XLOC_007544 (gene) - C. hemisphaerica

Overview
NameXLOC_007544
Unique NameXLOC_007544
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000168:394444..398230-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007544 ID=XLOC_007544|Name=XLOC_007544|organism=Clytia hemisphaerica|type=gene|length=3787bp|location=Sequence derived from alignment at sc0000168:394444..398230- (Clytia hemisphaerica)
ACGTTAGCTAAGCTGTCTGCAATGCAACGATAATTTCTTCAGAAAGTAGG
CGAGTGAAAGTTTACGCTTTTTCGGGCGAGTAGAAACGCAGAGCTGTATC
GTTAGGGTAGTGATAGTCTTCGGTAAGTAACAAATTCAGATTTGAAAGTA
CGAGGCAGGGTAAATCCTCCCCGTGATCCTGTGTTTACTATCTTCGACAA
AAAGACATAACCCTCAGCCTCACGACGAAAGGTTTGTACCAACTTCCATT
CAGAAAATCTAAAAGTTGTGCGAGTGGCTCGGGGCGGGTACGAGATGGCC
CCTAGACTTACCGCACACTTCACTACCTAAATCTAAATAACGATTTCTTA
TATTTTAGAATTTATGGTGTCTAATCAGTTACTTTCAAGAGAAGTTCTGC
GAAACAGGAAATCACACATCCAACATGTTTACCTCATCAAGCGTATTTGA
AAATCACACAGTTGAATTGAGAGAAGATTACGTTGAAGTAAGAGAACAAC
CCTCTTTGCTTTCTTCTTACCTTCAACAGAATCAAATTGAAGTTGATAAT
GCGAGAGTACGAATGAACAGTAATCGCAATTTATACGGAAAACAATTCAA
AGCGAAGGAATTGTACGATGCTAAAGATAAAGGTAGGACCAATATTTTTT
ATTTTTCTCATTTCACAATATCATGGCTAAAAAATGGTTTACAGTAGCTA
TACGAAAAACTGTGAGCGCGGAAGTTGTGTGGGAAGGGAATCCCGCCCTG
GGAAGAATTTAGAATAAAACTTGACAACCGGAGCAACCCCTGGACCATCT
CCCAACCATCTATTTCAAAGCTCCGAAGGGGCTAGATGCAAACCTCCAGG
GTGGGAAATGAAGCCACTCTATTTCCCATCCAAAAAACGTAACCCGCGTG
TTTTTTAAACAAAATTTCTAAATCTGGGGCAAACCTAAGGCTTCACTTTT
CCTTACTCGAGAAAGGTTGAAGATTCTTCTCTAGCCCCTCGGGGCTTCAA
ACTCAATCCTCCCAACTTGTCTCTCTCACCACGAGATATAGTAAATGGCT
AGATAAAACAACTTTTATAGAAAAGCTCTTGTTTTTCATTTACAGAAATT
ACGAACGCAATCGCAGATAACGTGGCGATCCAAGATAAATTGGCAATGAT
TGGGAAGGAAGGTTCCTTGAAAGCTAAAGTGAGAAAGCAAGAAAAAGAGT
TAAAACATGCTCGCAAAGAACGCATCTACTATGAAAATATGGTCAAACAA
AAGGACTACGCTATCAAACGTATACAAGCGAATCACGAAGAAAGAAAAAT
GGCTATACTGGATAAAATTAGAGCTAAAGATGAGGAAATCCAGCAATTGC
GAAGGGAAATTGAGGTCCAACAAGTTGAACATGAAGCCAAAACTTTCCTC
ACCAACCCGTCCAAGAAGAAAAAGATGAAGCGATAATATTTGTGAAGTTT
TGCAGCAATCAATTTATAGACCTATCTTTCATTTTTAAATACATATAACT
GTTTTTAACTATGCGTAAAAATGTAAAAATCAATAAATATATCATATATT
CTATAAAAATCTCCACAATATAAAATGGATAAACTCAATTATCTCAAAGA
TCTAAGGAAATTTGAAATAGCTTCAAAATGAATGGAGAAGCAATTATTGG
CACCCCTATGTGACTGAACCGGTAGCTAAACTTCGTGTATCTTTGAAGAT
GAAAGGTATTTGTAAGGTGTGGGCAAGTTTATTTATCATTTCACGGACTA
AGCTTCTAAAAAAGTGGGTTGGTCGGTGTAAAAAATTGTAGAAGGCTATG
AAAACTAAGAAACAGTCATCGAGTTATTAAAAATTGGCAGTCGAGAATTA
ATTTGTTTTAACTCCGGTTATGCAAATTTAAGGTTCGGTCGGGCCAGAAT
ATACAACTGATTGAATTTGTAGAAAAGTGTAGAAACACGAAAGATGCTCT
TAATTAGCCCGGTTACTACTTACCTATCGCAGTCCAAATAATGTGCAGTT
GACGCTTTAAGGCTAAATATTGGGAATAGTAGTCCATCCCAATCTCTCAT
TTAATCAGTTTTGAAGGAAACATTGAAAAACACATATCCTCAAGACATTC
TGATAAATGTGATCTCATTTCTCCTTCGTTGAAAATCATATTTCTCGCCT
CGATATCAAAAGCAAATGAGACACAGTATGCAATAGAATGCAAACAACAG
TTCCTCATGTGTTCATCCGGGTTTTCTTCAGGGCGTTCAATAAATAATAT
ATTATCCCCTATCCCACTTTCGTTTATCGTTTTCAAAACTTGTTGTATGA
TTGAAGCTTTTGAGCTTACTGTACAACAAAAGATATGAATGTTTCGACCA
ATACGAGCTGATGTTGCCCAATGTCCTTCGACTCGATGTAATTGCAAGAC
TTTCTTGTCTGAACCGAAAATTTCAGTCGGATTTAGCGCTTCTAACAACT
CTGGATCAGCGAATCCAGTCACGTCATGGAATTGATGACGTAGTATCTTT
TGTACGCACCGGATGATATCCATTGATAAGATATCGTTGTTTAAAATCAA
TTCTTGGTGGTGCCTGTACAATTTAATGTCAAGTTCGGGATCATCCAACC
AAACTTCAGATTCAGGAGATGTATTCGAGGTCTCAACTGTGTCAATAGAG
GGCCTCTCTTCGTCTGGTATCTTTTTCTTAGCTTCTGGCTCATTTCCAGC
TTTAATCGGTCCAGTAGAATCGTTGATTTTTCGTTTTTCACCAATATTGG
GTTGTTCATCTGTTGGCATCTTTGAGAGTTCCAAATCAACATCATTCAAG
ACAAATTGTAAATCTAGTTTCACTTTCTGTAACATGTCTCTATCGTCGAC
TTTTTTTATCACATTTGTTAGTTCTTGGCAAACATTTTCACATGTGTTCA
AAATAGCTCCTTCTCCTTTATCCTCGCTAAGTTTATTTTGCGTTTCTCCC
GATTGTTGTGTTTCTGGAGATGTCGTTTGTGTTGATTGATCACCATCACG
CACTATTACATTCCGGTTCGCCAGAAATTCGATGGTAGTTCTGTTAACAA
CCGGTAAAGGTAACACGACCTGTTTTGGAGGCATGACAAGTGGTAACAAT
TTGTTTACAGAGAGATTTGTAGTATCTTCTACTATAATTTCTTGCTCGAT
TTTCTTACTTGCGAGTCCTTTCTGTTTGTGAGTAGCATGAGATGGTGCTT
GGATGCTAATGAAAAGATTCTGTTCAACTTGCTCCTTATCGAAACAATCG
AAATCTAACGTGAACAGGGGGCTGTCGATGTAAAGCGAACTTAAAGTTTC
CCAGCCTTGGAATCCATGGAAAATAGCCACAAAATGAACACAAGGTAGTT
TATATTTCAACCAATCAATACAACCGCATGATGGAAAGTTCAATTCATCA
CCAAACGATACCGAGTAAGAAGCACTAGCCTCTTTTTTCTCTTGAACAAT
GAATTGTCCAGGCTGCACCTGACTAACGGTGTACTCCATCGATCCGGCTC
GCTGTATTTGTTCGTTCAAATGTCTTGCTACACAAGCAGGTTTATTGAGA
AGGTACAGAGACGTTGGAGATGGACTTTTAACTGGAGTTAAACATTGTTT
GCGATAGTCGAAAATGTTCTTCTCGATATAACTGAAATGTGAATGAAACA
CAAAATATGAAAGTGAGTCTGTGATTCTGGCATCCAAACTAACGGCAAGA
AAGCAATCATCCGCCATTCCGCCATAGCTAATTCTAATGAGAATTCATAT
TCAATATAATACTGTCAATTCTAACTGTTCTTCTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013511TCONS_00013511Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:394444..398230 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0.1	0	0.13	2.08	2.55	1.38	1.24	1.57	1.5	1.17	0.85	0.59	0.41	0	0.04	0	0.16	0	0.32	0.31	0.41	0	0	30.07	15.65	0	0	0	0