XLOC_007635 (gene) - C. hemisphaerica

Overview
NameXLOC_007635
Unique NameXLOC_007635
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000171:63337..69059+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007635 ID=XLOC_007635|Name=XLOC_007635|organism=Clytia hemisphaerica|type=gene|length=5723bp|location=Sequence derived from alignment at sc0000171:63337..69059+ (Clytia hemisphaerica)
GGAAGCACCCAACAACACCGACGAAACGAAGAAAGTGGACGAACAATGGC
TTCTTATCAATAAGAACGAAGATGAAGATCTACCTGTCAATCAATTCGAC
CtcactttcaaagaaaaacttaacAAACATGACTGCAAGGTAAAAATAAG
TGATCCGATTCCTGTCTGAGTTAAGTATATGAAGAAGATTTCTCCCTCTT
AAAATCCGGTCCAGTTTATTaactttgaaaacattttcagctGTTAACAG
AAAAGCCCGTTATTTTGCCTTAAATGAGCTGATTTCAGCTGATTAATTCT
TCTCTTGAGAAACAATTTTcgagaaatgcaaaaatttagTTTCCACCGAT
TAAGTagaaattcaattatttttccatAAATTCCAGGTCTTCATCAAAGC
CTCGTCGTCCATCGGTTTCATTGTCCGAGATATGGCACATGTCCGAGATT
TCAACATTTTCCAATGTATATACGCCGTCCTTCTATTCGGTGAAGCCAGT
AGCAACGGTGGTTTAAAATATAAAcacgaagaaaaaacaatctCACAGAT
AGAACAGGAGAAACGCCAAAACCCTCCGCCAAAACGCCCTACCAAGAAGA
ATTCACGGCGCCTTGCATCGCCTAACTCTGATCGAAGGCGGCAGGGCGGA
TCACAGGCGGATCAACCTCGTTCTGAAGATGAAATTGAGTTTGATGAGAA
CACGAGTAATATTTATGATGCAATCTCATTGCAGTTGTTGGATTTAATGT
ACGCACTTCATACGAAGGCATCTAAGATTTTAGGTAAGTGATGGATGTCC
TCCACACTCAATAGGTAATATAAGATTTATAAGCacaaacaaaataagaa
catgacgcttagatggccaaaatattaagaagaaGTTGTGAACATTTTAA
TGACACAATGACACCCCATTTCTCAGGAAACtgcacaaaaatactaaaaa
aatgttgaaattaagaacaatgtATTAAcattttagacttaaaactaaaa
aaagctGGAAACATCCTAAATCTTGTATCAATACTTTCAAAATTGCATAT
TTTTCAGagaacttttttgtttttcttttctaggAAATATGAATTGGTTG
GATTACAGTGAAAAACAAACTGCAGAAATCAAGATGAGGTGGAGCAGTAA
AGAAAGTCTGGATCAATTACCAAGTACCTTCAGAGGTTTATATAAATTTC
TATTTCTCATTTCCAACTTATTAGTTGGGAAAATCAGATGGTTTAAGATC
TATTGCCTATAATTTCCTCCCATGATCCTGGACTCTTTTCCAAAGTCAGG
GTATTCATCAACCtacaagtttttgacttttagcaaGATATTAGAATTTT
AACGTAAGAACCCATTTCTAGAAATTTCAAATCGTTATTTCTGGACTTTG
CAACGGATTATCTCTTTGACACTCATTGGTTTATTTCATTAGGTGACGTT
GACGATGAAATGTCGTTACTCTGGGTCAAATGCTGGTGTCCCTTGCTCCA
AGGTATCGCACGCCTCGCTTGTGATATTCGACGAGACATCCGAATGAACG
CGCTTACCGTCTTGCAGCGCTCTCTTCTGGCGGAGGATTTACATAAGCTG
GCGGCCTCTGAATGGGAGAATTGTTTTAATCAGGTAAGATGGTTGAAAAA
TGCATTTCTAATTTTCTGAGATCgattttaaatctctttgaaaaCCTGGT
CAGCGATGAATTAATTTGTATTTTGAGCAGTTCATGATCTAAAGCAGTTA
AAATGATCTAAAGAAACTGAGAGAATTTGATTTAGTAAACAAACTGTGAT
CTCTTATTTTAAAGATGTCTATTGTTAACCAAGTTAAGAATTGTGGCAAA
TTCCAAATTCAACTTactttgtgattttttaaaGGTGTTATTCCCAATGC
TGGCAAGCTTGTTAGAAATCCCAGGGGAATTGGATCCTACTGGAATTGAA
GAGACTCGTATGAGGGCGGCCACCCTTTTATGCAAGGTAAAGGCTCATTT
CATTGTCTGGactcatgatattcatgatgtaatgtttttatGTGGAAGTA
CCAAGAATAGGCATGGCGTTAGCTTTATTGTTTAGATTCAAAATCAGCGG
CAAACACAcggtttttttttgtcttatgTAATGAAAATCAGGAATTAAAT
GTTTAAAGAATGCTTTCCTTTTCAACTCAGAAATTTGAACTGATTTCTAA
ATATTCTACTTTCTCTCCTTCCCAGGCCTTCTTACAGCATTTGAATACAT
TGGTATCCTTGGCAACGTTTACAGCATTATGGATGACCATTTTGGATTTC
ATGGATCGATACATGCACGCTGATAAAAGTGATCTCCTGGTAAAATTGTC
ATCATTCAATCTTTCCCATCAAATtggaaaacaaaaatgaaacgATAGAA
GGATTTCATTTCATTTGTGAAACAAATAGAAACGTGTTTTATCTTGACCT
CAAAACGAAataatttttcactgaaatttcactGAAACCACTGTTACCTC
CAAAACTTAGCTTAGACTTCAATATTCTTTGTGCATAAGCGTCAAGTTTA
TTCAGAGTGTGAATATCAAATGAGCTGCAGATAACCAAATTATGTTTTAT
ATCTGAATTATGTTTCTTCCTTCTCAGTTCGAAGCTATCCCAGAATCCTT
GAAGAACATGCTACTGGTAATGTCGACTGCCGGCATTTTCGAACAGCCAT
GTGCTGATGGGGAAGATGGCGTACCAAGTAGCGCTGCAGAACAAGAAAAA
CATCGAAAGTATTCTGCTCTGTGGCAGGTAATCAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaactgcttc
gctcataaattcgcttcgcaaaaatttcTATTTGAATGGAACgctaaagg
ttttatttttacataagtgttcccgtttcgtATTGGGCACATATTTCATA
GcaggacagtgtctgtctaTTATTATATTGtgctaaataaacaaaaaatt
gtttttcttttcctctgtctgaccaatcttgctccacatctgtcaatcca
atgtgaaaaagcttgtaaatcaaaTTGATTAGTAcatagtgggcaccccc
ccccttgaaaaagaggggggtttgagaattttactgaatttaaaagaaga
GGGGGCTTGTGAAAACTTCAAATAAAAGGGGTGGCTTGGACAAAAAGAGG
GGGTTGAAtaaaaagaggggggttgagCTAAAAGAGGGGGTTGCCATTTT
TAAGGGGGGACTTGATACCCCTCTGCCtctgagtaagcaaacgatatcgc
tcttatttaaaaacaacacCTTTAAGGCCAACATTCCACGATGCTATCTT
GTTCTTTGGCTTTAGATGAGTTCAAACTTTGATTGTTGATAACATGTTTA
AGCCAATTCATGGGTTTTGAAGTACACGAAGCTACTAAATGTGAAAAAGA
CTCTTTAACTATTCGCATGCATTTTTCAATTGCTCCGGTTGATTCACTTG
CTCCGGTTGATTCACTTGCTCAGCCAATAAACTTCGTTCATTTAGGTCAC
GTGGGAAAGAATCGATTGCTTCTTACCAAACTTACGTAACGATTTAGTAG
CAACTCAATCACCAGTTTCCATTCGCGCAATATCACCCCCTGAACCAGAT
ATTCCTTTAGGCATGACTATGCACACAACTGATGAAAATCAGGGGGTACA
AGAACAAGAAGATGGTCATGTGTCTCCAGTTCCTGTTCAAGGTACGTAAT
ACGTTTATTGTCCGAAACAATAAATAAGATTAGGTCGAGTTAATTCCGCT
CGACAAGAGTAAGACATTTTTCTTCGCTACTGAGTTAGGTTACTCAATAC
TTTTTACTTTCAGGCACCTGTTGCCTAATAGACCTCTGTAcggtttttcg
atttttcgatttttgccgACTCTAGACTTTGTTAGAACCTTCTTTGTGCT
AGACTACAGATCATCCCAGTTATGAACTTTGTGTTTTGCTGAGTTGAAGA
GTTGACTCGAACACCTTCAGAAAAGgggaaaatccgtcttttataAGTGA
CGAAGTTTTAGTCAAGCCAGTAAAATCGATCCCACAAAATGTCAATTTAA
TGTTAATCCAAGGTCAAATGATATAATTAATTGTCAcacatcatttttca
ctttttttagaGTCAGTAACAGAGAGACCACCATCACCGGAACCGCCCAC
TCAAAGCATGTCCGACTTTCAATCAATCACGCCCTCGACACCGCAAAGAT
CGGCCGGAACAAGTCCTCTCATGTCACCGGAACGAGCCGCAAGTCCGTTA
CTAGCCGATGATCCTCTCTCACATCTCAATATCAAACTTCATGCACCCTT
ACCGGTATTAAGCCCGCCCGGTAGTGTGCAACCGATACACGAAACGCAGC
CGGCACACCCGGTACCCATTCTCCTTCCTTCCTTTAATTCTTTACAGACT
TTAGGTTCTCCACGGCAGAGTGAGAACTCATTAACAACCTCCGCGACGGA
GGGACAAGGAGCCTCCTTGGATACGTCTAGTTCTGCGGAGAAGAGCACCA
TCTATGATATTtaataattgatttttaaactAGCTTTTAAAAGTACTACT
GCATGATATGAATTTTGGGTCAAACAGCAATGCCTTTAAAACCTTGTTAA
GGGTTAATACTTCATGATTTTTATCATATATCGGtactttttttaagaat
tctcTGTTTAgagtttttagtctcttgtagTATGGGGATTTTATTTCAGC
TTCCTTTTCCTTAGATAGGTAGTAGGGTGTTTTCTTTTGggatttaataa
ttttctttgttgtgtgtaatgactttgatttttgtgaaaaagtaaaaaat
acaaagaatcgGTGACGATTTCTTTTGTAAGCCTTTCATGACCATCTTAG
TACGAATTCACTTTACACTCGCGTCCCGGAAATTCTTGATAAACTCAACG
TAATTTATTATACGGAAAcgctc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013663TCONS_00013663Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013663-proteinTCONS_00013663-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:63337..69059 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.7	7.4	8.92	8.14	30.24	22.89	30.29	34.01	22.76	27.82	23.46	22.01	18.46	20.05	18.63	25.25	22.76	22.78	17.18	17.33	17.4	17.64	18.68	21.13	25.78	23.62	13.85	12.18	21.4	21.06