XLOC_007904 (gene) - C. hemisphaerica

Overview
NameXLOC_007904
Unique NameXLOC_007904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000181:340485..344106+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007904 ID=XLOC_007904|Name=XLOC_007904|organism=Clytia hemisphaerica|type=gene|length=3622bp|location=Sequence derived from alignment at sc0000181:340485..344106+ (Clytia hemisphaerica)
CAGACGAATTGGTAGAACCCAAATTATGTGAAATGTTCAATCCACCATTC
GGATGTTGTTGGGATAACCGCACTGTTGCTTTAGGTCCAAACGGTCAAGG
ATGCCCAGGTAAAGGATTGAATCTAATAAATTTCAATAATATTGGGAGGA
GATTTACGCATTTAAATGGCGTCGATAACTTTACCGCAAATTAACTTTTC
GTGATTTCTCGTTTGTCCTAAAATACAAAAGTATTTATAGACGAGGGAGG
GCTGTTATAGTAGGAAGTCATTTGCTGCGCTGCCTTTTAATGGGAGGGGC
TTTTCTAAAATTGGATTGTTTGTGGTCTAAAATGTGCTGACAAAGAGATT
ATATATCTTTTGATCTCTGAAAAAGATTGTTAGTTTGGTATagtatttct
taaattttatgtATGTTGCTTTCCCTATGACGGAGACGATTAGCTTTTAA
TTTGTAATGTCTTTATCCTGACTGATAAAGGAGGACGGTTTTTTTGCGGT
TCAAAACGGCAGGTTGttccaaatcgtttcagtcattCCGCCGTTCTCAA
AAGGGTAGATAAACTCTCTCTCTAATGACCTGGAGATTTAAGATTTAATC
CAGAGAAACCGGTCCATTGTTTCTTTTAACAATCCATTAAAAATGATGGT
ACCGTTATATATTTAATCTTTATTCGGGGGAAATCAAAACATAATAGCca
cattctttttcaccgtccaacataATCTTTATTCGGTTACAGCTTGCAAG
AACAAGAAGAAAAGTTGTCGCAAATGGAAAGATCAATGCGGGTCAGAATT
AGTCAAAGATATTTGCCCTGAAACGTGTGGAATGTGTCGTaagtcaatta
tttttttgtgtaaACTTTTTTGGGGATTTCTAATTATCACAATAATCTTC
ACAAAAGCCGAAAAGCTCCTCCTTGGATAAATTGCGTTGGCCATATTTCT
GATCAAATTACTGAATATTGTATGTGTTGATTTACCTAGCTTGTGAAAAC
CTTTCCCGGAAAATTCAATTAGTATTAGAAATCCTCTAATGATGGTAATG
AAAAATCTTTGttcacaaaaaataataattttattttcctttttcttcag
CTAAACCGAAAGTAGCAAAATGTCAAGATGAGCCATCACAAAAAGATTAT
TGTCCACTCTACGCCCGTTTCTCGCTTTGTAAAAGTAAACAGATACGAAA
GAACTGCCGACACTCGTGCGGTGCATGCGACGAATAATGAACCAAAAACG
aaccaaaaacgaaagtgaaagtggtcTTGAGGTGACGTTTAGATGAAATC
TTCTAATTTGTTTAGATGACGTAATATGTGACGTAATGATGACAAATCGT
GCGGTCGATGGCGTACATCAACGCCTGACCGCGCGATAATTCTTTAATGG
ATGTTGTAAAACGAATGCGTACCCATTTTATGGGATCGCTAATCttctaa
atgttttttgatgacaacacgcaaaaaattaacatttttggtaaaatttt
gcGAACAGATATATTTGTTGTGTTGAATGTTAATTAATTGTTCTTCGAAA
CGAGGTTAGTAAGCCTTTCCATTGATACAAAATATGGTATTAGAAAATTG
GTGACACGTGATTTAATATTCTTGTTTCTCTCCAATGAAATAAAGACATG
CAAAATATCGATACCACCTTGTTCCAAGAAACAAAAAACTTCTGTATATA
ACATATTGGCAACTTAAAAGTTCTGTTCcataaatttcaatatttttaaa
gcCCCTTtgtaataatttatttattatctAATATTATTAACATCGTCTAT
ATAAAGCTTTCCACTTCGAACTAGTCTGGTAAATAACTTGTACCATTCTT
TGAACTCGTATTAGGCTATTCTAGAAAAAATTTATaacccctatgttgag
gaggtgacCTCCCtagatttttttctaatttttcagaacccccttggatt
tttttctccNtcaattatttttttgtgtaaACTTTTTTGGGGATTTCTAA
TTATCACAATAATCTTCACAAAAGCCGAAAAGCTCCTCCTTGGATAAATT
GCGTTGGCCATATTTCCGATCAAATTACTGAATATTGTATGTGTTGATTT
ACCTAGCTTGTGAAAACCTTTCCCGGAAAATTCAATTAGTATTAGAAATC
CTCTAATGATGGTAATGAAAAATCTTTGttcacaaaaaataataatttta
ttttcctttttcttcagCTAAACCGAAAGTAGCAAAATGTCAAGATGAGC
CATCACAAAAAGATTATTGTCCACTCTACGCCCGTTTCTCGCTTTGTAAA
AGTAAACAGATACGAAAGAACTGCCGACACTCGTGCGGTGCATGCGACGA
ATAATGAACCAAAAACGaaccaaaaacgaaagtgaaagtggtcTTGAGGT
GACGTTTAGATGAAATCTTCTAATTTGTTTAGATGACGTAATATGTGACG
TAATGATGACAAATCGTGCGGTCGATGGCGTACATCAACGCCTGACCGCG
CGATAATTCTTTAATGGATGTTGTAAAACGAATGCGTACCCATTTTATGG
GATCGCTAATCttctaaatgttttttgatgacaacacgcaaaaaattaac
atttttggtaaaattttgcGAACAGATATATTTGTTGTGTTGAATGTTAA
TTAATTGTTCTTCGAAACGAGGTTAGTAAGCCTTTCCATTGATACAAAAT
ATGGTATTAGAAAATTGGTGACACGTGATTTAATATTCTTGTTTCTCTCC
AATGAAATAAAGACATGCAAAATATTGATACCACCTTGTTCCAAGAAACA
AAAAACTTCTGTATATAACATATTGGCAACTTAAAAGTTCTGTTCcataa
atttcaatatttttaaagcCCCTTtgtaataatttatttattatctAATA
TTATTAACATCGTCTATATAAAGCTTTCCACTTCGAACTAGTCTGGTAAA
TAACTTGTACCATTCTTTGAACTCGTATTAGGCTATTCTAGAAAAAATTT
ATaacccctatgttgaggaggtgacCTCCCtagatttttttctaattttt
cagaacccccttggatttttttctcacaatttttttggaccacccaggat
tttcaacccgattttactgaccaccctggattttttcattcaaaaaacca
gaccaccttggatttttaattttccagaccaccctggatgtcacacctcc
tcaacatagggggtacagactattacTGGAATAGCCCATTCAAAAGTCTT
TACATTCGACTTTGGATGAGTCTTTAAATACTCAGGTTTGCAAATTCTTG
GGAATATTCGAGACGGTGAATGGAATTCTTTAAGTCCGTGAAATTTAGGA
TTCTTCTACAGGCACTTTTGCCTTCTGCAACCAACCTAGACTCTAATCAT
TCTTCATCACCGATCATTATCTATCAttaccaaaatttaaaaagcatttt
tattttacggGAAGAACTTTAGAATTTTAACTTTATTATTTTTGACGATA
TATACCTTTATGTAAATAAGAAAGAGACTTTAGCTGACggattttttttt
agattttatataTTTGTTGTTTTGTAATGTATTTGTAGTTTATTCTCTTA
TCAATATTGTCTTGAATAATTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014113TCONS_00014113Clytia hemisphaericatranscript
TCONS_00014114TCONS_00014114Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014113-proteinTCONS_00014113-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000181supercontigsc0000181:340485..344106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.03	4.7	3.67	2.44	5.11	3.38	7.71	10.03	13.7	9.28	7.75	12.89	130.57	145.12	46.08	36.82	33.82	39.38	268.17	179.24	28.91	31.68	14.69	14.79	16.05	16.7	5.38	4.54	5.73	7.17