XLOC_007705 (gene) - C. hemisphaerica

Overview
NameXLOC_007705
Unique NameXLOC_007705
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000173:426145..432471-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007705 ID=XLOC_007705|Name=XLOC_007705|organism=Clytia hemisphaerica|type=gene|length=6327bp|location=Sequence derived from alignment at sc0000173:426145..432471- (Clytia hemisphaerica)
AATGAATGTACCTTTGGGCGATGTTAAAAAAACAGAGCTAAAATTCAATA TGGCCGACCCATGGTGTGGAAAGTGTGGTAAAAACCTGATGAATCAGCTA TTTTGCACAAATTGTGGAAACAAAGCCTCGTCAAAAGAAGAAGATGACAG TGGAAATAAATCAGAAGTTATGAATTACAGTTTTTTCAAAACTAAAAAGG CTTCAGAAAGACGAGTTGGAGTAGCCAAAAAGATCACAACCAGGCAGAAG AAACTTCAACAACAAAGCTCATCATCATCAACATCAGCAACAGAGGAAGT ACAAATTAACGTTGGGATTATTGAAGAGAACAAAAGTGAAACTCTTACTA AAAGGAGAGGATCGAGGATCCCTGTCACAGTATATAAAGGAGATGGCAGA GAAGAAGTGTTAGCTAAGTCTCTGAAGAAACTTGGAGAACATGACCAGTT CTTTTGCAGATATGACACATACCAACTGTGTTATCCTGATTGTTCCATGG CATTCAGAATTCCAGGTTCTTCTAATATTCCCTTTACAGTGGAAGGATAC AAACTTAAACTGGGAAAACCATATTCGAAAATAGAACTATTTGTCTGTCT GGCGGTAAGTTTGCTAGAACAACCTATAGACAGTGATCCGGATCTGGATA AAAAGAGCACTCTGAATGGTCTGAAGATGGATGAAGAGGCAGGACCCTCT TTTTCAAAGGAAGTAATATCAGTCTCTGATGAAGATGATGATAAGACCAA AACAATTGCTGATGAGAGACCCAACAAGTCTAGAGTTGGTTCATGCCCAG TTTGTTCTCAGTCAATTCCAATTGACGATCTGCAACAACATGCAAATGAT TGCTTAAATAAATCACCATTAATGGAACTGCAAGGCCATCTGCCAGCACC TGAAGATCTTGTCGATCACACACAGACAATGTTTGAAAAAGATTTGGATG GAAAAAGAACTTTTGAACCAAGAAATCAAAGTGACTATATAAGGGAGGTC CAAAAGGCTCTTGTGAAATGTGTTTTAATTGAAAACCCAACTATTGATTT GTTCGTTAGAAGGGGATTTGAGTTTGATGACTTTGCTAGGTATTTCAACA AGTCCTGGAACAAAAAAGAAATTGGACATATAATCAAGATCAATTACCTT GGAATAGAGGTTGGTGTTGACGATGGTGGCGTTTCTCGAGAGTTTTACTC AGGTATTGTGTACATCATTATTTTTATACCGTAAATTACCCTAATCTTGA CACCCTCATCCTTAAGTCGACAGTCAAAATAAAAAGGACTTATTGAAATA TGTGAAGTGTTTAAAATGACATTTTTATTCAAAAAAAAAATACTGACATA ATTATTACGCTATCAGACTATGAAACAATAATCTATAAAATATTATTTTA CTTTGTATCATTTAGGGTAATTTACGGTACAGTGAGTGGTCCTAAATCCG ACAGCCCTGCCTAATTCCGACCCTCCAAATAACTGATATGAAAAAAATTT TATGTTTACAAACATTCCCTCTTCAAGTTGAACGATAAACTATTGCAAAG AACTCTCGAAACAAAACATCCAACAAGATGGCTTTAATGTCAAGATGTCG ATTGTCATGATGTGATCAAAAAAGTGTGACTCGTAAAAATAATTATTAGT AATTAAATAATTACCTTTTATTCTGAATCCATTATTTGTGTTTTAAAAAA CGTTAACAAATGTTATTTGATTTAATGGGTTCAATGTATCAAATCTCCCA GTTTAGTTGACACTTTGGTATCTTTGTTACGTCACAGCGAAAGGTTTGTT TATATTTTAGTTAACATCTTTGAAAGATCCCATCGGAATTAGGCAGGGCT GTCGGATTTAGGACCACTCACGGTACTTTGTCATGAAGTAGAGTAGAGTC TTCTATGTTGCAAAAAAGGCTCCTGTTTGCGGAAGAGTAAAAGTAGCGTA ACAAATGCCCTGTCCAAGAAGTGGGATAACCAGTTGCTCGACAGCCATTT GTTTGACACCAGTTACTCAATATTAGGTTGCTTAATTAACAACTAGTTGA TCACTTTATTCCTGTAGAATTTTAAAGACACGATGGAAAGTTTAGATAAA GAAGCTATGTAACATAGGAAACAAATTTGATGTAGATTTAAAAAATCTGG TGTCTACCATGTGATTTTTGAAAAACCAGTTACTACACTGTATTAACTGG TATATTAAGGGTGGTGCTTGATCATTTTTGTATATGTATATAGTAACTGC AAATATTGTGAAACTTGCGAAAAATGGCAAGATCAAGAAAAAATTTTGTG GATTTAAACTTAATTTTTTAAGAATTTTTTTTGAAATCTTCCTCAATTAT TAGAATTTTTTTTTGAAAATTTTTGACTTCTCTCCAATAGATCAAGTGTA TTTTGCAATACGAATTTGATTCAACAAAACGATTATCCAGAAATCTTTTT ACAAAAAAAAATTTCTTGAGATTTTGAAAAACATTGGAATTTGACTAGAT TTCCTTGAAAAATGGCCAGAAAAGGGTGATATACACAAAATNATTTGTTG AGATTTTGAAAAAAATTGGAATTTGACTAGATAAAATGGCCAGAAAAGGG TGATATACACAAAATTTTGCCTAAAAACTAGTTACTAAACTAGTCACTAC CCTGGTGTAGTAACTGGTAGGGTGGTGGTGTCCAAATTTTTTTGTCAAAA TACCAGTGGTATCAATACACATGGTATCGTGTAGTAACTGGTTGACCCCC CCTGTTTCTGTAAAAAGGTTTATTAGAATTTTGGATTTTGGTTCACCGAA AAGTACACCAAAACTTAAAATTTCTATGGGACATGTCTCTAGAACGGTTT GAACCCCACAGGGAAGGATCAGCATTGGTGAACTTTTCTTGTCCGTTCTC AGAAAGTTTCCTGTCCTTGTTTCCCTTACCAACCATTCCATCATTCCCAT CATTCGGCCTCAAGTTTCGCATTTCCACACTATTCATATTCAGTATACGC AACCTTTTCTACCTTTAGAAGCCTTCTCTCAAGTAATGCAACGATGTTTC CGACCTGTTGATCCTAAAAATCAACAATTGGGATTCGAACCAGCTCTTCG CTATGTTAGTGCAACTGATGGTACTCTTGAGGCTATCGGCCATCTATTTG TTGCATCCTTAGTCCACAATGGTCCTGGGCCCAACTTTTTTGCACCCTGG GTTTTCCAATATATCAGCGGTGGTTTGGAGAATGTCATTTTACCTGAAGA TATCGGTGACTCACTTTACAAAAAGGTATGAATACTTTTCATTGTATATA AACATTTCCTTGTAAACATTTTCGTCATTTTTAACCCTCAAGTACCGAAA CCCTGATTGAGGTGTGAAATTTTCTGACATTTAAAAAGTACTATTATAAT CAGCATGAAGACACCTCTCTCATGGGGATCACTATGCTTTGAAAGTGATG GTGAAGTTATGGTGCCCTTCCTGTGGAGGTATGAAAAAGGTGCTATTGGC ATGGTCATTTTGTTTTAACTCTTAATTGGAGTGTTCCATTACAGGCTTTT GGTTAAGATACTCAGCACACAGTTTTACAGTGATTTAAAGAGAGGACATG TTGTTCCCTTGCTTTAGATATACCATGCCAAGACTGACGAAGAAATGATG TCCCTTGTTGAATCAGATGAGGGCTATGATATGCTTGAAGCTATTGGTTA CAGTGGTAGTACAAGGACAATTGGAATTCTTTCTCAACCAAAGATACTAA GGTATGTGCTGGTAATTATATGGAACGTTGCGAAATTACGAAGCAAATTC ATGCAAGTATATTCATGGGCGTTAATAAAAAAAACCTACCTGGCTCGAGG GGTCCCCCTATCACACTATTAGTCCGGCGGCGATCCAGGATCACCCTTAC AATTAGTAAATATGGGTTTTTATTTTATTTTCCCATCATATGGTCCCTTG GGACCCCAAAACCAGTTTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAGGG TCATTTTAGCCTGGGGGTCCTTAGAAAGTCGATTTTTGAAGTTCTCATTT AGCTAAAACTGATTGTGCCATCAGATAGAGCTTGAAGAGTAGATCTGAAA ATGGGGTAATTTGTCTCATTTAGTGGACTTAGGCCCCCGGAATTGGTCGA TACGTCTTCAAAAATGCAATATTTTGTGCTGACGTCAGCATTTTTGAGAG AATTTTCAGCAAAAGATTCCACTTTTAACAGATGCGTCTCGAAGAGTACT ATCGATTAGAGGGGTCATTTATAGGGTTTCCTAGGCTAGATCATGAGATA TTAGAGTTTGAAATTTTGCTGACTCAGCAGAAAAGGGCAAAAAACGTTGA AAAACGCTATCTGATGGCACAATCAGTTTTAGCTAAATGAGAACTTCAAA AATCGACTTTCTAAAGACCCCCAGGCTAAAATGACCCTACCCCCTTCAAG CCCCCATAAAAAAATTTCCCCAGCTTTGCCACATTGGCAAAAACTGGTTT TGGGGTCCCAAGGGACCATATAATGAGAAAATAATATAAAAACCCATATT TACTACTTGTAAGGGTTGATGCAAAAAGGCCCTTTTCGCCGCCGGACTAT ATGTAAACCACTGTAAATTTATAAGGATTTCTTGTTTTCTTTGATAGGTC CATATTCATGAAAGAAAAAAGTGGAATGTTAAACATACTGAATGATTTAT CAAGAGGCATGCAATATTACAACGCACTTGCGGTTATAAGAGATCATGTG ACATTGTTTGGACCATGCTTTACACCCAGTAATTTACTGTCATGGGAATT TGATATTATATCAACAATGCTTTTTCCACAATACGACGAGACAGATGGAT CGAACAAACGGTTTCTGGAAATCAACACCTACAAATCATTCCTTGATTTT ATAGCTTTGAGTTTCAAAGATGGTATGTAGTATTTTCACTATGTCCTAAA CCCGATATATAAGAACAATTAGATTTACTTTATTTGTGGGTCTTGGGTTG AAAAGCCTTTAGAACACTCGTTGCCCGATCGAGCTCTTTGCACAACTTGT GCACATTGAACACCTTTTCATGATATGCTAGTCGGGATCTCTCTAAGCTC AGCTTCCAATGAAATTTACTCAAAAAATTATTTCATCCTTAGAAAACTGT GAACTACCATCGCCAATTTTAATGAAATTCTTGACCGGATGTGAGACCGT CCCACCTCTTGGCATCCCTACGAAGCAATTCAAAGTTTATTTCAAGCATG AATGTCAGCCATCCGATGAAGGCAAGCCTTGTGCATGCTTACCTCAAGTA AGTACTTGTGCTTTTTGGGTTAAGCTACCCATCCACATCTCCGACGAAGA TAACATGTGCCAGTCGTTCGTTAAAGCAGTCAAAGAGGGAGTAGGATTTC AGCTTGCGTAAATGGAAGGTGACAATTTTGGTCGTTGATATTTCCCATCA TATGTTTATGGATCATGTGTTTCTTTTCTTTTTGATTAACTTTTGTTGAA ATTTGTTGATCATGTGGCATTGGATAAAGCAAGCCCTTAATCGATTGCTT CATTGCATTCATTGCATTCATTCATTTTTAAACCTGTAAATATTGTATTA TTTTGTGAAATCTATTGTGTGCTTTCTAGACAATTTAACTTCTTTGAAAT CAAACTAGTCACGCTTTTCACGGACAGGGTTAAACGCTAGTATACTGCCT TCAAATCTAGAATATTTACAAGTCTACAAATTTTTAGGTGATTTTTCATT TCATCTCAATTTTGAGTTACAAGAAGATTTATTTATCAATGGTCTTCATG ACTCTGATTTTAGTATTTATTAGTTTTTAGTATTTAAGTCCGCTTTGCAA CTTCTTTTTTTTTCATTTGTAATTTTGTTTTAATGTATGACATACATTGT CTTCTTTTGAACGCGTACAAAAAATTTCAAGGTTTACTCCCTAGACTTGA AAGACCTTCTACGCCCCCTTCAAAATACTTTAAGGGTTTTGACTGAAAGA AAGTGAGCATCGTCCAGATTCGTGCTATTTCAGACCCTAAAAAAGGATTT TTGCTGATTTGATCTCATTTCAAAATTTATTCCCGACAACTTTTGTTGCT TAAGGTATCTCGTTTTACGTGTTCCTTACTACCCTGCGACACGGTGCAAA AGCAAACCTTTGTTTAGTTGCTGTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013800TCONS_00013800Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013800-proteinTCONS_00013800-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000173supercontigsc0000173:426145..432471 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.63 1.53 0.91 0.57 5.22 4.01 3.54 4.06 3.14 3.81 4.3 3.57 2.95 2.78 4.08 4.65 4.03 4.39 2.7 4.04 4.79 5.66 2.13 2.61 1.33 1.58 1.86 1.16 1.2 0.85