XLOC_008191 (gene) - C. hemisphaerica

Overview
NameXLOC_008191
Unique NameXLOC_008191
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000191:446162..450848-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008191 ID=XLOC_008191|Name=XLOC_008191|organism=Clytia hemisphaerica|type=gene|length=4687bp|location=Sequence derived from alignment at sc0000191:446162..450848- (Clytia hemisphaerica)
NTCGTGATCATGGACTCGTACTAATAATTAGAGTTAGATAAATTATTTCA TTTTGCCAAAATAATTAATTCGTACTAATTAGAGGACGGATTAAATTAGA AGAATGACTGAATATTTCAATGAGTCTTTTCTTAGATAACAAAATGAGGC GTGTAAGAAGATCTTTGGCAACCCTAGCAAAGATCAAGAGAAAAGATTTT AGAACAGCAACGACCACACCTCCACTATTGAATAAACCATCGGAATACAA AACCCGACGTCTGATCTCAACTTCGCATCGTGGCTTATACGCACCATCGG TTATCGAAAACAACGAGAATCTTTCCCTCAAAGTTTCTTGGGACAATGGA GAAGAATCAGAATTTGCAAATATTTTCCTCAGAGATCAATGTCAATGCCC ATCATGTTTTAAAGTCGAATCATACAATCGATTATTGGAGCCATATACTA TACCTTTGGACGTCAAACCCAAAAACATTGAAATCACTCAAAACTCTATC AATATTTCCTGGACAGATGAACATTTTAGTTCCTACCCGTTTGAGTATTT ACAAAACATTCAGAAAGGATTAGATGATGATGTTCGATACTTAGAACCGA TAATGTGGAAATCGGGTTATTTCAAGAAAAACGGATTTCCAACGTATGAT TTGTCGGATTTGATTGAAAACGAAAGTGCCATGTTAGATTGGTTTCTAGA TTTGAAACGCTTGGGTGTAACTTTATTAAAAGGGCGTGAAGAAAAGAAAG GGGCGTTAGAATTGATTAAAGAGAAATTGTTTGGTGGCTACTTCAAGTCT ACTCATTATGGGTGAGTTGGTTTTCTGTGTGAATATTTCAGCTAGACAGG TTCATTTTGAACTGAAATTTCTCCGTGCCTACCGATGGGTGATATAGCAT TTCTGTTGCTAAGCGAAGTCCACATTCGAGATACCGCTACTAGCACCAAA TTTTATCTTTCTCAGAAATTTAACCTGTGGCGGAGGACTATAACAACTTG ACTGTTCATATCTACAACTGATTGATGTCTACATTGAAGAAGTAGCCCAA GTTTTCGGGCTCTAAACATTCGATTTTTTGACGTCACTTTGAAGTTTCGA AGCTCCTGCTGTAGCGAAAATATCGAATTTGCGTCAATGCACTTGAAAGG CTTCTGTTTTGCGAAAATCATCAAAGCGTAGCTCACTAAGAAACGGGATC AAAAATCCCGGTGTTTGGTGAGGTGCTCACTAATCATGAGTGATGCAAAT TTGTTTGAAGGCAGATTTTTTAACTCAAAGGACATTAAAAAATTGTTAGA GCTATAAAGGTACAAGTTATACGGACTCCACTACACACGTATACCCTCAA TCAACATTAAAACCAATAGGCTAACAGACTTTCATTACCTCTAGACACAC ATTCGAAGTGATATCCAAACAAAACGCTGGAAATTTGGCTTACACATCAC AAGGGTTATGGCCACACGTTGATCTACCCCATATCCAAGAAATGCCTGGA GTAAGTTTTATCAAATATATTTTATTTTTTGTAATTACCTTTGCATGGTA TTAAGGGTCACCTTTTCAGCAAAAATCAGTCTCTCTAAAGGTCGGTTTTC GGAGGTCCCGTCCCCTCATTCGCCAACCCTAGTGCCCCCCCCCCGGGCTC AGATCTCAAAGTGCCTTATCATACTCAACAATTTACCTTTAACTTTTCTG CAAGACACTGAGGGCTTCTGCTAAGCCTAAAACACGAAAAAGTGGAAATG TTTTCAAGACAAGCTACCAGACAATTAATTCATCAAACTCGAACCAGTCC CTTAGTCCACTTTTTATGTTTCTGATAGCGCTCACGAAAGTGTCACGTGA TCACATGGTGGTACAAATGGCAAATACTCCATTGATAATTCATTGCCTTT TTTAACAATATTTAGATTCAAGCTTTACATTGTATCGTACAAACACAATC GCATGGCGGAGAGTCCACGCTAGTAGATGGATTCCAGGCTGCACAACAAC TCAAAGACATGGATCCACACTTATTCGATTTTCTTACTAAATACAAAGTT CGGTACCGTGATATTGGCTCAGATTATTTCGGACAATTTGAAACGTTCTG TGAAAGACCTATCATTGAGTAAGACTTCTACATCGCCTCTGCGCTGCATC ATTCTATGTCGCCGTGTCAATTCAAAACAGACTTAAGTCCATTTTTTCGA AAATTGACTTAAGACCATAACCCCCTATTTTAGCATGCACGCTTTCCAAA AACGGCCTTAAGTCCACAGAATTCTAATGGGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGTAGCCTTAAG TCCAACACATCTCAACCTTTAAAGTCAATTATCTCAAAATGGAAAAAATG GACTTAAGGCTGTCTTGAATTGACACGGCGATGTAGACATCCTTGTGATA TACAAAGCCTACGATCCTGTATATGATTTTATTTGTGTGTCAAATCGTAC ACCTCTGTGTCATTTTTGGCTATGCCAAACTCAATACTAAAACCCCACGT AGCATTTCATTAGACCCAATTCTAAAACCCCGTGTATTATTCTGTCTCAA TATTCACTATAGTACTTGCAGTCTTGAAAAATGGTCTACATCTTTCGAAA GAGTTGGCAGTAGAGAGAGAAACGTGTGAAAGAATAAAACCTTTTCTCCT TTCAGTTTTTCAGGAGACCGCTACCATGGTATTTACCACATCAACTTTCA AAGAGATTACGCCAACAGAGGCTCTGTGGAAGAAGTCAAAACATTCTACA AAGCGTTACGACAGTTCACTGGCCTACTCATACATCCTGAAAACATTTTC CAATTCAAGTTGAAACCAGGTTAGACGTGTAGTCAAGAAAGTAATGTATT TGCGAATGAATTTTAAACTTCAGAAATCTTTTTGTACCGGGCCTTCTTCA AGAAAATATTTTTCTGAACGTTAATTGCTAATATTATTCAACCGAAAATT CCCATTCTTTGATACTATTTTTTGTCTATGAAAATATTACGGGATTGCGA TTTGATTTTAAAAGAAATCCCGCTTTGACCACCGCAATGGTGGAATATTA ACAAAAAAACACACACAATCCAACTCAGCTTTGCTAATGGCTCATATCTC TTGTTTAGGCTGCTTGCACATCCACTAACGGATTCATGCTCCTTGTATAT ACTACCTGCGGCTCTGTAGCTGTCTACGATGCAGACTAGGTCATAAACAT ATAAACTTTAGTAGGAGTATCCTTCGAGTCTTTTAAAGGAGCTTGAGTCA CAAGTTTGAGTTATACATACAGTATGCAAGATGATGTCTCAGTGCGACTT CATTCCCGTCTTTTCCAGGCTTTATTTATGTTACTGATGGACGCCAGTGA ATTTATCTGGCGCTATCAGCAAGCTTAAAAAAGTCGATAATACGCGAGGA GCGTGGTAGGTCTGTAATTTTACCGCCGAGAACGTAAATCCTTATTGTAT ACAGTTGAACTCATGTAATTCGAACTCCTATAATTCGAAAACTTGCTTAA TTCAAACCTTACAAGAAAACTCCTATAATTCGAACCCATGTAATTCGAAA AATCATGTAAATCGAACAGATTTTCTAATCCCATCAAGAAATTTTAATCA TGTAATTCGAGTTTTCGAACTTTTCGAGTTTTTGAAGCTGACAAACTCGA CATTTTGTCGATCCGCCCCCATCGCAAAATGAGATTGACGACGCGATCAA GACTCTCAAAAAGATGACCCTTTTCGAATCATCGAACGTCATCCCACTGA TTCAGAAGATCTCCGAAGAGATTTAAAAGAAACAGAAAATGAAACAATCA ACAAAGACTTTTTTGAAAAATTATGAATATAGTATTTCATTATTCTAGCT CGAAAATACAAAAAAAAATGTTCAAAAGTAAACCTGGGAAAGACTTTTTT CGTCGAATTAGGTCAAAAATACAAAAAGTCCTCATCTAGTTCGAAACTCA TGTAATTCGAACAAAATTCTCGGTCCCTTGAGAATTCGAATTACATGAGT TCAACTATATTACTTAACAGGTGACGTCATAGTTTTCGACAATCAGCGAG TTTTACATGGACGAACAGCTTTCGATGCATCACCTGTCACACTCATTGAA AATGAAGTCGAAGAACAAAATGAGGAGAAAATCACCAGACATTTACAAGG CTGTTATTTTGACTGGGATCAAATATTCTGGAGAATAAGACCTGTTAAAA GACGAGTTGAAGCTGAAAGGAGGAAACCTGTTCAATAGCGACCATGAAAT GTGTCAAGTGTACATTGGAAAATTTCTGAATTCACAGCTTTAAAAAATTT AAAACGTTAAGGAAAAACAATGGGGAAAACTTGATTAGATTATAAAACCT AACCTGGGTTTCTTTTTTCAAAAACTTTTGAAATATCTATCACTCAAAAT TAAATCGTGGTTATCCCCCGGGGAAGGGGAGGGGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014641TCONS_00014641Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014641-proteinTCONS_00014641-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:446162..450848 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BBOX1PREDICTED: gamma-butyrobetaine dioxygenase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.14 0.03 0.27 0.22 1.64 1.47 0.9 0.96 7.48 1.49 1.55 1.58 1.11 1.61 0.8 1.24 0.17 1.36 0.44 0.52 0.34 0.21 1.03 1.26 0.77 0.36 10.76 7.55