XLOC_007956 (gene) - C. hemisphaerica

Overview
NameXLOC_007956
Unique NameXLOC_007956
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000183:105091..108814-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007956 ID=XLOC_007956|Name=XLOC_007956|organism=Clytia hemisphaerica|type=gene|length=3724bp|location=Sequence derived from alignment at sc0000183:105091..108814- (Clytia hemisphaerica)
ATAATTTGTAGTGAGTCTGCCCAGGGTGGACGATTCACTGATCCAGGCAA
CATGGGTGTTACACGTGACTATTCTGGGTATAAATATGAGTTGTTCACTT
GACCAAAGCATCACTTTTGAAGGAGTTCTGAAGACTCGCACATTAGCTGA
TATACATCTACCACCTCACAAAGTAAGTCACATTACATATCTCTTTTTAC
GCAATATGTTCCTCTATTTTTCCAACAGTGTCCTCTTACTGAGCTACTTT
GAAATCAATGGGTTTGAAGCAAGTTTCAACCTTTTAATCATCTATACCAG
AGATTGGTGCGAGTTTACCAGGAAGGGATGATCAGAAATCTCAGTCTAAG
AGAATTAATGCAACAACTTCAGATATCAATGAGATCAATTAGTGTGGTCA
ATCCTACCTGGTAAACTACAACCCAGTCTACACATAGTAACAGCAAAATT
CAAAAAAAATCTTTCGCAATGTGGTTCTAGAATGGACATGAGCTCATTCA
ATGTTGGCGCTCTGATTTTCAACAAAGAACTTCCTTTTGTCGTGGAAGTT
GATTTTGACATTGATGATCACAAATTCTCCATTCGTGGCAAAGGTGTTGG
CAATGCTGAGAAAGGATTGATGGTTGGCAAATATGTTGTTTCCGAAGGTG
AATTACCATGCTCATGGTCAGCAATCACTCATAATTTCCAATACGGACAA
GTGTAAGTAGAGCTTTATTTTAATCGTACCACAACTCTACTAGTGTCAGG
TCCTTCACAATGTGAGCAAAATTGACTAGCTTAATTGTTAATTTGATCTA
GATGGAATTTAAAGCTCGTTGGATAGAGTAGGACCTATCCTTTTCATTTT
GGGTGCTTTGATTTAAATATTAGCACAGAAAGAGTTAAATATAATGTGTA
AAACAAATCTTGGAAAGTTTCTCATTTACAAACGCCAATGGTGCATTATT
ACACTATTATGAAAAAAGAATTATGTGTTTAAAAAAGACTTTTCAAGGTC
ACTTAGACTCAATCGAAAATGTCAATTTTAAATTTTAAATTTTCTCTTTC
CCACGTTTTTAGTTGTTTCACCCGTTACCCAAAAGATATACCTGACCACA
TCAAGAGTCTGTTCCCAGAGGGTTACGTCCAAACACGACACAGTCATTTT
GTCGATGATGGAGAGTATACGTCCGTACATACGTTAACGTACGAAAACGG
AGTGATTTACAACCGCGTCAAAGTTAACGGTGGCGGTTTTAAACCCGATG
GTAATGTTTTTGGCAAACGTCTTCGGGAAGTGGAACCTGATATCTGTTCA
GTCTATTTCCCGGGAAAAGATGGATACAACTGTGAATTTGTCAAGGTACT
GAAATTTTGTCAATTCTAGTAATTTCAGATACAGTTCTACAGGGGTCTTA
TTTAGGCCCGGCGAACGGCACGAAAAGGCACGAAAAAATTACAATTCGCC
GTTCGAAAAATTCAGTTCACCATCTAAAGTACATATTTACGCTAATCAAT
GCACTGCGCTTGCTAAAAATTCGCCGGCCTAGAATCTAGAAATCGCCAGA
GTTAATTCTTCATTCGCCAGCCTTCCAAAAACAAAGCAAAACCCCTGGTC
CTAGCATCTTTCAGGAAAATATTTTATATCTGTGGAGATTAACTGGCAAT
AATTCAGTTTCAGTTGAATGTTTGAGATGAGAATAGACTGCCATGTTCGC
TAAGAGGTTTTTTTGAATAAATTTTGAATTGAGAAATTTTGTTAGTACAG
TGGTGCAAAAAAAATNTCGATAAGAGGTTTTTTTGAATAACTTTTGAATT
GAGAAATTTTTTTAGTACAGTGGTGCAAAAAAAACGCATTTTATAACCAG
TAGCGTGGTGGGTCGACTAAAATTCGGCCAAACCGAAATTAGTAATCAGA
GACTTTTTACACCCTATGTATTTCGGTGCCCCCAAAGTAATTTGGCCGTT
GGGGCCATCACGCTACTGTTTATAACATGTGTATGACCAAAGTTTAAGAT
TAGAAAATCTATATAAAAAGAGCTGAAACCTGTAAATATGTAGTCATCAT
ATTCTGGTTTATATCCTTATCTTTCACAGCTTTCGGAGACGGTAGATGGC
GATTATCAAGCAATCCGTATTGACCAAGTGATCAGACCTCTTTCAGACGG
ACCCTCCCTTCCAATGACCAAGCTTTATCATCATTACAAATTCGAATACA
GTAAGGATGCCAACGAAACGAGGGAACACATCATCATGAAGGAACAAGTC
CACGCTAGTCACCATACCTCTAAATAATGAGATATCAACTTTTATTATTG
GATTCTCAAGTTTAATGGTTGTTTGTCATTAATTATATGATATTGAAGTT
TTATATATCTATTATAATCTGCTTGATTCATACTTTATTTTCATAGTTGA
AATAAATTTTATATATTTTGCACATGCTTATTGGAATTAAAATGTTTCAT
ACGCCTCAAAAATTATTCCACCGTCAAATATCTACCCGAAATTTTGTGAC
AAGATTGAAACAGCCTACTCTGAATTTGTACTAAAATTCCTTTAATTAAA
AATTTGTACGTAAAAATCTCAAAAAGGGCGTTTTTTAAAAACATTCGGTA
GAGTCTATTCCACGGTCAAAGGGAATCATGGGTAATCAGGACCCCGCGCT
CAAATAAAAATTCTACGCCCCCTCAAATAAACACTCTACGCCTCCTTTAG
CATGTAGCTATTAGTATAATATCAAGAAAAGTGGATCTAGTAGTCTTCTA
ACTGATTTTGACCCGTTGCTACATTGACATTTGTACTCCAACAATAATAA
AAAGGCAGAATGGGGTTCCCAGTCACACGGTATAACATTTATGACATTAT
GATTTTGAAAAGCTAAATGCTTTCAATCTTCTTAGATGTACAAATACATT
CCTGTTTCTAATCTCGAGTTGGTGTTGAAAACCCAATGATTGGGTGTGAA
TCTTTATAGAAGAGAAATTGTTTGTGTTGAAACTTTGAATAAAAAGCCTT
CAATTCTTATTTAGAATTGTTCTGAATCTTGTTCTGAAGCTTGGTGCTCA
TGCCACGCCCTATTTTGATATCTGTTGAACATAATAATCGATAGAAGGTA
TTTTCTTGAGCACTAGAGTTTATAATCAAATCAAATATAATTATAACCGA
AAAATCGTTGTTTCTCTGGTGCAACATTTTACCCACCAGCAGGGATGATA
AAACTTATTATGTTAGCTACAGCACCTGACCCCGAGGATGTAGGTGAAAT
TTTAATCAGACCTGAAAGATGTAGATTTGCATTAAAAAAAATATTATATG
TTTTCAACGAAATTTTGAACCCCCAAAATCCTTTCCCAGGGGCTAGTTTC
ATTACTTTTGATAGATAGGCTAATTTTTTTGGTCTTTGAAGTTGACTCTC
ATTTTCGTTATAACCCCCAGAATGTAGGTTTGGTTTTATGGCTTTAAATC
TAGTATCAGTAAAATGTTGATATTTTTTCAATTGGATTAATTATAACCGT
AGATTTTAGAAATATTTCATGCCAAAACAATCCTCTAAAGAGCTTTTTGT
TGTTCTGAAAATTGGATTTTTTTACTTTTTAACCCCCAGAATGTAGGTGA
AAAGATTCGGTTGTCGAGAGAAGAATTTCAGTACTCATCGGAAATTTTTG
TTCTCTAAGTGAAATTCGTACTTTAGAAATTTACTCTGACAAAAAATTAA
CAAAGATATTAATTTTATCGTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014226TCONS_00014226Clytia hemisphaericatranscript
TCONS_00014225TCONS_00014225Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
green fluorescent proteinTCONS_00014225-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:105091..108814 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.5	7.11	21.58	11.33	1.3	0.82	1.07	1.12	0.74	0.25	0.66	0.67	0.46	0.59	0.4	0.41	4.34	1.52	0.28	0.42	60.09	64.51	1197.1	1141.19	827.54	794.67	25552.29	18792.34	115.57	87.37