XLOC_008183 (gene) - C. hemisphaerica

Overview
NameXLOC_008183
Unique NameXLOC_008183
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000191:359208..366422+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008183 ID=XLOC_008183|Name=XLOC_008183|organism=Clytia hemisphaerica|type=gene|length=7215bp|location=Sequence derived from alignment at sc0000191:359208..366422+ (Clytia hemisphaerica)
GGAATTCTTGTTTTGGCGCTCCATAAAGGGGCGCCGATTGCcactatttt tattttacgtcTTCACTTCAAGATGGCGACAACTTTGCAAGGCAATTCTC AAACTATGTCGACGTTCACAGTTTTAAGACACCTTTTTCTTGCCATATCC TTTGGTATTTTTGGATATTACTATTACAACAACTATCTCAATATCGAAAG ACAACGTGTGAATAATGTTTTACATGGACTCTTACTTGAAGAACGTAGTG TGAATCTCTCAACTGAAAAGGCCGTTGCTGTTGGTTTTGGAGCTTGTGTT GATCTTTTTGTTGATGGAATCCCTCTTGTCAATGCTCTTGGATTAAAGCC GCCTAAAGAAGCAAAATATCACAATAATATTCAATCATTGGAAGATGTTG CAGAAATGTTTGCTTTCTTCTTATCCAATGGTGCAGCTGCAGAGTAAGTA CTTTTTTTAATCCTTGGTTctttttattcatgatattcatgattgGGCTC TTCTAGTTAAAGTCCGTTACAGGGGGGTAGATGACGGCGGAATTCCgagg caaaatttttttttgaaatttttggatttccaatacaaaagcaattgaaa ctcctggatttccaatacgaaatctggaatttccgatacttttttcaaaa ttttgacgaaTTACCGTCaattgctctaacttgggactatctgacaaaac atgagacggcaatagaccttttttcaaagaggccaccctgctgaataatt atgtagtccagcagaaaaacaatgataaaaccatgcataataattacaat atgcatgatacagtaattatgcatggctctatcattgttttcatGGCTGG ACttcataattattcaacagggcgtcctctttgaaaaaaggtctattcgg ccaccatttcaccgaacctccaaagtcatttgatttgagttaagcaacag cgtatttaaaaatacacgatctctcttttgattttaggggccactcacat atcgatttttcCTACGCTTATAGCGTCATGTCGACGCTATAGGGTGGGTG GGTGGTTTAGATCGAGTGACGCTAAGAAAATCTACTAGAGATATCGGTTT TTGAGGCCAAAGAGAtgttcaaatttccagaaaactaTAACTTCCATact tattattttcaattagcACCCTGTTCCCCTGTTCATATTCAAGATTCAAC AAAACATCCTCGCGCTTCTCTTTTTTACCGCATCAAAAATAAGCCAGTAT ATAGTAAAATACCGGAGATGCTATGTTTAAAAGTTTGGGACTTTCCCCGC GTCATAACTTATGCGGGTCTGAGAACCAGACTGTGCAAAAGTCATATACC GAAACCACTACtcgaaaaaaaagcaaaatgtaCCAAGCAGAAGAGGGAAG AAACTTCTCTGGCAGTGGAACATCAATACTTGAAGTGAGAAAGGAAAAAA GGTTTTCATTGGTTTTCGGTATATTTTATAATATGACACTAAGGGTAGGG GGTGAGTGGGTTTTTTGATTAGCGTCGGAATGACGCTAAGCGTGGgaaaa atcgatatgtgagtggcctcttacagtaagtgaaaatacagaccagatat gcaacagtcccatgtttcgaccaatcgtcccaagttagagcagttgacgg tatgtggaatttccaatggttcaaataaaaaaattgagcggAATTTTTga agcactttgaaaaattgactggatttccaagtgttttttttatctgaaaa ttcctGTCGTCCAACCCctatatcaaattttttctggaaaagcccattaa aaatctttagatatgaaacaatagagagaagATAAATCATGTAAACATTT GGCCGACATTTTTTTGTGGCTAAAAATCAGATGAGCTAAGCTATTTTGTA CCGtcgtgaagtcaggtaacttgcatcagtggaggtaaacttgcatagcc atcaaatgactgactaatcaaagcagcaaaatttcaaaacaaaagaatta cgcagctccgctcgcagctccgctcgcagctctactctaccatttttgtt ttgatttaactttgtcattcatttgagggctatgcatgttagcctccact gatgcaaattACCCAATCTAACGGTATAGACCAGACGGtcgtaattgata aaatcgatcatcgattaaaatcgatagctaatcgatattaatcgatGAAC TATATCGATTAAAATCCATAATCGTTAGCTAATCGATATTCACAATTTTT TCGTCCTCGATTAGCTATCCATTGCTATCAATCCAATCGATATTATCGAT TATCAATTTATGGAGTTAGTGAATactgtatttaaaaaagaagtATAATA AAAGAGGTTCTGGTTCATTTAGTTTTgaatagcctggatatccaggctgt aaactatttcacagtctagtttttgatatttttatgttctggtttacagc ctggtctccctagagcgatttgcattctctttaagagaatgcagtccgct tgcttgtgctcacttcgctaaagccgtaagggccaatctacacagcGCGG AGCAAttataaagcaaaaataggatagtcctccagttgctaagtgaagat agggctttctgttacatgaaaacatgaaaaagaagaaaacagaggcaagt tcattttccaagaaaacatggttggtcatgataatgcatgcaaacttttt tatggactttggtgtaatctttggatattttaaatagttttagatcttgt aagactgctttttattaatttctgttttgctgccctgggttgactaggaa acatgggtttgcactttctttcTCTAGGGAGACCAAGCTCTATAATTTTA GAACTTTGTATGTTGAGGTAActtttgttttttctaaaattttgagcttg gatatccaggctaagttTTGAAGTGTTGCTAATTAAATCAAACCAATTGA ATCTGTTTATTCAATCCATAATTCGAACCTCGAAAAAGAATCTATTCCTA AATACCTTAGAGTAAAGCTAAATAAAAAGCTCAAATGGAACACACATACT GATGCTATCTGTAAGAAAGCTAACAAAATACTTACAAAGAAATATACGTT TTATAAGGGTATACTCTCCCATAGGTAGGTTTCAAAACCCGCAGAAATTA ACGTCAAAAGTTGCTACAGGTTTTTTGTCTTTCGACATCTTCAAAGCCTT GAATTGTAATTGTTTATGATAAAAAGATTGTTGTTTATACCAAGCTAGTA TCATACATACTGAAGACTTATACAGTTAATTAGTGGACAAAAAGTATTGC CAGAGCCTTATTTCGAGAACCAATGAAAACCCGGTGTTTTTTGGTAGAAA AGCTAGACTttccttttttgacgttttactgACGGTAGCTTCGTCTGCGA AGGGAAAAGATCAGAATTATCTTCAATGTGAATGCAAAAGTCTTCAAATG ATTTGAAGGTTTCCCGAGGTTAGAAGTACCATAAAAGTCATTTGGAGGAT AAACAAATAATTTTAGAGCAAATTTAAAGcttggttttgaaaaatttgca aagtAACCAAAAGTTGACAAATTTTAAAGTGGTTGTTTTTCTcaggaaaa aaatgtttaaatgtTTTTCTCGATAAAAACCTGGTTAGGACTCATCCTTC TTTGTTATTTGTGCCTAATTACCCTTTCCTCTTCCCCTGTAACGAAGAAC ATGGAAGAATTTTGGCTACCCGTGATTTAACTTTGAATTCAAAAACCata aattgacgtcaattttttatttttatgcgGGTCTGGCTTTAGGCATTATG TCACTCTTTTTATCATAAGACTTGACCAGGACCGCAAATGATTCTGAAAT TTAGCACAAAGAACCGGATTGGAATTTTaaagacacttttttaacaATGA TACGTCAAAATAATGACATTCAAAATcatgtaaagttttttttgggcCAC CCGGTAAAAGTTGACTCATTTGTTCTTCTTCATGGTATAAGAGAGGATAG CCTTGCAATGCCTGATTGAGAACTAATAAGTAAATGAAAATTTGGCAATG CGTGAAAAATGACTATGAAATTGAGTATGAAATGCATAAGCCTAAAGTGA TTCAATTAGAATTAGAAAACTAGTTATGTTCAATACAATAATCTTTTGTG TGTAGTCCCTGTGTGCTTTTTCGCCAGTCTGAGTTTCTTGTCCAATTTTT GAGTCACTTCAGATTTtttctagtgggtctttttggagtCAATATTCTTT GCAATTTCTAACTATACATCCAGTGACTTAGTACTTAGCAGATTCCTTTT TGACAAAGATTTCGGATAAAGATTTTTAttgtatatatttgaataaacat aaacatttaCACTACTTTTTTAGCCTTTATTTATATTTAGTGATAATGAA CATTCATGTTTAATGactacttaaatatatagatagattaCCCCTTCTGT ATTGACgatatttaaaatatttcctgGGGGTCGTTGCTTGGAAAATACTG TGCACACAAGTTTTCTTGCCACTGAAAATGGCTGCCAAATGTTTTGAATC GATGTGTCAATAAACGAATACAtaacgtcatgaatatcataaatAGACCT TCTGCTAGTTtagatgtcatgttgaataaaatcaaaaactccagcCTCAA AACAATAGCACATTAATACATAATTAATATAAGTAGatgcattaactttt tcttgtcattgttggtgctggagtttttaattattcataTGACATCCTAA tttagcaaaaggtctatttcatTGTCCCCTcactttttttgaatgaaaag ttTTCATACCATAAGATGGCTGGCTAAACTTTTTCATTCTCAGGGAAGCA TTGTTATCGCCACTTTACTTTTACAATAGGTTAACATAAAAATCATCACA CTGGGTAGGTACAAAAGTAGCTTCAACTTGATAGCCCGTTGTTTGTTGTC TAACTCATTTTATGCAGCGAAAAATCATCTTTGCTGGTATGTCCAGAAAA AAAGCAACAAAGGATCCCGGAAACGTGCCAGGAATGTTTTCCATGGAAGG AGAATGTTTAGCCTGTGGGTATTTTTAAAAGCCTCTTTTCTAGGCAAACT CAATCATAGATTACTTTCTCAAATATTTAACAGAAAGTTGCTTTGATTTC TATATGGGACAATTATCTGATCAGttgaaaaaatgattgacaactTCAAA CCTTCAAACTTAGTCAGAAAAAAAGACTAAAAGACTCATTTTGTGGATCC TATTCCAATTCAATTTTTCCTATTGTCCATTCTTTTTTCAATTgatatta aaaaattgaaactgaAAATTACATGATTTTGATTATGAAGTACATTTAAG AAAATACTccatattgtttttttttttgcatgtgtTTTTCACATGTTAAG GCTTAATTAATTAAGGCAGTTTTTTCCTATAGTGGTTAAAAATGGTGCTT TCCATGTGTTTTAGCTCAGAAACTGAACGAAACAACCAAgatacttttta tttattttcaggcGATACGTTTCAAACGAGTTGCTGTCGGTCATGGTGGA AAAGGCCGCCCAATTGGAAGGGGCTTATTTGGCGATGGGTGGAAATGCGC CCGTCATCAGCAAACGATTTGCAATCGAAGGATTTACCGTTTACGTTGGT GCCAAAGGATCAGAGAAAATGCGCAAACAAGTTCATAAAAACATTCACTT TTCACAGGGGTTTGGGGAGAATGATGATATTCATTTGATTTTGGAGTATA AAGTTGGAGAACAATGGGGTCCGTATGTTGTAAATCGGGCGAATCGGTTC ATTTTACATTCCGATAAAAACAATCCGGAATTAAGATCTTTGGAAAGTTT TATGGAAGTTGTGGAAAAAGTTCAACCGCAAACTGTTTTGATTGGTGGCT TACAAATGCTTGATAATTTTAAATTCGAAGAAGGCGTCCGCGAGGAGAGA ATGAATAAGATGAGAGATTGGTTGCGTGGTTTACCAGCTACCATCAAAAT CCATTTCGAAATGGCTTCATTTGGAGAAGTGGCTATGATGAAGTCACTGA TTGAAAATATTGTTCCTTATGTTGATTCTTTGGGAATGAATGAACAAGAA CTTCCAAACATTGAAAGTATGATTCGAGATGGAACCATCATTGAAGTCGC TGATTCCAATCCACGAACGGCCACGGTTCTCGATAACCTACGCTCGCTTA TTCAAAATGTTGAACTCGTTAGTCAGCGCGGTTTATCGCGCGTTCATGTT CACACGTTAGCGTATCAAGCCATCTGGACGAAGAAAGGTTCTATGTGGAA GAACACACGTGCTGGGTGCGCTAAAGCCTCATTGGTAGCTCATCGTCACG TGTGCGGTGTCAAGGAAATTAATGCTGACAATGCAAAATTATTGATGGAT GATTCGTTCTCCTTGACCACCAAGAACACTGATAAACGAATCAGCTTCAA CGAGCATGCGCCAATCTCGTGTTGGGAGGAACGCGAAAACGAGATGTGTA TTGCACCTGTTCTCGTGTGCACCAAGGTGAAACAAACAGCCGGCGGTGGT GATAACATAACACCAGCAGGTTTGATGCCACAGTTGTAAgataacttctt ttttttttggtctaaAGAACATTGGACATTAAATGGTAGAAACTTTAATA AAACCGATTAGAATTTTATTATCTTAAGTAAATAACTTTAAGTTAGCTAT CTGACAAGCGGAGATTCTAATAAGAGAACCAGAGGAACCAGAGGTGCCAG ATATTTATACACAAGAGAAAAgtaattttttgtaatttactaAATCTGTG tgaaacttattttggcgagtgacgAATCTTTTGtcgaatttttagttttg acaAAAACTGGGTAACGgcaaatttgtaaatttgtttttttttttgctta aaaatgagCCTTTTAGACAAAAATTAGGAaacataaaaatttcaattttg gcgaggaCTTTTTTCGGCGAGTATTCAATCTCTCTTCTCTTTTTCTTGGA AAGTTAGGCCCATCAAAAGTCCATTCTGGAATTAGGGGTCAGACAGTCAT TTTGATTCTGTCAACTACAATAATCTCTATTGAATGAAGAttttgggagt ttctaaacatcgaccagaaatggcgaccacgaccagcgaccacaaccggc gaccagataaatttgggttatcgagtttacctgctctctccaccgtagag aacatccaaatcgag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014620TCONS_00014620Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014620-proteinTCONS_00014620-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:359208..366422 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.62 6.11 4.75 4.39 14.84 10.98 18.09 18.84 18.33 14.94 16.31 14.31 10.7 10.07 14.14 15.1 19.51 15.58 8.19 10.11 15.52 14.69 21.61 21.85 15.36 15.07 4.57 2.5 16.43 14.93