XLOC_007699 (gene) - C. hemisphaerica

Overview
NameXLOC_007699
Unique NameXLOC_007699
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000173:219656..223102-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007699 ID=XLOC_007699|Name=XLOC_007699|organism=Clytia hemisphaerica|type=gene|length=3447bp|location=Sequence derived from alignment at sc0000173:219656..223102- (Clytia hemisphaerica)
CCTCTCTAGCACCTCCGGACTTCAAACTCGATGGTACGGACGCTCCATAA
CAGCGGCATAACCAGTCAATCATTCTAGCAGAACAATTCTTATCTTTAGA
GTTATAAACAAACGAAAAAATAAATTTTTGAAAAAAAAACATGGGGACAA
TAGTGTGGTGGTCATTGTTCCTGATGCTAAAATTAACAGTCGTTAATGGC
AAAATACAACATGGTAAATATATCACGTTTTTTATCTGTAGAGAAACCAG
GATTTGAGTACATTTAAGAAAGAAATTTGGAATTAGAAATTAAGAATATC
GCAAGAACACCTGCATTTTACACCTTTTTTACATGTAGAGAGCTCATGTT
TTGAGCACATTAAAGGTTGAAATTTGGAGCTAGAAAATAAGAATATCATT
TGAATTCTCGTTCTGTTCCGAAACTATTCAAGGCTTTTTTTGGCTAACCT
GTAAAGCTAAATAATTATTCTAACCGATAGTACAGTTAGTTTTGTATTAA
TTCAAAGTGGTTAAGTAAGTTTGTGACCCTTTTCACTAGCTATCTACCCG
AACATATGGGATGTCTCCACTTACCCTTGATTCTTACCTTAATTGTTGAG
CATCAAGCGGGCATCTTACGGGTCGTAGCTGGATGCTCTACCTCCATGCT
ACGGCCGCTTTTCGTATAAATCTTAAAATTGTGTACATTCTTTTTCATTC
AGGTAATGGTACATTTCTGATTAACGGTATCTTTCCAATTACAAACGAAA
NCCTCCATGCTACGGCTGCTTTTCGTATAAATCTTAAAATTGTGTACATT
CTTTTTCATTCAGGCAATGGTACATTTCTGATAAACGGTATCTTTCCAAT
CACAAACGAAAATGAAGAATTAAACCCTCAACTCGGTATAATGTATTCAG
AGGCGATGAAATGGGCCATACAAGAAGTCAACAAAAATCGATCCTATTTA
CACGGATACCAATTCGATGTCAACAAGATTTATGATTCGATTAAAGAAGA
GCAGGTCCAGAAAAATGTTTTGGATACTTTCATGGAGAAGATACCGTTCC
TTGTAGGTCCGTATTCCTCGGATACGTCTTACACGTCAAGTATCTTGACC
AAGACGTTTCAGGATATCAACGGGATCAGCTACAGTGCAACGTTCTCGGA
TTTCGACATGATGAATTCGGACGAAGAACGTATGTTGAGAACCGTACCGT
CGGATCGTTTCCGTGTCGACGCCGTTCTAGCGTTGATTAAAGATCTACGT
TGGAATTTCGTTTCCGTTGTAAGCTCTTACGGATATAATGGGGAGCGCGA
AGCGTTACATCTGACGTCCAAGATTTCGTCTGTGGGTGCTTGTCTCGCGG
CACAAATCGATCTCGCCAAATCACCAACAAACGAAGATTACCAAAAAACC
ATCGATAATTTGCGGTTAGATTCTCGCCTCAAAGTTGTCGTTTTATTTAC
ATCTGGGAAAGACACGAGAAATTTTATGGCAATGTTAAAGAAACTGAATT
TGGCGAATCGGTTTAATTTGATCTGCGCGTACGGGTGTACAAATTATATT
AACGTTATTGAAGGAAATGAACTCGTGGCTGAAGGAGCTCTAAGTCTCGA
TGTCAAACTACCAGATACTTCTAAATTTACCGAATATTTTCTCAACAAAA
AGCCCACAGCTAATTCGTTAGAACCTTTCAATATATATTGGGAAAGACTT
TTTGATTGCTCTTTAAATCAAACGAACATGCGAAAATACTTAAAAATGTG
CACCATGAAGGAAAGTCTCAAACTGGGGTCTGGATACTACATCAATACCC
CCGTCCACACTGTCATTAATGCTGTTTTTCATTTTGCACGTGTTGTCCAC
AGCTTCTCATTAGTTTATTGTCACGTGGATCGGAATTGGGTGAACAAGAC
AATGCCATGCCCTCTCGACCCTTCAACTGCCAAATCCTACTCCATGTTTT
TTCATCGCGTCCTAAAGAAAAGTGCACACAAAGATGGGACGCTTTACACT
GGCACTATTGAGCCGTTCACTATGGGTGTTGGAAATGAAGTCGATGATGG
TAAGGTCCAGTATGAAGTTCACAAGTATTCGTTTAAAAATCGGGAAAACA
CGAATACAAAAATATGGCAATGGGTTGCAGATCGTCAAAGTAAAAAACCG
GGAGTCGGGAAATTTTTAGAAGCCTGGTACTCGGCTTCGCCGAATATGAC
GATCGTGGAACATCGAGGAACGTGCAGTAAAGAATGTCCTTTAGGATCAA
TTCGTGATTACGATCGAAACTCATTAAAATCAAAATGTTGCTGGTCGTGT
CAAGCGTGTCCGAAAAATCACCGTGTCATGAATAATACGTGTCAGCCGTG
TAAGCAAGCCGAAGTTGTCGGACCACGGTACGGAACATGCCTTTTAATGC
AGGAAAGAATGATAAGTTGGAGAGAGCCGATTGTTCTATGTTTTATTGTT
TTATCAATCCTCGGGATCTGCTTAACCGTGTTTGTAGCGCTCGTTTTTTG
TCGTTACAACGATAACCGTATCGTGAGAGCAGCCGGCCGTGACTTGAGTT
ACATGATTTTACTCGGCATCTGTTTCACATTTTCATGCTGTTTTGTTTTC
ATATGGGAGACAACTCAATCGACGTGTATCTTACGAGGCGGCTTACCTGG
ATTTTCGTTCCTGACGTGTTACGCTCCTCTCTTCTTAAAAACGATTCGTA
TCTATCGTATATTTGTCGGTGCGCAAGTTTCCGTATCCCGACCTGCTTTA
GTAAGCACGCAATCACAATTCATAGCTTTGTTTGTGATCCTATCAACCCA
ACTATTAATCAGTGTCGTTTGGTTCGTATCGAAGATTCCAACACCGGAGA
TTATAGTTACCGGAGAATACGTAACCAGTCATTGTAGTGGTGACGCCAGT
CCCATTCTGTTATTCTTGAACTTATCTCTAAGCGTCATATTCATGGTGTC
GTGTACCGTACTAGCCTTCAAGACACGACATTTTCCGAAAAACTTTAACG
AGGCTAAATTTATTGGAATCACGCTTTACATCACTTGTGTAGGATGGGCC
GTATTTCTACCAGTTTATTTTTTAGCACCCCATTTACACCGTGACTTTAT
GAAAGAATTATTGATGTGTGCTGTATGTACTTTTATAGGCTATGTTACAC
TGTTTGGTTTATTTGGACACAAAATGAAGCTGTTGTTATTCGGACCACTT
CCGCCCGCGCGACAGGGGAGTATTCCTACATGGTATATACCACGGGAACA
TTCGAAAAGTCTTTCAAGTACTTATAGCTGTGAGTGTAAAATGTACAGCC
CTAAAAGTTGCTGTGAAGAACTGAATGGATTCTCTAGTTTATAAACTTTT
ATTTGTTGCCTGTATTTCTTAAGTTTATTAGGGGTTTTTAATTTATTTTT
TGTAGTAAAGGATGTTTGTTTTAAAGATTGGAAAGAGCGAAAAGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013793TCONS_00013793Clytia hemisphaericatranscript
TCONS_00013792TCONS_00013792Clytia hemisphaericatranscript
TCONS_00013791TCONS_00013791Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013791-proteinTCONS_00013791-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000173supercontigsc0000173:219656..223102 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.1	0	0.05	0.11	0.16	0.14	0.4	0.22	0.29	0.85	0.15	19.12	19.89	1.51	1.83	1.82	0.74	36.98	31.9	1.54	2.15	1.27	0.72	4.95	2.79	0.14	0.03	0.02	0