XLOC_007943 (gene) - C. hemisphaerica

Overview
NameXLOC_007943
Unique NameXLOC_007943
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000183:100872..103999+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007943 ID=XLOC_007943|Name=XLOC_007943|organism=Clytia hemisphaerica|type=gene|length=3128bp|location=Sequence derived from alignment at sc0000183:100872..103999+ (Clytia hemisphaerica)
AAAGGGATGTacaaaatctgcaaaatctgCAGAAAGTTTTTGATAAGGAA
ACGAGTGTTTTGACACACAGGACAGATAAATGTCATCCATTGCATGACAC
AAAAGTTACAATAATCTTGCTTGATTGAGAAAGGAAGAGTAATATGTTTT
AGTGGAGAAAAGATGATAACCACAAAAAATGATAACACAAAGAATGAGAA
TACAAGATAATAAACGGCGGAATGTTACCCATTATGTCCGTCGATTAAAG
TGCAAAGGGCGTCCGTCCTTGAACATCGTCATCAAACGTACCGAAAATAA
CAAACTACacgattttttataaaagctgtttttaaaattcattaaaaaaa
atgtacTGGTTATtgttaaaaaggtaaaaacttttttgtattaTCAAACC
ATTTCTCGAGGAATTGAAGTTAGAAGTTTGATTATGGTTCTGAAGACTTC
AGGATTTCAACTATAGGGGGCCTATAAGGGGCCTGACCTTCAAAACAGAA
GCTTACAGTAATTGATATTTATTCATCCCTTCCTTAAAAACCTTCTCAGG
TAGCCACCAAGAGATTCAAGGTCAATTTATACTGTAAATGTGTTGATTTG
TATAAATGCTCCAACCTAGCAACCAAGGAGAATGTTCAAGCGAACTAAAG
GAGTgcaagtaaaaataaaattttatttgctgtaGCTTGAGAATAACATG
AGATTAAAAATGTTTGTCGTTGACATAAAGTAGGATGTTAAAGTCTATAT
ACTAATCAATCACTCGTGAgtgtttatttcaaatttacaaGTGCTGGTTT
GGATCAATTTAATCCGAAAGTATCACATCAGATtttttttggttagattt
tttCATCCGAGTGTGTTAGATGCTTTTATCTCCAGAAAAGCATATANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacgtactttcaa
cacaaaaagtttcagccttacactccaactaaacaatgagatagagggta
ccactttttattgtgggttttaaggggtatccactggtatatTATCTGTT
GGTATCTTTGTTTCTAAAGAGACGTAGAGTCCATTCACAAAGTGATCTTT
TTATAGAGAATGATTTTACATGTTTTGCtgacaatattttttctctttaa
GCAGGTTCTAGGCATATTGCCAAAATATACCCGGAAAAAAATGTGTTAGT
GTAAAAGTAAAACTTTGACAGTTTTAAAAACACGATTCAGGAAACAGGAA
AAATATGACTTGGATATCTAAAAATAAGGATGAACTTTTATCTTTGATGT
ATGGTACAACCGACTGGCTGAGAAACATAGCTGCTAATATATGTTCAACA
CTTATCGAACTAAAATTGCTTGTCTAGACAACATATCGTTGAGCTTATCT
GACAGTCTACaagtctttttataagaacatccaaaatcttgaaagctttt
aagcctaaaaaagttcttaacctgttcttattttcactatacTTTGAGAG
TGTTTTTCTACTATTTCCTAAAAAATAGAGTCCGGAATGCCTTACAAATG
TACTCAATTTGTTTACGATCATATTTTGGCTATAGATGCCTTATGCTctt
tatttagtttgttcttataaaaaaactaagTTCTGCCTGTTCTAATTTTA
ATTTAAAGGAAAGAGTAATGAAACTTTTCGACGAATAACGCAAATTGGTT
TGAACACAAGAAATTCGAAACTTACTGTGACAGTGGCCNTAAAAAAACTA
AGTTCTGCCTGTTCTAATTTTAATTTAAAGGAAAGAGTAATGAAACTTTT
CGACGAATAACGCAAATTGGTTTGAACACAAGAAATTCGAAACTTACTGT
CACAGTGGCGTTTGTTAATTGCACGACATCCAGTAGAATGAAGAGTAAAA
ATGCCACAATGCTGGTCAGCGTACTGACGATCATCACCAAAACACGTGGA
TTGCCTGTCATCTTGGTGGAATACTGAAAGATgaaagtatttaatttttt
aatattaattattttttatttaattcttgGTAAATTATAATTTGCTTGAT
TGGAGTCTTTTGTAATTAGTGTAATGCAGTGATATAGCTGCTATAATAAG
AAAGTTATTACGTGATAATATGAGTTTAAACTGTATAGATTACAGTTACA
CTTTTCATTatctatttttctaaattttaaatgcTTGAGAGCTTTTATAA
TCGTCCAAAATGTTCCAAAATTCTGAATATCTTATCTAGTATGGTCTAGA
ACCACTAATTTATCAATAAAATACTTTGGCGCATGTTTTTTAGGCCGAAA
ACTTCAAATATATTTCCGtctaacaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014189TCONS_00014189Clytia hemisphaericatranscript
TCONS_00014190TCONS_00014190Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:100872..103999 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.31	0.51	0	0.06	0.16	0.07	0.28	0.67	1.3	0.15	0.38	0.94	0.82	0.77	1.86	1.28	0	0.13	12.32	12.5	3.77	5.17	5	3.61	0.38	0	0	0