from alignment at sc0000167:318573..324530+

>TCONS_00013390 ID=TCONS_00013390|Name=TCONS_00013390|organism=Clytia hemisphaerica|type=CDS|length=11088bp|location=Sequence derived from alignment at sc0000167:318573..324530+ (Clytia hemisphaerica)
ATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATTAT
ATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTT
TATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAA
GATGTATCTAAATCACTCATCCTTACATCTGTGCAAAACAAGGAACAATC
TGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATGTGATCG
ATCAAGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATTTAAC
CGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGTCTTATA
CAGCAAAGAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTACGATAC
AAACAGAAACCAGCACATTGGAGCATGATCTTATTATTCTATCagaaaaa
tcaatatcattAAAAGACTTGATACCCAAAAATGCCAACAAAGCTATCAA
GAAAAAGATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTCAGAAAG
GCTTGGTAAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAGAGATGT
TCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAAAGTTAA
CGATATTGGAGAAGTCCATGAGCAATGTGATGATTTCACTCAGGAGTGTG
TGGACAGCTACAAGGAGATTTTAAACAAATTTGACGACTATACTAAAGAC
CATGTCAGCCCATTAAAAACCCAACTTCATGatctcaaaaaatcaaaatg
tagtCAATCAAAAACAATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTT
TGGAAAAGAAAGTACAACATTGGATTGAGACCATTTTATCAAAACTCAAG
GAATTGATTGAACAAAAGCTGACACAGCTTAGTGATGGTTCTAAATacaa
ttttgatgttttgaatgGACTGAGACTTGATTCGAAAGATAAGAAAAAGG
ATCCTGATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTAAAGCAA
ACATCAGTACAAAATTATAACGAGTTCAACCAAGTCTATCAATACTTGTT
CGAATTTAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaaaatatt
tcgaaatagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAAGCACAG
ATCGATGAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGCATCATT
TGAGATTGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCTTGTTGA
TGTTTGAAGAAGAGTTAAGAAAGCTTTTACAAGTTGGATTATCGGAAACT
TGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTGACTTTCAGAGA
ACAACTGGAACTTCTTAATAGCAATTATGAAACACTACAAAATAATGAAC
TATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATTATCGATT
TTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATCATGCTGA
TTTTGTCGAGATTTTCAAACATAAATTTTGTTGAATAAGTGTAAAGGTGA
ATCGCATTGTCAATCTAAGTTATCAATTCATTATATCAGCTATTAGGAAC
TTTTCGAGAATGAAGACTTTTGGATATGTTTCTTTATGGATGATCCTTAT
TTTAGTTTATCTTTCAAATATTGTGAAATCTGAAGATGTATCTAAATCAC
TCATCCTTACATCTGTGCAAAACAAGGAACAATCTGGGAAGACACCATCG
ATAACTTCTTCAACCAAGTTCGACCATGTGATCGATCAAGCATTACTTGA
AAGTGAATTAAACAAAGTTGATGAAGAATTTAACCGTATACAAAAATTGA
TCACAATTTGGGAAAAGAACTTAAGAGTCTTATACAGCAAAGAAGAACTC
CAGGACATCCTAAAGCAAGACCTCACTACGATACAAACAGAAACCAGCAC
ATTGGAGCATGATCTTATTATTCTATCagaaaaatcaatatcattAAAAG
ACTTGATACCCAAAAATGCCAACAAAGCTATCAAGAAAAAGATTAAGCAA
CTCAAGAAGACCATTCAGAAAGAACTTCAGAAAGGCTTGGTAAGACTGAT
TAACGATTTTGAATGCAAGTTGAAAGAGAGATGTTCTCAAGATAGTCTTA
AAGAAGCAGAATCGTCGTTTTTCAGTAAAGTTAACGATATTGGAGAAGTC
CATGAGCAATGTGATGATTTCACTCAGGAGTGTGTGGACAGCTACAAGGA
GATTTTAAACAAATTTGACGACTATACTAAAGACCATGTCAGCCCATTAA
AAACCCAACTTCATGatctcaaaaaatcaaaatgtagtCAATCAAAAACA
ATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACA
ACATTGGATTGAGACCATTTTATCAAAACTCAAGGAATTGATTGAACAAA
AGCTGACACAGCTTAGTGATGGTTCTAAATacaattttgatgttttgaat
gGACTGAGACTTGATTCGAAAGATAAGAAAAAGGATCCTGATGCCCTTCA
AGAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCAGTACAAAATT
ATAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATTTAAGCATCTA
TTGGCAGACAATGAAAAAcagttcaaaaaatatttcgaaatagTTACCAA
ACTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGATGAATATTTAA
CAGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGATTGATTCTGAA
GAATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTGAAGAAGAGTT
AAGAAAGCTTTTACAAGTTGGATTATCGGAAACTTGTTCCAAACTGAACG
AATTCGAAACGACATTTGACGTGACTTTCAGAGAACAACTGGAACTTCTT
AATAGCAATTATGAAACACTACAAAATAATGAACTATCGTCAGAAGACCT
TGACCAGGCTTATTTTGACACGAAATTATCGATTTTGAGCAAAAAGTTCG
AAAAATTAACTCGAAATAATCAATATCATGCTGATTTTGTCGAGATTTTC
AAACATAAATTTTGTTGAATAAGTGTAAAGGTGAATCGCATTGTCAATCT
AAGTTATCAATTCATTATATCAGCTATTAGGAACTTTTCGAGAATGAAGA
CTTTTGGATATGTTTCTTTATGGATGATCCTTATTTTAGTTTATCTTTCA
AATATTGTGAAATCTGAAGATGTATCTAAATCACTCATCCTTACATCTGT
GCAAAACAAGGAACAATCTGGGAAGACACCATCGATAACTTCTTCAACCA
AGTTCGACCATGTGATCGATCAAGCATTACTTGAAAGTGAATTAAACAAA
GTTGATGAAGAATTTAACCGTATACAAAAATTGATCACAATTTGGGAAAA
GAACTTAAGAGTCTTATACAGCAAAGAAGAACTCCAGGACATCCTAAAGC
AAGACCTCACTACGATACAAACAGAAACCAGCACATTGGAGCATGATCTT
ATTATTCTATCagaaaaatcaatatcattAAAAGACTTGATACCCAAAAA
TGCCAACAAAGCTATCAAGAAAAAGATTAAGCAACTCAAGAAGACCATTC
AGAAAGAACTTCAGAAAGGCTTGGTAAGACTGATTAACGATTTTGAATGC
AAGTTGAAAGAGAGATGTTCTCAAGATAGTCTTAAAGAAGCAGAATCGTC
GTTTTTCAGTAAAGTTAACGATATTGGAGAAGTCCATGAGCAATGTGATG
ATTTCACTCAGGAGTGTGTGGACAGCTACAAGGAGATTTTAAACAAATTT
GACGACTATACTAAAGACCATGTCAGCCCATTAAAAACCCAACTTCATGa
tctcaaaaaatcaaaatgtagtCAATCAAAAACAATTCGTAAAACTTTGG
AAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACAACATTGGATTGAGACC
ATTTTATCAAAACTCAAGGAATTGATTGAACAAAAGCTGACACAGCTTAG
TGATGGTTCTAAATacaattttgatgttttgaatgGACTGAGACTTGATT
CGAAAGATAAGAAAAAGGATCCTGATGCCCTTCAAGAAATTAAAACCAAA
ATGGTCAATCTAAAGCAAACATCAGTACAAAATTATAACGAGTTCAACCA
AGTCTATCAATACTTGTTCGAATTTAAGCATCTATTGGCAGACAATGAAA
AAcagttcaaaaaatatttcgaaatagTTACCAAACTTCGTTACGTGATC
ATTGGCTTCCAAGCACAGATCGATGAATATTTAACAGTTCTCTTGAGGAA
AATTAAAATGGCATCATTTGAGATTGATTCTGAAGAATTCGATAAAAAGT
TGGAGGACTTCTTGTTGATGTTTGAAGAAGAGTTAAGAAAGCTTTTACAA
GTTGGATTATCGGAAACTTGTTCCAAACTGAACGAATTCGAAACGACATT
TGACGTGACTTTCAGAGAACAACTGGAACTTCTTAATAGCAATTATGAAA
CACTACAAAATAATGAACTATCGTCAGAAGACCTTGACCAGGCTTATTTT
GACACGAAATTATCGATTTTGAGCAAAAAGTTCGAAAAATTAACTCGAAA
TAATCAATATCATGCTGATTTTGTCGAGATTTTCAAACATAAATTTTGTT
GAATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATT
ATATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTC
TTTATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTG
AAGATGTATCTAAATCACTCATCCTTACATCTGTGCAAAACAAGGAACAA
TCTGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATGTGAT
CGATCAAGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATTTA
ACCGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGTCTTA
TACAGCAAAGAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTACGAT
ACAAACAGAAACCAGCACATTGGAGCATGATCTTATTATTCTATCagaaa
aatcaatatcattAAAAGACTTGATACCCAAAAATGCCAACAAAGCTATC
AAGAAAAAGATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTCAGAA
AGGCTTGGTAAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAGAGAT
GTTCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAAAGTT
AACGATATTGGAGAAGTCCATGAGCAATGTGATGATTTCACTCAGGAGTG
TGTGGACAGCTACAAGGAGATTTTAAACAAATTTGACGACTATACTAAAG
ACCATGTCAGCCCATTAAAAACCCAACTTCATGatctcaaaaaatcaaaa
tgtagtCAATCAAAAACAATTCGTAAAACTTTGGAAAGTCGTTTGAAATC
TTTGGAAAAGAAAGTACAACATTGGATTGAGACCATTTTATCAAAACTCA
AGGAATTGATTGAACAAAAGCTGACACAGCTTAGTGATGGTTCTAAATac
aattttgatgttttgaatgGACTGAGACTTGATTCGAAAGATAAGAAAAA
GGATCCTGATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTAAAGC
AAACATCAGTACAAAATTATAACGAGTTCAACCAAGTCTATCAATACTTG
TTCGAATTTAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaaaata
tttcgaaatagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAAGCAC
AGATCGATGAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGCATCA
TTTGAGATTGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCTTGTT
GATGTTTGAAGAAGAGTTAAGAAAGCTTTTACAAGTTGGATTATCGGAAA
CTTGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTGACTTTCAGA
GAACAACTGGAACTTCTTAATAGCAATTATGAAACACTACAAAATAATGA
ACTATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATTATCGA
TTTTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATCATGCT
GATTTTGTCGAGATTTTCAAACATAAATTTTGTTGAATAAGTGTAAAGGT
GAATCGCATTGTCAATCTAAGTTATCAATTCATTATATCAGCTATTAGGA
ACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTTTATGGATGATCCTT
ATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAAGATGTATCTAAATC
ACTCATCCTTACATCTGTGCAAAACAAGGAACAATCTGGGAAGACACCAT
CGATAACTTCTTCAACCAAGTTCGACCATGTGATCGATCAAGCATTACTT
GAAAGTGAATTAAACAAAGTTGATGAAGAATTTAACCGTATACAAAAATT
GATCACAATTTGGGAAAAGAACTTAAGAGTCTTATACAGCAAAGAAGAAC
TCCAGGACATCCTAAAGCAAGACCTCACTACGATACAAACAGAAACCAGC
ACATTGGAGCATGATCTTATTATTCTATCagaaaaatcaatatcattAAA
AGACTTGATACCCAAAAATGCCAACAAAGCTATCAAGAAAAAGATTAAGC
AACTCAAGAAGACCATTCAGAAAGAACTTCAGAAAGGCTTGGTAAGACTG
ATTAACGATTTTGAATGCAAGTTGAAAGAGAGATGTTCTCAAGATAGTCT
TAAAGAAGCAGAATCGTCGTTTTTCAGTAAAGTTAACGATATTGGAGAAG
TCCATGAGCAATGTGATGATTTCACTCAGGAGTGTGTGGACAGCTACAAG
GAGATTTTAAACAAATTTGACGACTATACTAAAGACCATGTCAGCCCATT
AAAAACCCAACTTCATGatctcaaaaaatcaaaatgtagtCAATCAAAAA
CAATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTA
CAACATTGGATTGAGACCATTTTATCAAAACTCAAGGAATTGATTGAACA
AAAGCTGACACAGCTTAGTGATGGTTCTAAATacaattttgatgttttga
atgGACTGAGACTTGATTCGAAAGATAAGAAAAAGGATCCTGATGCCCTT
CAAGAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCAGTACAAAA
TTATAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATTTAAGCATC
TATTGGCAGACAATGAAAAAcagttcaaaaaatatttcgaaatagTTACC
AAACTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGATGAATATTT
AACAGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGATTGATTCTG
AAGAATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTGAAGAAGAG
TTAAGAAAGCTTTTACAAGTTGGATTATCGGAAACTTGTTCCAAACTGAA
CGAATTCGAAACGACATTTGACGTGACTTTCAGAGAACAACTGGAACTTC
TTAATAGCAATTATGAAACACTACAAAATAATGAACTATCGTCAGAAGAC
CTTGACCAGGCTTATTTTGACACGAAATTATCGATTTTGAGCAAAAAGTT
CGAAAAATTAACTCGAAATAATCAATATCATGCTGATTTTGTCGAGATTT
TCAAACATAAATTTTGTTGAATAAGTGTAAAGGTGAATCGCATTGTCAAT
CTAAGTTATCAATTCATTATATCAGCTATTAGGAACTTTTCGAGAATGAA
GACTTTTGGATATGTTTCTTTATGGATGATCCTTATTTTAGTTTATCTTT
CAAATATTGTGAAATCTGAAGATGTATCTAAATCACTCATCCTTACATCT
GTGCAAAACAAGGAACAATCTGGGAAGACACCATCGATAACTTCTTCAAC
CAAGTTCGACCATGTGATCGATCAAGCATTACTTGAAAGTGAATTAAACA
AAGTTGATGAAGAATTTAACCGTATACAAAAATTGATCACAATTTGGGAA
AAGAACTTAAGAGTCTTATACAGCAAAGAAGAACTCCAGGACATCCTAAA
GCAAGACCTCACTACGATACAAACAGAAACCAGCACATTGGAGCATGATC
TTATTATTCTATCagaaaaatcaatatcattAAAAGACTTGATACCCAAA
AATGCCAACAAAGCTATCAAGAAAAAGATTAAGCAACTCAAGAAGACCAT
TCAGAAAGAACTTCAGAAAGGCTTGGTAAGACTGATTAACGATTTTGAAT
GCAAGTTGAAAGAGAGATGTTCTCAAGATAGTCTTAAAGAAGCAGAATCG
TCGTTTTTCAGTAAAGTTAACGATATTGGAGAAGTCCATGAGCAATGTGA
TGATTTCACTCAGGAGTGTGTGGACAGCTACAAGGAGATTTTAAACAAAT
TTGACGACTATACTAAAGACCATGTCAGCCCATTAAAAACCCAACTTCAT
GatctcaaaaaatcaaaatgtagtCAATCAAAAACAATTCGTAAAACTTT
GGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACAACATTGGATTGAGA
CCATTTTATCAAAACTCAAGGAATTGATTGAACAAAAGCTGACACAGCTT
AGTGATGGTTCTAAATacaattttgatgttttgaatgGACTGAGACTTGA
TTCGAAAGATAAGAAAAAGGATCCTGATGCCCTTCAAGAAATTAAAACCA
AAATGGTCAATCTAAAGCAAACATCAGTACAAAATTATAACGAGTTCAAC
CAAGTCTATCAATACTTGTTCGAATTTAAGCATCTATTGGCAGACAATGA
AAAAcagttcaaaaaatatttcgaaatagTTACCAAACTTCGTTACGTGA
TCATTGGCTTCCAAGCACAGATCGATGAATATTTAACAGTTCTCTTGAGG
AAAATTAAAATGGCATCATTTGAGATTGATTCTGAAGAATTCGATAAAAA
GTTGGAGGACTTCTTGTTGATGTTTGAAGAAGAGTTAAGAAAGCTTTTAC
AAGTTGGATTATCGGAAACTTGTTCCAAACTGAACGAATTCGAAACGACA
TTTGACGTGACTTTCAGAGAACAACTGGAACTTCTTAATAGCAATTATGA
AACACTACAAAATAATGAACTATCGTCAGAAGACCTTGACCAGGCTTATT
TTGACACGAAATTATCGATTTTGAGCAAAAAGTTCGAAAAATTAACTCGA
AATAATCAATATCATGCTGATTTTGTCGAGATTTTCAAACATAAATTTTG
TTGAATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCA
TTATATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTT
TCTTTATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATC
TGAAGATGTATCTAAATCACTCATCCTTACATCTGTGCAAAACAAGGAAC
AATCTGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATGTG
ATCGATCAAGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATT
TAACCGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGTCT
TATACAGCAAAGAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTACG
ATACAAACAGAAACCAGCACATTGGAGCATGATCTTATTATTCTATCaga
aaaatcaatatcattAAAAGACTTGATACCCAAAAATGCCAACAAAGCTA
TCAAGAAAAAGATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTCAG
AAAGGCTTGGTAAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAGAG
ATGTTCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAAAG
TTAACGATATTGGAGAAGTCCATGAGCAATGTGATGATTTCACTCAGGAG
TGTGTGGACAGCTACAAGGAGATTTTAAACAAATTTGACGACTATACTAA
AGACCATGTCAGCCCATTAAAAACCCAACTTCATGatctcaaaaaatcaa
aatgtagtCAATCAAAAACAATTCGTAAAACTTTGGAAAGTCGTTTGAAA
TCTTTGGAAAAGAAAGTACAACATTGGATTGAGACCATTTTATCAAAACT
CAAGGAATTGATTGAACAAAAGCTGACACAGCTTAGTGATGGTTCTAAAT
acaattttgatgttttgaatgGACTGAGACTTGATTCGAAAGATAAGAAA
AAGGATCCTGATGCCCTTCAAGAAATTAAAACCAAAATGGTCAATCTAAA
GCAAACATCAGTACAAAATTATAACGAGTTCAACCAAGTCTATCAATACT
TGTTCGAATTTAAGCATCTATTGGCAGACAATGAAAAAcagttcaaaaaa
tatttcgaaatagTTACCAAACTTCGTTACGTGATCATTGGCTTCCAAGC
ACAGATCGATGAATATTTAACAGTTCTCTTGAGGAAAATTAAAATGGCAT
CATTTGAGATTGATTCTGAAGAATTCGATAAAAAGTTGGAGGACTTCTTG
TTGATGTTTGAAGAAGAGTTAAGAAAGCTTTTACAAGTTGGATTATCGGA
AACTTGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTGACTTTCA
GAGAACAACTGGAACTTCTTAATAGCAATTATGAAACACTACAAAATAAT
GAACTATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGAAATTATC
GATTTTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAATATCATG
CTGATTTTGTCGAGATTTTCAAACATAAATTTTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007482XLOC_007482Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013390-exon-sc0000167-1491911889:318573..318738TCONS_00013390-exon-sc0000167-1491911889:318573..318738Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:318573..318738TCONS_00013390-exon-sc0000167-1510915933:318573..318738Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:318573..318738TCONS_00013390-exon-sc0000167-1575043694:318573..318738Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:319397..319486TCONS_00013390-exon-sc0000167-1491911889:319397..319486Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:319397..319486TCONS_00013390-exon-sc0000167-1510915933:319397..319486Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:319397..319486TCONS_00013390-exon-sc0000167-1575043694:319397..319486Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:320122..320208TCONS_00013390-exon-sc0000167-1491911889:320122..320208Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:320122..320208TCONS_00013390-exon-sc0000167-1510915933:320122..320208Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:320122..320208TCONS_00013390-exon-sc0000167-1575043694:320122..320208Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:321432..321770TCONS_00013390-exon-sc0000167-1491911889:321432..321770Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:321432..321770TCONS_00013390-exon-sc0000167-1510915933:321432..321770Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:321432..321770TCONS_00013390-exon-sc0000167-1575043694:321432..321770Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:322035..322340TCONS_00013390-exon-sc0000167-1491911889:322035..322340Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:322035..322340TCONS_00013390-exon-sc0000167-1510915933:322035..322340Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:322035..322340TCONS_00013390-exon-sc0000167-1575043694:322035..322340Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:322705..323049TCONS_00013390-exon-sc0000167-1491911889:322705..323049Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:322705..323049TCONS_00013390-exon-sc0000167-1510915933:322705..323049Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:322705..323049TCONS_00013390-exon-sc0000167-1575043694:322705..323049Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1491911889:323701..324530TCONS_00013390-exon-sc0000167-1491911889:323701..324530Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1510915933:323701..324530TCONS_00013390-exon-sc0000167-1510915933:323701..324530Clytia hemisphaericaexon
TCONS_00013390-exon-sc0000167-1575043694:323701..324530TCONS_00013390-exon-sc0000167-1575043694:323701..324530Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013390-proteinTCONS_00013390-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:318573..324530 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.10668 0 0 0 0 0.420075 0.384913 0 0.00552171 0.966534 0 0.226788 0.166745 0 1.39867 1.3862 0 0.505692 0 0.585708 0.276259 0 0 0.780217 0 0.755494 0.811039 2.68302 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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