XLOC_008158 (gene) - C. hemisphaerica

Overview
NameXLOC_008158
Unique NameXLOC_008158
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000190:393351..402042+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008158 ID=XLOC_008158|Name=XLOC_008158|organism=Clytia hemisphaerica|type=gene|length=8692bp|location=Sequence derived from alignment at sc0000190:393351..402042+ (Clytia hemisphaerica)
GTTGGAAATGGGAATTTCGCGGCATTTTTGCACATGTATGACAGTGAATT GATGGAGGGCGAAGAAGAATTCTCTTGGGAGGAAGAAAAAGATGAACTAG GTATAAAATCTCGTATTTTTAATGAAAGTGGATCTAAGCTTGTGGTACTT AGCCACTATTTGTACACCACACTGTAAAAATTTAGCACTTTTTTTGTGAC ACCAAAGGGAAATTTAAAAGGATTCCCGTTGATgaatttttgatctagaa atgTTATTATTCAAATCCATTTTCTATGAAAATTATCTCTTTTCTACGTC GAAAATAGTAGCTTTCGTCGAAGGAAAGCTGATGATCCTTATTCCAGATA TTCGGGTGGATATTTAGAATGATATTGTAAACTTAGAATTGGGGGTCTAT CGGGCTCATGAGAGAAATTACTGAGTGGAAAATTAGAgttttgtaaataa attttaGCAATAATTGTAGCCTGATCTCCGAGCTTGCTAGATAGCAGATT GACCTCCATGTTCTTTCAAATCATTCAGTTTTTCATATAGTTTTTTAAGA CTATAGCtcctaatagacctttttaacaaattacgttacgaacatcactt gccttgttttgaaattattaccatgatgattaactcccagcggattttat caaaacCACTTTCTATGcataaaaaactcatttttttgtcTCAAGGGCCa aaatcaccatggtaattgtttggaTACTGAGACaagtgatattcatgacg taatttatgaaaaggtctatatcgGGCACTCCTTTTTGTGAACTTATCTG CTTTATATTATTAAATTTCAGATGAGGAATATGATCGTATACAGTCCGCA TCACAAGATCGTATCAAAAGTTTGGATGAGAAGATTTTGGAGACTCAAGA ATTACTTGAAAAACAAATTGTAGAAATGGACATTGCTAAGGATTTAGTAC gttcgtttttttttgttttttttttgtttctaattCAAAGCTTGATAACA TTTTGTTCGCAACTCTTTGTACTCAATACACGCGTGTTtcgatttaaagg ttttgtttttaaataagagtgatatcgtttgcttactcatcaatcttAAT TCACAAGATTTTCGCAAGCTTGGTcagaaaaggaaaagaaaacatttttt tgcttaccagcataatataacaattaggcagacactgtcctgatatgaaa tatgtgtctgataagaaacgggaacacttatgtaaaaataaaacctttaa ttttatGCTTTGATCCCGTTTGATTTTCAcgataaaatatcaaaaaaact ttaagatTAGCTGAAAACTGCGCTCATCGATACAATCTGATTGATTTTTC GTGTCAATCCCACGGAATCATAACGAAAAAATGATTCTATCTCAAAACAA ATATTCTCGATATTTTTGCTTATAGCCAGTGCGCCAAACAGGGTACTTAG ATACTGAGTTAAATCCGAAATTGGGTCTTACAAAGaacgtaaaaaaaatt atacttgATCTCTTCCTgcctgtaaaaaaaattcagggAAACGTGTTGCG CTTTCTTATATCCCCGGGCACGACAGCATCAACTCTGGGATGGCTTTTAA GTCACCCTTAACATCGATTTCAATCTTATGATCTTATGtacattattttt ctttcagctCAAGAGTTTCCAAGTCAAGATTGACCGTGCATGTATTGAGA AATTGCGTGCCTACCAAGCTCCTCCACCTCTAGTGGCTACCATTATGGTT GCCTTGATGATCCTTTTGAGACGACCTGAATTCAATCATTACGTCATCGC TGCCCATAAAGGAGATAGAAAAACGGATGGGTCTTACAGTGAGAATTCAT ATTCGAGAGTTGGGTCTGGTAAATCGAGAAATAAAGATACAACCAATAGA ATGTTTTCTCATTTaggtttgttgatttttataaattcgTGTTtctttta cacgctttttttaaagaatggtTTAactccatttcatcatggatattctt aactttttggtcgAAATCATCATACAataatattcttaacatattttcaa ggttaatttttagattttatcagTCATAGTCTTAAAATCNTAAGAATGGt ttaaatccatttcatcatggatattcttaactttttggtcgAAATCATCA TACAataatattcttaacatattctcaaggttaatttttagattttatca gTCATAGTCTTAAAATCGTCGATGGTCTTCAAGTAATTAGTAAAAGGAAG TAAAAAGCGTGGAAAGGAACAGCTATAATGAAGATGAAATAAAATAGGTC AGCTAAATCAGTTCGAGAAGATTTAAGATgcatttgaaaatatattcata aaaaaacaaaattgaaaatttttatgatggtgatattctttatattctta attttttggccattttcatcatggacattcttataaagtgtatgcttcta aaaaaaaagcgtgtaacttCTTATGTCTGGGGATTCTACTNTTCATCAtg gaaattcttataaagtgtatgcttctaaaaaaaaagcgtgtaacttCTTA TGTCTGGGGATTCTACTCTTGAACGTAATGTGAAGTGGTAGACCAGCGGT TAATATATCAAGATACCATTGCAAAGAGAGGAAAACCTGTCCCACAGATT GCATTGATCACAAATCCTAACAATGTCAAATTCGTAAGAGAAAATCTTTC AAGCTTGTTAAACCATGCTGGGTAACTCAAATACTATTTTCGATAACATT TTTCTTGTAGGAGCTGATGGTCGTGTTGATAAGACCACGTGGAAATCCAT CCAACTGGTCATGCAAGATACACAAAAGTTTTGTGAACACATGAACAATT ATAATTGGTGCGAAGGCCTCCCCGTAGATGTCTTGAATACCGTTTGCTCT TATTTTGCGCCCGGTGAAGAAATCCCCACCAGCTTACGAACAGCACAGCA TAATCTGTCAACCTCACAAAAAGGTACGCTCCAAAAGATAAAATAATAAT GAATAGAcaattgttttcattcaaaggAACTGCAATCTCGGACAAAAGAT TATAGACTTATTCAAGAATGCATGAAAAATTCAGAATAAGCtctgaaaac ccatttttaccaGGGCCAATgctgtttttattgaatttggAGAGTTGGGG TGACAATTCCAGAAGCCAAAGCCTTTCTTGGCACTATtgaggaatttttg aaaagtctacagttcttttgtccatgattgtgtACATAAGATGAGATAAT TTGACATCATTTTTATAACAACTTAAAAAAGATTCCTCAAAGTTCTTTGC GAACAGACATTTTCAAGGTTCAATTTTTCTGGGGTCGTTACAGTAAAGTT GTATTTATATTGTTCTTGAAGAAAACTCGTCCCTTTGATTTTAGAGTAAA GAATCTCTAAATCTGTTGGAGACGGCTGGAGACGTTTAGAACACCTGTTT ATTGACTCTTCAACCCCGAGTGGCGTGTATAAACGCTCAAAATCGGCCAA TATACCCAGGTCCATAATTGAAGCTAAAGCTTCAGATCACTTGATTTAAA AGGGTATAAACATAGAAtgctttttgaaatattatgtAGATACCTTTCTA ATGGTATCGAAAACCACTCTCTAATTCTAAGTTGCAAGTATTTATGCCAG TTTAAGTTTGAGTTTGGAttacaaaattatatttttcaaaaaaagtttgc gcgctggaaaggttaatcaGATATCCGacaagaaaaatcgaaaaatgaaa tCGGTACTTTCAGTCTAACGTGCTAAATaacattgagtttgaagcctcga atgggctagagaggaatcttcaacctttctccagcaaggaaaagtgaagc cttaagttcGCCCCGTATTtcgaaattttgtttgaaagacACACGGATca cgcgttctggatgggaaataagtggcttcattccAAATCTAGGAGTTTCG GATCTAGCCCCTTAAGAGCTTTGAAATTAATGCTAACTGAGTTGTCACTA TTTTTCAGATGAACGGAGCGCTGGAATCACATTACACGCTGCTAAATATT CTTCCGAAGATGCTGCTCAAATAGTTGAATACATCCAATTGGTTATTCAA TTCAGCCGTAAATACCAACCGTACATGAAATCTGTTCAAATGTTGGAAGG TTTGAAACAAGAGAAAGAAGACCAGACTGCTTTGTTGATGGCACAAAACA TGAGACCTAGTGAAGAAAACGTCAATGATGTAAGTGGCTTCAGACATAAT TTATAAAAACGAGTAAATTGTGGGTTTGGCTTAGGGtaaaaattgaatat acaaTATGATAAGCAAAATCAGGGATCGCAAACTACTACTTTCTTGCAAA GGAAAAGGTAAGGGTATCTCTCACGGTGAAATTAGCATTGAATAATTCCT ATTTTAAGCAACTTTTGACCCTTAAATTGAAAATCTTGGTGTGTGCCCCG TCTCAATAACGAAGCCCCTTTAATTATGAATCTCAATGacatccaaaaaa ttttttaagccaaaaaaaccATATTCAACTTAGCCATCTTAGACATAATC CTGCTTGGCTATAAATCGGTCAACCAACTACGATGTTATAGATGGTTAGA GAATTATAcatggatagcccagtaatcttggactttaagtcatttttgga cctaccccggtggaggtcctataaattaacctctgttcgttcgttcgttc gttcgttcgttactagcttttctcgggattggctcattagttNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttc cggttgaaaattccggaaatcgccgtttttgcatattttcattggatttt ttccttatatttctatgtttttcacacaaaaacattattgataacaattg ctcaccatcaagcatgattcaattgtcaataaaactgatttttgcgacca gaactttctatctattttttccctacaacccttccctctcccctaccatc aatcaatgatgaatttcttgcgttatgcattttcgctaaacgctatgtat tctgactgatttttttcatttttctccttgcattgctatctaactttcat catcaggtaggtccattcagcatctagcttgtttctattgtttttgatGG ATCCACGACTGCAGCCAGCTAtgtatgaactgaacggaataTTAGAGGGA ACGGGGATTTAACCGGGAACCCCTGGCTTCCAACGCTGACGTTTTAGATC ACTTGACCATCGCTCCATTATATTTCCCTAGGAACAATTTGATGATTCAT TTGAAGACTATACTGAAGATGATTTACCACGTCTTGAACAAGAAATGGAA GAGATTCTATCGCGTTTTGATGCTAGCACCATCAAGAAACATAAATTGAA TGAACAAATCAAAGAATACAGTGTGTTGGTAAATTCAACAAACTCCTTGT TTGACAGGTAAGCATTTATGTTTTTTATATTTTATCATTGTGCTGTTGAA TGAATAGCGACCGTAGCATGAAGGTAGAGCATCCAGCTACGATGCGCAAG GTTGTGGATTCGATCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGT ACTTGATGCCTCTCTACTTGATGCCCAGCTACTAAAGAGACGAATCAAGG GTAAGCGAAGAAATCCAGGGAAAGGAGTGGCGCTCTCCCCTACCTTCGGG TAGacagctatacgaaaagggagccttcgggtcgccctcgactgcggtcg caaacttacttacttatagtACGTTGAAAAAAATCTAGTTTTTCAACTGT TTTCCTGTCTCCTTTGAATTGAAAACTGGTAAAGCTATGTTTTCAGCTCA AAATTAAAGTGGCAAGATAGAAGGTTAAAACATTACATATCACTGGCTCA TTTGCACTCATTGAAACCTAGGTATTGTTGATGTTATAAACATAACTATA TTGCTTTAAATAGTCTGTTGCATCGTAATGGTGTATAACACCCAACAAAT TTTTAATAGAAAGGAAGGATGATGTAACAAGCAAAACTGTTGTATaaata aaacactagatagagctactctgttcCTGACCGGAGCAAAATAATGCGCC TTCTTCGCTGAGTAGACTACAGTTTGGTGCGGTCAATTCGATCAATCACT ACCATTTTCTCACCTACTCATTTCCTGCAATGTcagttgttttttctgat tggACAATTCGCCGGTATCGAACTGCAGTCTTCTACTGTAGCAAAGAtag cgcattattttgcttcaactgCTGTGGCTTGAGAAagacagagtagctct atctagtgttttatataagatatttgTGATAAATAGCAAATGTCATTTCC ATATTTTCTTTTCCAAGANGGGGGGGGGCCtagcaaagatggcgcattat tttgcttcaactgCTGTGGCTTGAGAAagacagagtagctctatctagtg ttttatataagatatttgTGATAAATAGCAAATGTCATTTCCATATTTTC TTTTCCAAGATTACATGATTTGAGGAAGTGTTGGGACAAACAAAGTGAAT GTACAGCCACCAGGCAAGAAAGTCTTTTGGTGAACGTGATGATCGCTGCT TCTTATATGACTTATTGCGGCACTCAAAATGTCGACCAAAGGTGTGTGTC TCGATTTGATGTTTAAAGACAAATAAACGCCCAATCTCCTTACCCAAAGA TGCCTCCCCTGTTCAAACGGCAGGGATTAATGTACATTACCGGTAGAAAT ATTGTCGGTAAAAAGTGACCACCGAATTttttaccgacgaatttttaaaG CCGATGAATGATTTTGACCGACGAACATTTTTGACGGCGAATTTTCTACC GATATAGTAATTAATGAACGTAATGGGCCATTTGGGCGACTGGGCTCctc aagaaaaatatatatcattTTTTGGGCGATTAAGCGATAGTTGATTTATT GCCCTTCCCCTCGGATAAGAAGTCCCCCAAGACAAGGAAAACCTTATCGA CTTGTTTGCTACACATGGTCTGTTGATTCCTCATCACCGCTCCCCCATGT AAACTCGTTTCttgaactttttgtagaaaagaaCATGAAATCTTTCTTAT AGAAATGTCTCATTGAAGGAGTTGTTGAAAGTATTTGATGAAAACGAGTT AAGATACGACGAAGACGATTTAGTGATTACCCACAATCCCCTGCTATCAT TCCTTGGTAGTAAGGTAAGGATAACATACACTTTCAGGTCTTATAAGAGG GATTTATAAAATAAGGTAAATTTTCGCATCATAGGGTTTCTTTGAAAAAC TGCGATCGTAAAAATCACATTGATTTTTCAGGCTAACTGTCAGCAATTGT GACGTAATTTTNGTAGAAATATTGTCGGTAAAAAGTGACCACCGAATTtt ttaccgacgaatttttaaaGCCGATGAATGATTTTGACCGACGAACATTT TTGACGGCGAATTTTCTACCGATATAGTAATTAATGAACGTAATGGGCCA TTTGGGCGACTGGGCTCctcaagaaaaatatatatcattTTTTGGGCGAT TAAGCGATAGTTGATTTATTGCCCTTCCCCTCGGATAAGAAGTCCCCCAA GACAAGGAAAACCTTATCGACTTGTTTGCTACACATGGTCTGTTGATTCC TCATCACCGCTCCCATGTAAACTCGTTTCttgaactttttgtagaaaaga acatgaaatcttttcatttattttcttatagaaATGTCTCATTGAAGGAG TTGTTGAAAGTATTTGATGAAAACGAGTTAAGATACGACGAAGAAGATTT GGTGATTACCCACAATCCCCTGCTATCATTCCTTGGTAGTAAGGTAAGGA TAACATACACTATCAGGTCTTAAGAGGGATTTATAGAATAAGGTAAATTT TCGCATCATAGGGTTTCTTTGAACAACTGCGATCGTAAAAATCACATTGA TTTTTCAGGCTAACTGTCAGCAATTGTGAcgtaatttttagaaaattcat tgaaaagaaTGAAGCTAGATTTCGCCTAGCATACAATGACTTTCGCTTAA AGTGTTGAATTTAGAATTTGGACACTGCTTCGACTACGGCATTCTTCACA TTAACTTTTTCACTCTAATATCCATTCACTCGTTCTCTCTAATATCCATT CACACAGTCTGAAAGCAAACGATTCGAATTGAATCAATTACCGCAGCATC CACTCTCAACGGAACTTGCTTGCATCTTCACTAATCATCAATGTTACCAG AGCTGGACGTTGCTATGCGACCCCTACCATATTGGATTGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014580TCONS_00014580Clytia hemisphaericatranscript
TCONS_00014581TCONS_00014581Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014580-proteinTCONS_00014580-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:393351..402042 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89 0.92 1.51 0.84 9.75 6.19 4.92 6.59 2.65 3.99 2.48 4.06 1.37 0.82 1.32 1.08 0.35 0.6 1.4 0.78 1.14 0.84 0.53 1.52 22.33 15.97 2.46 2.62 0.52 0.8