XLOC_007740 (gene) - C. hemisphaerica

Overview
NameXLOC_007740
Unique NameXLOC_007740
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000174:585091..588937+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007740 ID=XLOC_007740|Name=XLOC_007740|organism=Clytia hemisphaerica|type=gene|length=3847bp|location=Sequence derived from alignment at sc0000174:585091..588937+ (Clytia hemisphaerica)
CTATTATTTTGCTCCCACATTCAAAAGCTATATGTTTTCACGATATCAGC
CACCTTAGATTGAAGAAAATAAGCCCAATTATCTACCAATATccaaatat
ttctcatatttgAAAACATTGTTGAGAGTTTCGCACACAATTTTGAACTA
CTACTAAAGTAAAGTGAAAGGAAAAAAGACTTTTGGCAGACTTTATAACT
AAAACAGTTGACTAAATCTGAGGTTATAAGAAAAGGATGGAATTTTTCAA
GGATTCAATTTCTATCTGTCTGATTGTGATCTTGTTGGTTACAATTTCAT
TTTCgaaggtaaattttttttgaaatttttcttttttttccattGCCATG
TTTATCGTAAATCATAGATCCTTTaaaacaccccttctcacagacccggt
aggattttctTAGCCAGTTGAGGTAAAAAAAAcgaaccaaaactcgatgg
gattgatattcccatattttagCTTCAGATTTCAATTCCATAGTTTTCAA
GTCAATAAATTCAGGGAAAAGTCGCATAATATTTTACAATGAGGATTGGT
TTGATGATTATTactatccatatagcggtcattaagtaagccattaaagg
ttcGAACgacgggcggtattgaaaggttttgtgactcaaattgtcatacc
cacgctgaggaaactaaagcgccaggcctcagagggctgaaatatcatta
accgcccgggtatagggcaataacgtcatttgcaGCCTACTTGGAATTGG
ATTGAAGTCGTTGTATTAAAGCGAAGAGACTAAAAtaaagtcagaaaaaa
aacactttttggtcatttgcggcccgctcgcaaggtgctaaaaatttttt
gaagagatTGCATTGAAGCGGAAAGACTTggttgacgctagaaaaaaaac
gttgtttgaatgtccgatatgaataataatagtaatagcgtcaATTTTTC
GTTCGTagttgtcattaattctgcccttgcagtttgattattagccctct
agtgccaaATGACACCATCGGGCGAATAATCAAACTACgggggcagaaaa
taacaacaacgacctcacactgaacgctattgttatattatcaTTCTGAT
TTAGAGTATTATTCAAGAGGATGAAGAGCTGGTGAAAAGGAAAGATATTA
TCAACAATCACGAAGATGAAGAAGTATCAAACACATTGGATCGGCGATCA
TCTCGTTGCGATTTATCGATCTCAGCCTGTATCCCAGGTGTCGTGTCATC
GTGCAGAACAAACGATCAATGCCGTGCGTGTTGTGGTAGTGTTGAATATA
TGTGTCTCTACGGAATGTGTTGTAGAGACTCTAACGTGATTAATTTTAGA
AAGCTTTAATTTAATAAAAGAAAAGATCATCACGTTATAATAATTTAAAC
TTCGACAAAATCTTAGATTCGATTCCTTTTTTagcaatcaaaaaatttca
gtttttggATTTGGACACGGTACCCCCCCCCCATACCatcactgaaaaaa
atattgcagaCTTTTAAAGATCTATAAAAACTCTAAacagactttcaaaa
ctatttttaacGTACGCagtatttattttgataaagaGTCTGGTTGACAC
TTGTACAGTTTCTGCAAAGTCTTCAGTTTTGATGCTATTGTCCGCTGTCG
TCCGCttagagggtcagtaaacgcgggaaatacatatgcgcagagtcagg
gcgtcagggcggtttacgggaacaAATAGTGGCTGTAGAGGTTGGAACAA
ACGCTGTAAACATCTCCCACCACAGCTTACTCCGCCCCGGGTTAATCACc
gatttcaaatttatcccgcttCTCCTaaactatttctttttttagtgatc
ttgtgtagacgataggatcgtctagttTTGTATATGACCTAAGAATTCAA
AGATGGTATTGGATTATAATGATTTTTTCACCTTGTACCGATTTCTTTCT
ATTTAGGCTAATCTTAAGTTTATGGTTGCTCAATTTCAATAGATTCAAAA
GCATCTTGGTGGTTTTCAAAAACTATCAGGGGTGCTGATATGGTGGTGTT
CTTGTACTCTGAGAAGTAATTTCTCGAAATAATTTCTTCGAACAGTTGGT
GACTTGTTAAAAAAGGGATGGAATTCCTTCCTTCTTTACTCACATTCAAA
GAAATGTATTATCAAGATATTAGCCGTCTTAAAGGTTGACGAAATCGAGC
CCAATTACGTCTTCAAATATGTTTCTTCAATTTTGgaagatttttcttaa
aaaataaaacatatttttgTGAATCATAAACTCACTTCAGAGTAACTGAT
TAAGCAAAAGTAGAACAAGAGAGGTCTTTAGCAGATTTCATATTTAAAAT
ATCAAGCAAAACAGTTGACTAAATCTGAGGTTATAAGTAGAAAATGGAAT
TTTTCAAGGATTCAATTTCTATCTGTCTGATCGTGATGTGTTTAGTTACA
ATTTCATTTTCGAaggtaatttttctttcttttttctaagtttCATTTAG
AGCTTTTCCAGCCTTGATCAAGGTTTCGGGTCTTTTTAAAGATAATATAC
AAaaacgaggggtaaatcactaaaaattaggtgtacgagattttcatttc
tttttgatttttgatttctttttgatttctttttgatttctttttgattt
ttgatttctttttgatttctttttgatttttgatttctttttgatttctt
ttttatttttgatttctttttgatttctttttgatttttcaaaaaggtgt
acgtgatttttttcagtgatttacccctcgtacAAAAAGACATTATTGCC
AAGTTTGATCACCCATAGATGTTGCATTTAATAAAAGATACATTCTTAAA
TAAGTTCATTTATTTAAAGCGGGGGTCTGTTTAAAGCCCTGTTTTAAGGG
TAGCAAAAAATGGTCATAGCCAAAGTGAACGAACTTTTAAATTTATAATA
TGAAGACTTAAAGATGCtactttttttacaatttgCTATACAATTTTAAA
GAGTATTATTCAAGAGGATGATGAGCTGGTCAAAAGAAACGATATTATCA
ACAGtcatgaagatgaagaagtatCAAAGACATTGGATCGGCGATCAATA
TGCGATTTATCGATCTCAGCCTGTATCCCAGGTGTCGTGTCATCGTGCGT
AACGAACGATCAATGTCGTGTTTGTTGTGGGAGTGTTGAATATGTCTGTC
TCTTGGGAATCTGTTTTGAAGACCGCGGTGTGATATCTATCGCGTCTGCT
GGTAGTAAACTTATTGGATAGTGGATCTCAACACCTAATATTATACAAAG
CGTTCAAAAAGAATTAGGGAGTTgttttttaaatcatgtttcCATTACCA
TGCGAATAATGTATAGattaaacaaagaaatattatttGATTCCTATTGT
TATAACTCCAGTGACAGAAGATATATGAACCTATTGCCTACATAAAATCG
GTTCCCTTTTTTTCCGCACTACACTGTATACTATACCGTGTGTTTAGTAT
CTATATACCTTAAgcggataaattttggcggagattaaatttggcaaatt
tgacGAATTTGGTCaaaaatcgccaaattaaatccctgcaCAAATTTAac
gaattttttaaagaaaacttaaaggaaaaaattttggtgggaatttaatt
tggaggATACTAGCtgtataaattaaatttgacgggaatctaatttggcg
gttgcaggatattttgggccaaaagcgttattaaataagcaaaaaaacct
gttttaaggcttgaaatagtacgaatttggggaatgcgtgaaatgaatta
aatttggtgggaatttaatttggcggatggaggaaaaaattaatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013857TCONS_00013857Clytia hemisphaericatranscript
TCONS_00013858TCONS_00013858Clytia hemisphaericatranscript
TCONS_00013859TCONS_00013859Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013859-proteinTCONS_00013859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:585091..588937 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.04	0.19	0.19	1.05	0.56	23.56	21.74	58.65	51.71	34.09	48.87	0.2	0.12	0.02	0.03	0.3	0.18	0.23	0.14	0.71	0.84	0.15	0.3	0.52	0.38	0.48	0.96	0.14	0.29