XLOC_007813 (gene) - C. hemisphaerica

Overview
NameXLOC_007813
Unique NameXLOC_007813
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000175:399808..402927+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007813 ID=XLOC_007813|Name=XLOC_007813|organism=Clytia hemisphaerica|type=gene|length=3120bp|location=Sequence derived from alignment at sc0000175:399808..402927+ (Clytia hemisphaerica)
gTTTACGTAATTAATAATAGGATTTcctgttttccaaaaaaaaaaaggat
tggaaaCTAACAAAAGGGATTACTGGTAAGGTACTTAAAGACAGAAAAAG
TTGAATTGTGAATAAAGTAGAACAAAGATCGGAATAcagagaagaagaaa
aagaagaaacaaaattcATACATGATGTGGTTATTACGTTGCAGCCTTTT
GGCATGGCTTGTTGTATTTTTTATCGAAGTGCGTTTGACCAATGCAAACG
ATGACGCAGTTGACCATTATATACATAGTAAGttaacaaaaatattaaga
TACTTTTCTAACTGGAATAatcggccaaaatatcgtcagtggaaaattac
actccaatttttgtccccaccgaaaataatcaaataaaccatcactgcaa
aatattatgctattttcccatcctcactgaattttctggcttgaattgaa
aacaaaagaatgtaaATCCCAAGCcagaaaaaatatggaaatattaatcc
ccatcgagttttcaGTCCTTAATTTTTATCTCCActagctgaaaaaatcc
tactgggtcaACTTTTGAGGGGGGCTGGTAATAAATTTACAAGGAAGAGG
GAATCGTTGTCCATGAAAATCCCAATGATTCTCAGATATTTTGACTTCAT
ACTTTCAtggtaaactcgaacccagGTTGCTATTTGTACTTATTTTActa
ccgtcgttttgtataagtttcccatttccgcactaagattcctttgccgT
TTTTCTATTGACCAGGACTACGGTTTGTTAAAAAATTAGCCTCGGAAAGT
TAGGCAAATTTGTtgcacaagattttccgtacctttagaaacaaaccctt
tccaatcgCTTGCTGGTTATCCTatgggaaaaatagcggaaagatttcgg
aaaagtgacaagaatcttagtgcggggaaacttataaaaaacgcgacggt
agtctgaatcgcagacctctataggtataccttatcgggaaaaacttcgt
cggggaaaagtcacgaaattttggacaagtgacgaatattttccccgacg
aaagttttccccggccttaatgcgtttaccaactaaccagcaagtgacga
atttttccccgacgaaaattttccccaaagaagttttccccgataaggta
cctcTTATATATACATCTTAATAAGGAACTCTTTTTGATAGATGACGAGC
ATAGAAGCATATGCTTTCACTTAAACTAATTAAggtcaaaatcatcaaaa
attttcaatttggttttcagtcaaaaattttgatcacattacAAACCGAA
AGATTGGTAATACAAGAAAAATATTCCCTTATCATCATGATCACCCACAT
GGAGACAAGGTTCACGAACATGAAAACGAGGTTCACACGAAACCTGGTCA
CCATGATGACGACAAGAAAACGCGGCCACAGTTTGTCGGCCCAAAGGTAA
GGACAGTTAATCTCGTATCCATGTATCCCAGGCATTTGAGATAAAAGAAT
TTTAAACATATAATAGACATGATAAAGATAACTTtagattgaaaagaaaa
ttagcaacctcgtacccagagccactagCACCACTTTTTTAATTTCACTG
ACAAAGGTGATGCAACTTGTTTCAACGTCAATTTACATACATGACTTaca
atttttctttgacttttatATCAATAGCATTTGAGAAGAAAGACCAATCA
ACATGGGCGTAAAGGATTACGTCACGGACGTCATGGGCGAAAAGGATTAC
GTAATGCAGGCGAAGGAATACGTAATGCAGGCGAAGGATTACGACACGGG
CGTAAAGGATTACGTCACGGGCGTCATGGGCGAAAAGGATTACGTAATGC
AGGCGAAGGAATACGTAATGCAGGCGAAGGATTACGACACGGGCGTAAAG
GATTACGTCACGGGCGTCATGGGCGAAAAGGATTACGTAATGCAGGCGAA
GGAATACGTAATGCAGGCGAAGGATTACGACACGGGCGTAAAGGATTACG
TCACGGGCGTCATGGGCGAAAAGGATTACGTAATGCAGGCGAAGGAATAC
GTAATGCAGGCGAAGGATTACGACACGGGCGTAAAGGATTACGTCACGGG
CGTCATGGGCGAAAAGGATTACGTAATGAAGGCGAAGGATTACGACACGA
ACGAAAAAGATTACACAGATTACATCAAGTTGGTACAGAACATCACAACC
AAAACAGGACAGGGCGCCATGGCAGAAGAGGAGGGCGTAAAGGTAAACGC
CCCAACCAAAACGGACGTCGCCAAGGACAAGAAGGGAAGCACGGACGTAG
AGGTGGAAACAATAAAAGACAAGGAGGAAAGAATGTTTTTACAACGGTAT
TGGGCAAAAAACTGAAGAGACATGCGTTGAAGTTGTTACAGAAAAGAGCG
CTCTCTTCCCAAATTGAGCCTGAGGTCGTGCCTGATCAAACAGCACCATG
AAAGAGGGGACAGTTCGagtcaatgaagtataagcccgaagggctagaat
tgaatctttaacctttctcaattaagaaaaagtgaagccttaaaatatgc
gccgtatttttgacgacgaaTTGAATCTAGCAACTCaacaattatttttg
aaatttagccgTTAAATTTAGTTCCAAtccgtcatttgtgtaaaatccAG
Gcgggccgctcaaggccgcgcaactttggtaggattttgttggcttcaaa
tcctaccaaggagattcgattctagcccttcgggcttatacttcattggg
acAGTTCGAGTGCTCTCATTGTCTACCGTTGGGATTTAAATCTCGTAAAA
CTTTCTCATAAAAAGAAGAAGATGCTCGTAAAATAGACAAATAACAACAT
TAATTTCATATTATGTTTTGTTACGGATTAATAAAAGAATAATCATAAAA
TCACTCTTTATTATAGCTTTTTATCCCTGTCTCCCTCTTATACCACCGTT
GAAGTTACGGCCTACAGATTATACACTGAAGACGGCTTTTTATAAATAAG
CTGGATCATTTGGCGCTAAAAACTACGTCGAGTTTTTCTATTTGTAgtaa
atgggctgttccattaaatttccatacaggcgggtggacgaaccttttaa
agtcaaaaaaagattctaga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013963TCONS_00013963Clytia hemisphaericatranscript
TCONS_00013964TCONS_00013964Clytia hemisphaericatranscript
TCONS_00013965TCONS_00013965Clytia hemisphaericatranscript
TCONS_00013966TCONS_00013966Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013966-proteinTCONS_00013966-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175supercontigsc0000175:399808..402927 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.07	0.12	0.07	1.01	0.82	0.85	1.06	1.24	1.57	4.27	1.09	2.01	10.16	6.58	9.25	0.44	1.22	0.29	0.2	0.39	0.7	0.23	0.16	0.65	0.84	0.06	0.28	0.1	0.13