TCONS_00014620 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014620
Unique NameTCONS_00014620
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014620 ID=TCONS_00014620|Name=TCONS_00014620|organism=Clytia hemisphaerica|type=transcript|length=2147bp
GGAATTCTTGTTTTGGCGCTCCATAAAGGGGCGCCGATTGCcactatttt
tattttacgtcTTCACTTCAAGATGGCGACAACTTTGCAAGGCAATTCTC
AAACTATGTCGACGTTCACAGTTTTAAGACACCTTTTTCTTGCCATATCC
TTTGGTATTTTTGGATATTACTATTACAACAACTATCTCAATATCGAAAG
ACAACGTGTGAATAATGTTTTACATGGACTCTTACTTGAAGAACGTAGTG
TGAATCTCTCAACTGAAAAGGCCGTTGCTGTTGGTTTTGGAGCTTGTGTT
GATCTTTTTGTTGATGGAATCCCTCTTGTCAATGCTCTTGGATTAAAGCC
GCCTAAAGAAGCAAAATATCACAATAATATTCAATCATTGGAAGATGTTG
CAGAAATGTTTGCTTTCTTCTTATCCAATGGTGCAGCTGCAGAgcGATAC
GTTTCAAACGAGTTGCTGTCGGTCATGGTGGAAAAGGCCGCCCAATTGGA
AGGGGCTTATTTGGCGATGGGTGGAAATGCGCCCGTCATCAGCAAACGAT
TTGCAATCGAAGGATTTACCGTTTACGTTGGTGCCAAAGGATCAGAGAAA
ATGCGCAAACAAGTTCATAAAAACATTCACTTTTCACAGGGGTTTGGGGA
GAATGATGATATTCATTTGATTTTGGAGTATAAAGTTGGAGAACAATGGG
GTCCGTATGTTGTAAATCGGGCGAATCGGTTCATTTTACATTCCGATAAA
AACAATCCGGAATTAAGATCTTTGGAAAGTTTTATGGAAGTTGTGGAAAA
AGTTCAACCGCAAACTGTTTTGATTGGTGGCTTACAAATGCTTGATAATT
TTAAATTCGAAGAAGGCGTCCGCGAGGAGAGAATGAATAAGATGAGAGAT
TGGTTGCGTGGTTTACCAGCTACCATCAAAATCCATTTCGAAATGGCTTC
ATTTGGAGAAGTGGCTATGATGAAGTCACTGATTGAAAATATTGTTCCTT
ATGTTGATTCTTTGGGAATGAATGAACAAGAACTTCCAAACATTGAAAGT
ATGATTCGAGATGGAACCATCATTGAAGTCGCTGATTCCAATCCACGAAC
GGCCACGGTTCTCGATAACCTACGCTCGCTTATTCAAAATGTTGAACTCG
TTAGTCAGCGCGGTTTATCGCGCGTTCATGTTCACACGTTAGCGTATCAA
GCCATCTGGACGAAGAAAGGTTCTATGTGGAAGAACACACGTGCTGGGTG
CGCTAAAGCCTCATTGGTAGCTCATCGTCACGTGTGCGGTGTCAAGGAAA
TTAATGCTGACAATGCAAAATTATTGATGGATGATTCGTTCTCCTTGACC
ACCAAGAACACTGATAAACGAATCAGCTTCAACGAGCATGCGCCAATCTC
GTGTTGGGAGGAACGCGAAAACGAGATGTGTATTGCACCTGTTCTCGTGT
GCACCAAGGTGAAACAAACAGCCGGCGGTGGTGATAACATAACACCAGCA
GGTTTGATGCCACAGTTGTAAgataacttcttttttttttggtctaaAGA
ACATTGGACATTAAATGGTAGAAACTTTAATAAAACCGATTAGAATTTTA
TTATCTTAAGTAAATAACTTTAAGTTAGCTATCTGACAAGCGGAGATTCT
AATAAGAGAACCAGAGGAACCAGAGGTGCCAGATATTTATACACAAGAGA
AAAgtaattttttgtaatttactaAATCTGTGtgaaacttattttggcga
gtgacgAATCTTTTGtcgaatttttagttttgacaAAAACTGGGTAACGg
caaatttgtaaatttgtttttttttttgcttaaaaatgagCCTTTTAGAC
AAAAATTAGGAaacataaaaatttcaattttggcgaggaCTTTTTTCGGC
GAGTATTCAATCTCTCTTCTCTTTTTCTTGGAAAGTTAGGCCCATCAAAA
GTCCATTCTGGAATTAGGGGTCAGACAGTCATTTTGATTCTGTCAACTAC
AATAATCTCTATTGAATGAAGAttttgggagtttctaaacatcgaccaga
aatggcgaccacgaccagcgaccacaaccggcgaccagataaatttgggt
tatcgagtttacctgctctctccaccgtagagaacatccaaatcgag
Run BLAST on NCBI

protein sequence of TCONS_00014620-protein

>TCONS_00014620-protein ID=TCONS_00014620-protein|Name=TCONS_00014620-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
GILVLALHKGAPIATIFILRLHFKMATTLQGNSQTMSTFTVLRHLFLAIS
FGIFGYYYYNNYLNIERQRVNNVLHGLLLEERSVNLSTEKAVAVGFGACV
DLFVDGIPLVNALGLKPPKEAKYHNNIQSLEDVAEMFAFFLSNGAAAERY
VSNELLSVMVEKAAQLEGAYLAMGGNAPVISKRFAIEGFTVYVGAKGSEK
MRKQVHKNIHFSQGFGENDDIHLILEYKVGEQWGPYVVNRANRFILHSDK
NNPELRSLESFMEVVEKVQPQTVLIGGLQMLDNFKFEEGVREERMNKMRD
WLRGLPATIKIHFEMASFGEVAMMKSLIENIVPYVDSLGMNEQELPNIES
MIRDGTIIEVADSNPRTATVLDNLRSLIQNVELVSQRGLSRVHVHTLAYQ
AIWTKKGSMWKNTRAGCAKASLVAHRHVCGVKEINADNAKLLMDDSFSLT
TKNTDKRISFNEHAPISCWEERENEMCIAPVLVCTKVKQTAGGGDNITPA
GLMPQL
Run BLAST on NCBI

transcript from alignment at sc0000191:359208..366422+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014620 ID=TCONS_00014620|Name=TCONS_00014620|organism=Clytia hemisphaerica|type=transcript|length=7215bp|location=Sequence derived from alignment at sc0000191:359208..366422+ (Clytia hemisphaerica)
GGAATTCTTGTTTTGGCGCTCCATAAAGGGGCGCCGATTGCcactatttt tattttacgtcTTCACTTCAAGATGGCGACAACTTTGCAAGGCAATTCTC AAACTATGTCGACGTTCACAGTTTTAAGACACCTTTTTCTTGCCATATCC TTTGGTATTTTTGGATATTACTATTACAACAACTATCTCAATATCGAAAG ACAACGTGTGAATAATGTTTTACATGGACTCTTACTTGAAGAACGTAGTG TGAATCTCTCAACTGAAAAGGCCGTTGCTGTTGGTTTTGGAGCTTGTGTT GATCTTTTTGTTGATGGAATCCCTCTTGTCAATGCTCTTGGATTAAAGCC GCCTAAAGAAGCAAAATATCACAATAATATTCAATCATTGGAAGATGTTG CAGAAATGTTTGCTTTCTTCTTATCCAATGGTGCAGCTGCAGAGTAAGTA CTTTTTTTAATCCTTGGTTctttttattcatgatattcatgattgGGCTC TTCTAGTTAAAGTCCGTTACAGGGGGGTAGATGACGGCGGAATTCCgagg caaaatttttttttgaaatttttggatttccaatacaaaagcaattgaaa ctcctggatttccaatacgaaatctggaatttccgatacttttttcaaaa ttttgacgaaTTACCGTCaattgctctaacttgggactatctgacaaaac atgagacggcaatagaccttttttcaaagaggccaccctgctgaataatt atgtagtccagcagaaaaacaatgataaaaccatgcataataattacaat atgcatgatacagtaattatgcatggctctatcattgttttcatGGCTGG ACttcataattattcaacagggcgtcctctttgaaaaaaggtctattcgg ccaccatttcaccgaacctccaaagtcatttgatttgagttaagcaacag cgtatttaaaaatacacgatctctcttttgattttaggggccactcacat atcgatttttcCTACGCTTATAGCGTCATGTCGACGCTATAGGGTGGGTG GGTGGTTTAGATCGAGTGACGCTAAGAAAATCTACTAGAGATATCGGTTT TTGAGGCCAAAGAGAtgttcaaatttccagaaaactaTAACTTCCATact tattattttcaattagcACCCTGTTCCCCTGTTCATATTCAAGATTCAAC AAAACATCCTCGCGCTTCTCTTTTTTACCGCATCAAAAATAAGCCAGTAT ATAGTAAAATACCGGAGATGCTATGTTTAAAAGTTTGGGACTTTCCCCGC GTCATAACTTATGCGGGTCTGAGAACCAGACTGTGCAAAAGTCATATACC GAAACCACTACtcgaaaaaaaagcaaaatgtaCCAAGCAGAAGAGGGAAG AAACTTCTCTGGCAGTGGAACATCAATACTTGAAGTGAGAAAGGAAAAAA GGTTTTCATTGGTTTTCGGTATATTTTATAATATGACACTAAGGGTAGGG GGTGAGTGGGTTTTTTGATTAGCGTCGGAATGACGCTAAGCGTGGgaaaa atcgatatgtgagtggcctcttacagtaagtgaaaatacagaccagatat gcaacagtcccatgtttcgaccaatcgtcccaagttagagcagttgacgg tatgtggaatttccaatggttcaaataaaaaaattgagcggAATTTTTga agcactttgaaaaattgactggatttccaagtgttttttttatctgaaaa ttcctGTCGTCCAACCCctatatcaaattttttctggaaaagcccattaa aaatctttagatatgaaacaatagagagaagATAAATCATGTAAACATTT GGCCGACATTTTTTTGTGGCTAAAAATCAGATGAGCTAAGCTATTTTGTA CCGtcgtgaagtcaggtaacttgcatcagtggaggtaaacttgcatagcc atcaaatgactgactaatcaaagcagcaaaatttcaaaacaaaagaatta cgcagctccgctcgcagctccgctcgcagctctactctaccatttttgtt ttgatttaactttgtcattcatttgagggctatgcatgttagcctccact gatgcaaattACCCAATCTAACGGTATAGACCAGACGGtcgtaattgata aaatcgatcatcgattaaaatcgatagctaatcgatattaatcgatGAAC TATATCGATTAAAATCCATAATCGTTAGCTAATCGATATTCACAATTTTT TCGTCCTCGATTAGCTATCCATTGCTATCAATCCAATCGATATTATCGAT TATCAATTTATGGAGTTAGTGAATactgtatttaaaaaagaagtATAATA AAAGAGGTTCTGGTTCATTTAGTTTTgaatagcctggatatccaggctgt aaactatttcacagtctagtttttgatatttttatgttctggtttacagc ctggtctccctagagcgatttgcattctctttaagagaatgcagtccgct tgcttgtgctcacttcgctaaagccgtaagggccaatctacacagcGCGG AGCAAttataaagcaaaaataggatagtcctccagttgctaagtgaagat agggctttctgttacatgaaaacatgaaaaagaagaaaacagaggcaagt tcattttccaagaaaacatggttggtcatgataatgcatgcaaacttttt tatggactttggtgtaatctttggatattttaaatagttttagatcttgt aagactgctttttattaatttctgttttgctgccctgggttgactaggaa acatgggtttgcactttctttcTCTAGGGAGACCAAGCTCTATAATTTTA GAACTTTGTATGTTGAGGTAActtttgttttttctaaaattttgagcttg gatatccaggctaagttTTGAAGTGTTGCTAATTAAATCAAACCAATTGA ATCTGTTTATTCAATCCATAATTCGAACCTCGAAAAAGAATCTATTCCTA AATACCTTAGAGTAAAGCTAAATAAAAAGCTCAAATGGAACACACATACT GATGCTATCTGTAAGAAAGCTAACAAAATACTTACAAAGAAATATACGTT TTATAAGGGTATACTCTCCCATAGGTAGGTTTCAAAACCCGCAGAAATTA ACGTCAAAAGTTGCTACAGGTTTTTTGTCTTTCGACATCTTCAAAGCCTT GAATTGTAATTGTTTATGATAAAAAGATTGTTGTTTATACCAAGCTAGTA TCATACATACTGAAGACTTATACAGTTAATTAGTGGACAAAAAGTATTGC CAGAGCCTTATTTCGAGAACCAATGAAAACCCGGTGTTTTTTGGTAGAAA AGCTAGACTttccttttttgacgttttactgACGGTAGCTTCGTCTGCGA AGGGAAAAGATCAGAATTATCTTCAATGTGAATGCAAAAGTCTTCAAATG ATTTGAAGGTTTCCCGAGGTTAGAAGTACCATAAAAGTCATTTGGAGGAT AAACAAATAATTTTAGAGCAAATTTAAAGcttggttttgaaaaatttgca aagtAACCAAAAGTTGACAAATTTTAAAGTGGTTGTTTTTCTcaggaaaa aaatgtttaaatgtTTTTCTCGATAAAAACCTGGTTAGGACTCATCCTTC TTTGTTATTTGTGCCTAATTACCCTTTCCTCTTCCCCTGTAACGAAGAAC ATGGAAGAATTTTGGCTACCCGTGATTTAACTTTGAATTCAAAAACCata aattgacgtcaattttttatttttatgcgGGTCTGGCTTTAGGCATTATG TCACTCTTTTTATCATAAGACTTGACCAGGACCGCAAATGATTCTGAAAT TTAGCACAAAGAACCGGATTGGAATTTTaaagacacttttttaacaATGA TACGTCAAAATAATGACATTCAAAATcatgtaaagttttttttgggcCAC CCGGTAAAAGTTGACTCATTTGTTCTTCTTCATGGTATAAGAGAGGATAG CCTTGCAATGCCTGATTGAGAACTAATAAGTAAATGAAAATTTGGCAATG CGTGAAAAATGACTATGAAATTGAGTATGAAATGCATAAGCCTAAAGTGA TTCAATTAGAATTAGAAAACTAGTTATGTTCAATACAATAATCTTTTGTG TGTAGTCCCTGTGTGCTTTTTCGCCAGTCTGAGTTTCTTGTCCAATTTTT GAGTCACTTCAGATTTtttctagtgggtctttttggagtCAATATTCTTT GCAATTTCTAACTATACATCCAGTGACTTAGTACTTAGCAGATTCCTTTT TGACAAAGATTTCGGATAAAGATTTTTAttgtatatatttgaataaacat aaacatttaCACTACTTTTTTAGCCTTTATTTATATTTAGTGATAATGAA CATTCATGTTTAATGactacttaaatatatagatagattaCCCCTTCTGT ATTGACgatatttaaaatatttcctgGGGGTCGTTGCTTGGAAAATACTG TGCACACAAGTTTTCTTGCCACTGAAAATGGCTGCCAAATGTTTTGAATC GATGTGTCAATAAACGAATACAtaacgtcatgaatatcataaatAGACCT TCTGCTAGTTtagatgtcatgttgaataaaatcaaaaactccagcCTCAA AACAATAGCACATTAATACATAATTAATATAAGTAGatgcattaactttt tcttgtcattgttggtgctggagtttttaattattcataTGACATCCTAA tttagcaaaaggtctatttcatTGTCCCCTcactttttttgaatgaaaag ttTTCATACCATAAGATGGCTGGCTAAACTTTTTCATTCTCAGGGAAGCA TTGTTATCGCCACTTTACTTTTACAATAGGTTAACATAAAAATCATCACA CTGGGTAGGTACAAAAGTAGCTTCAACTTGATAGCCCGTTGTTTGTTGTC TAACTCATTTTATGCAGCGAAAAATCATCTTTGCTGGTATGTCCAGAAAA AAAGCAACAAAGGATCCCGGAAACGTGCCAGGAATGTTTTCCATGGAAGG AGAATGTTTAGCCTGTGGGTATTTTTAAAAGCCTCTTTTCTAGGCAAACT CAATCATAGATTACTTTCTCAAATATTTAACAGAAAGTTGCTTTGATTTC TATATGGGACAATTATCTGATCAGttgaaaaaatgattgacaactTCAAA CCTTCAAACTTAGTCAGAAAAAAAGACTAAAAGACTCATTTTGTGGATCC TATTCCAATTCAATTTTTCCTATTGTCCATTCTTTTTTCAATTgatatta aaaaattgaaactgaAAATTACATGATTTTGATTATGAAGTACATTTAAG AAAATACTccatattgtttttttttttgcatgtgtTTTTCACATGTTAAG GCTTAATTAATTAAGGCAGTTTTTTCCTATAGTGGTTAAAAATGGTGCTT TCCATGTGTTTTAGCTCAGAAACTGAACGAAACAACCAAgatacttttta tttattttcaggcGATACGTTTCAAACGAGTTGCTGTCGGTCATGGTGGA AAAGGCCGCCCAATTGGAAGGGGCTTATTTGGCGATGGGTGGAAATGCGC CCGTCATCAGCAAACGATTTGCAATCGAAGGATTTACCGTTTACGTTGGT GCCAAAGGATCAGAGAAAATGCGCAAACAAGTTCATAAAAACATTCACTT TTCACAGGGGTTTGGGGAGAATGATGATATTCATTTGATTTTGGAGTATA AAGTTGGAGAACAATGGGGTCCGTATGTTGTAAATCGGGCGAATCGGTTC ATTTTACATTCCGATAAAAACAATCCGGAATTAAGATCTTTGGAAAGTTT TATGGAAGTTGTGGAAAAAGTTCAACCGCAAACTGTTTTGATTGGTGGCT TACAAATGCTTGATAATTTTAAATTCGAAGAAGGCGTCCGCGAGGAGAGA ATGAATAAGATGAGAGATTGGTTGCGTGGTTTACCAGCTACCATCAAAAT CCATTTCGAAATGGCTTCATTTGGAGAAGTGGCTATGATGAAGTCACTGA TTGAAAATATTGTTCCTTATGTTGATTCTTTGGGAATGAATGAACAAGAA CTTCCAAACATTGAAAGTATGATTCGAGATGGAACCATCATTGAAGTCGC TGATTCCAATCCACGAACGGCCACGGTTCTCGATAACCTACGCTCGCTTA TTCAAAATGTTGAACTCGTTAGTCAGCGCGGTTTATCGCGCGTTCATGTT CACACGTTAGCGTATCAAGCCATCTGGACGAAGAAAGGTTCTATGTGGAA GAACACACGTGCTGGGTGCGCTAAAGCCTCATTGGTAGCTCATCGTCACG TGTGCGGTGTCAAGGAAATTAATGCTGACAATGCAAAATTATTGATGGAT GATTCGTTCTCCTTGACCACCAAGAACACTGATAAACGAATCAGCTTCAA CGAGCATGCGCCAATCTCGTGTTGGGAGGAACGCGAAAACGAGATGTGTA TTGCACCTGTTCTCGTGTGCACCAAGGTGAAACAAACAGCCGGCGGTGGT GATAACATAACACCAGCAGGTTTGATGCCACAGTTGTAAgataacttctt ttttttttggtctaaAGAACATTGGACATTAAATGGTAGAAACTTTAATA AAACCGATTAGAATTTTATTATCTTAAGTAAATAACTTTAAGTTAGCTAT CTGACAAGCGGAGATTCTAATAAGAGAACCAGAGGAACCAGAGGTGCCAG ATATTTATACACAAGAGAAAAgtaattttttgtaatttactaAATCTGTG tgaaacttattttggcgagtgacgAATCTTTTGtcgaatttttagttttg acaAAAACTGGGTAACGgcaaatttgtaaatttgtttttttttttgctta aaaatgagCCTTTTAGACAAAAATTAGGAaacataaaaatttcaattttg gcgaggaCTTTTTTCGGCGAGTATTCAATCTCTCTTCTCTTTTTCTTGGA AAGTTAGGCCCATCAAAAGTCCATTCTGGAATTAGGGGTCAGACAGTCAT TTTGATTCTGTCAACTACAATAATCTCTATTGAATGAAGAttttgggagt ttctaaacatcgaccagaaatggcgaccacgaccagcgaccacaaccggc gaccagataaatttgggttatcgagtttacctgctctctccaccgtagag aacatccaaatcgag

Coding sequence (CDS) from alignment at sc0000191:359208..366422+

>TCONS_00014620 ID=TCONS_00014620|Name=TCONS_00014620|organism=Clytia hemisphaerica|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000191:359208..366422+ (Clytia hemisphaerica)
GGAATTCTTGTTTTGGCGCTCCATAAAGGGGCGCCGATTGCcactatttt
tattttacgtcTTCACTTCAAGATGGCGACAACTTTGCAAGGCAATTCTC
AAACTATGTCGACGTTCACAGTTTTAAGACACCTTTTTCTTGCCATATCC
TTTGGTATTTTTGGATATTACTATTACAACAACTATCTCAATATCGAAAG
ACAACGTGTGAATAATGTTTTACATGGACTCTTACTTGAAGAACGTAGTG
TGAATCTCTCAACTGAAAAGGCCGTTGCTGTTGGTTTTGGAGCTTGTGTT
GATCTTTTTGTTGATGGAATCCCTCTTGTCAATGCTCTTGGATTAAAGCC
GCCTAAAGAAGCAAAATATCACAATAATATTCAATCATTGGAAGATGTTG
CAGAAATGTTTGCTTTCTTCTTATCCAATGGTGCAGCTGCAGAgcGATAC
GTTTCAAACGAGTTGCTGTCGGTCATGGTGGAAAAGGCCGCCCAATTGGA
AGGGGCTTATTTGGCGATGGGTGGAAATGCGCCCGTCATCAGCAAACGAT
TTGCAATCGAAGGATTTACCGTTTACGTTGGTGCCAAAGGATCAGAGAAA
ATGCGCAAACAAGTTCATAAAAACATTCACTTTTCACAGGGGTTTGGGGA
GAATGATGATATTCATTTGATTTTGGAGTATAAAGTTGGAGAACAATGGG
GTCCGTATGTTGTAAATCGGGCGAATCGGTTCATTTTACATTCCGATAAA
AACAATCCGGAATTAAGATCTTTGGAAAGTTTTATGGAAGTTGTGGAAAA
AGTTCAACCGCAAACTGTTTTGATTGGTGGCTTACAAATGCTTGATAATT
TTAAATTCGAAGAAGGCGTCCGCGAGGAGAGAATGAATAAGATGAGAGAT
TGGTTGCGTGGTTTACCAGCTACCATCAAAATCCATTTCGAAATGGCTTC
ATTTGGAGAAGTGGCTATGATGAAGTCACTGATTGAAAATATTGTTCCTT
ATGTTGATTCTTTGGGAATGAATGAACAAGAACTTCCAAACATTGAAAGT
ATGATTCGAGATGGAACCATCATTGAAGTCGCTGATTCCAATCCACGAAC
GGCCACGGTTCTCGATAACCTACGCTCGCTTATTCAAAATGTTGAACTCG
TTAGTCAGCGCGGTTTATCGCGCGTTCATGTTCACACGTTAGCGTATCAA
GCCATCTGGACGAAGAAAGGTTCTATGTGGAAGAACACACGTGCTGGGTG
CGCTAAAGCCTCATTGGTAGCTCATCGTCACGTGTGCGGTGTCAAGGAAA
TTAATGCTGACAATGCAAAATTATTGATGGATGATTCGTTCTCCTTGACC
ACCAAGAACACTGATAAACGAATCAGCTTCAACGAGCATGCGCCAATCTC
GTGTTGGGAGGAACGCGAAAACGAGATGTGTATTGCACCTGTTCTCGTGT
GCACCAAGGTGAAACAAACAGCCGGCGGTGGTGATAACATAACACCAGCA
GGTTTGATGCCACAGTTGTAAGGAATTCTTGTTTTGGCGCTCCATAAAGG
GGCGCCGATTGCcactatttttattttacgtcTTCACTTCAAGATGGCGA
CAACTTTGCAAGGCAATTCTCAAACTATGTCGACGTTCACAGTTTTAAGA
CACCTTTTTCTTGCCATATCCTTTGGTATTTTTGGATATTACTATTACAA
CAACTATCTCAATATCGAAAGACAACGTGTGAATAATGTTTTACATGGAC
TCTTACTTGAAGAACGTAGTGTGAATCTCTCAACTGAAAAGGCCGTTGCT
GTTGGTTTTGGAGCTTGTGTTGATCTTTTTGTTGATGGAATCCCTCTTGT
CAATGCTCTTGGATTAAAGCCGCCTAAAGAAGCAAAATATCACAATAATA
TTCAATCATTGGAAGATGTTGCAGAAATGTTTGCTTTCTTCTTATCCAAT
GGTGCAGCTGCAGAgcGATACGTTTCAAACGAGTTGCTGTCGGTCATGGT
GGAAAAGGCCGCCCAATTGGAAGGGGCTTATTTGGCGATGGGTGGAAATG
CGCCCGTCATCAGCAAACGATTTGCAATCGAAGGATTTACCGTTTACGTT
GGTGCCAAAGGATCAGAGAAAATGCGCAAACAAGTTCATAAAAACATTCA
CTTTTCACAGGGGTTTGGGGAGAATGATGATATTCATTTGATTTTGGAGT
ATAAAGTTGGAGAACAATGGGGTCCGTATGTTGTAAATCGGGCGAATCGG
TTCATTTTACATTCCGATAAAAACAATCCGGAATTAAGATCTTTGGAAAG
TTTTATGGAAGTTGTGGAAAAAGTTCAACCGCAAACTGTTTTGATTGGTG
GCTTACAAATGCTTGATAATTTTAAATTCGAAGAAGGCGTCCGCGAGGAG
AGAATGAATAAGATGAGAGATTGGTTGCGTGGTTTACCAGCTACCATCAA
AATCCATTTCGAAATGGCTTCATTTGGAGAAGTGGCTATGATGAAGTCAC
TGATTGAAAATATTGTTCCTTATGTTGATTCTTTGGGAATGAATGAACAA
GAACTTCCAAACATTGAAAGTATGATTCGAGATGGAACCATCATTGAAGT
CGCTGATTCCAATCCACGAACGGCCACGGTTCTCGATAACCTACGCTCGC
TTATTCAAAATGTTGAACTCGTTAGTCAGCGCGGTTTATCGCGCGTTCAT
GTTCACACGTTAGCGTATCAAGCCATCTGGACGAAGAAAGGTTCTATGTG
GAAGAACACACGTGCTGGGTGCGCTAAAGCCTCATTGGTAGCTCATCGTC
ACGTGTGCGGTGTCAAGGAAATTAATGCTGACAATGCAAAATTATTGATG
GATGATTCGTTCTCCTTGACCACCAAGAACACTGATAAACGAATCAGCTT
CAACGAGCATGCGCCAATCTCGTGTTGGGAGGAACGCGAAAACGAGATGT
GTATTGCACCTGTTCTCGTGTGCACCAAGGTGAAACAAACAGCCGGCGGT
GGTGATAACATAACACCAGCAGGTTTGATGCCACAGTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008183XLOC_008183Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014620-proteinTCONS_00014620-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014620-exon-sc0000191-1491911889:359208..359650TCONS_00014620-exon-sc0000191-1491911889:359208..359650Clytia hemisphaericaexon
TCONS_00014620-exon-sc0000191-1510915933:359208..359650TCONS_00014620-exon-sc0000191-1510915933:359208..359650Clytia hemisphaericaexon
TCONS_00014620-exon-sc0000191-1575043694:359208..359650TCONS_00014620-exon-sc0000191-1575043694:359208..359650Clytia hemisphaericaexon
TCONS_00014620-exon-sc0000191-1491911889:364719..366422TCONS_00014620-exon-sc0000191-1491911889:364719..366422Clytia hemisphaericaexon
TCONS_00014620-exon-sc0000191-1510915933:364719..366422TCONS_00014620-exon-sc0000191-1510915933:364719..366422Clytia hemisphaericaexon
TCONS_00014620-exon-sc0000191-1575043694:364719..366422TCONS_00014620-exon-sc0000191-1575043694:364719..366422Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:359208..366422 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.6196 6.10783 4.74783 4.38952 14.8442 10.9797 18.0898 18.8368 18.3271 14.9368 16.3089 14.3099 10.7011 10.067 14.1361 15.1006 19.5106 15.5809 8.19174 10.1079 15.521 14.6911 21.6067 21.8509 15.3624 15.0657 4.57495 2.50267 16.4285 14.9285
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029056Ribokinase-like
IPR007666ADP_PFK/GK
Vocabulary: Molecular Function
TermDefinition
GO:0016773phosphotransferase activity, alcohol group as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
Blast
BLAST of TCONS_00014620 vs. Swiss-Prot (Human)
Match: ADPGK (ADP-dependent glucokinase OS=Homo sapiens GN=ADPGK PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.284e-51
Identity = 130/413 (31.48%), Postives = 201/413 (48.67%), Query Frame = 1
Query:  292 ACVDLFVDGIPLVNALGLKPPKEAKYHNNIQSLEDVAEMFAFFLSNGAAAERYVSN-ELLSVMVEKAAQLEGAYLAMGGNAPVISKRFAIEG-FTVYVGAKGSEKMRKQVHKNIHFS-QGFGENDDIHLILEYKVGEQWGPYVVNRANRFILHSDKNNPELRSLESFMEVVEKVQPQTVLIGGLQMLDNFKFEEGVREERMNKMRDWLRGLPATIKIHFEMASFGEVAMMKSLI-ENIVPYVDSLGMNEQELPNI-ESMIRDGTIIEVADSNPRTATVLDNLRSLIQNVELVSQRG--LSRVHVHTLAYQAIWTKKGSMWKNTRAGCAKASLVAHRHVCGVKEINADNAKLLMDDSFSLTTKNTDKRISFNEHAPISCWEERENEMCIAPVLVCTKVKQTAGGGDNITPAGLM 1509
            ACVD+ + G+ L+ ALGL P    K H+ + S  D+ E F  F+  GAAAER+ S+ E    + + A++  GA   +GGNA +I ++FA      V +      K+ + +  N+    +   E D+ HLILEY+ GE+WG      ANRFI   D +N  +  LE F+  +E+ QP  V++ GL M++    E  ++ +R+ ++   +  +P  I +H E+AS     +M S++ + + P V SLG+NEQEL  + +S     + +   +  P    V D L  +++       R   L+R+H HTL Y  + T  G  W N  A  A  + VA    C  + I+     L     F  +      RI  N + P+  W          PVLVC    +T G GD I+  GL 
Sbjct:   81 ACVDVVLSGVKLLQALGLSP-GNGKDHSILHSRNDLEEAFIHFMGKGAAAERFFSDKETFHDIAQVASEFPGAQHYVGGNAALIGQKFAANSDLKVLLCGPVGPKLHELLDDNVFVPPESLQEVDEFHLILEYQAGEEWGQLKAPHANRFIFSHDLSNGAMNMLEVFVSSLEEFQPDLVVLSGLHMMEGQSKE--LQRKRLLEVVTSISDIPTGIPVHLELASMTNRELMSSIVHQQVFPAVTSLGLNEQELLFLTQSASGPHSSLSSWNGVPDVGMVSDILFWILKEHGRSKSRASDLTRIHFHTLVYHILATVDGH-WANQLAAVAAGARVAGTQACATETIDTSRVSLRAPQEFMTSHSEAGSRIVLNPNKPVVEWHREGISFHFTPVLVCKDPIRTVGLGDAISAEGLF 489          
The following BLAST results are available for this feature:
BLAST of TCONS_00014620 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADPGK1.284e-5131.48ADP-dependent glucokinase OS=Homo sapiens GN=ADPGK... [more]
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