XLOC_008411 (gene) - C. hemisphaerica

Overview
NameXLOC_008411
Unique NameXLOC_008411
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:80377..88271+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008411 ID=XLOC_008411|Name=XLOC_008411|organism=Clytia hemisphaerica|type=gene|length=7895bp|location=Sequence derived from alignment at sc0000203:80377..88271+ (Clytia hemisphaerica)
aatcaaaaacacAAGCACACTGGTACGGTGTTACGTTTGGTTCTGCACGT GGTTTATCATTCTTCGCCAACTCCGCCGCCTTTGCATTGGGCGGTTATTT GGTTCAAAATGATGAATTGGGATTTCAAGATGTTTTCAAGTAAGTATTCA TATTCAGGTCAAAATCTTAAGCAAGACTTTATGAATTGGGTTATTCTGGA AATTTCTACCCCCTTTGTTGAggtctttttttggaaaattgactccctaa atttttttttcaatttttttgaaaaacgtgGATTTTTGACCCTGTTTTaa tgaccaccctggattttcaaccttaTTTTACCGAAAACCCTGGATTATTA CACTCCAAAAACTAGACCCCCAGATTTTGTTTATTTCCAAACCACCCTGG ACGAACACACCTTTTCAACATGGGGGGTAAAGAATATTTCTGAAATAGCC CCCTTCTAACAGCTTCTGATCAATCAAATTTACTTCGCTTCCCGATTGGC TTCGGTTGGATTCAATAGCTAGCTAGATTTGGATTTGATTGATATTGATG GTTTACCAATTGAAATATCTAGGAGTTTGTTCGCAAGTTAATCGCAGATT AAAtaaatcgaatacaatcaaattaaattttatcaGACTTAGGGGCTGTT CATAGGGAGGCGGACTGGCCCGTATAGGTCCAGTCCCTTAGATGAAGGTT TCATTGGATGAACTCGTTCAATTCCATCCAGTCAGTTTATTGGCTGTGAT TACTTCGACTGAATTAATTGTAAATCATAATTCGTATGGATTATTTTGTT CGTTTCCATTGGAGCCCGGTATGAACACTAACACGTAACATTAAATGTGG ACATTAACATAACCtgtcaaattaaaaaagatcGAAAAGTCTAACCTTAT GTTTATTGTTGATTGTAGAATCATTATCGCAGCCACATTTGGATCCATGA TCGCTGGTCAAGCGTTATCCTTTACACCAGATTACCTTTCAGCAAAAGTG GCTGCTGGTCGTTTGTTCAAGCTCTTCGATACTGAATCCAAAATCGATGT CAATCAACCTGGTGGAAAAATCAaggttcaaaaattttacacgctttttc tataagaatggtgtttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTAaagaaa acacccccttctcacagacccggttggATTCTTTtaaccagtggggataa aaatattggaCTGAccctcgatggggattgatataaGGTAAAGGGTAAAG CCAATGAagaataaattctaaaaaatagaaaatgtcTTAAAAAGATCTTC AAaatcaactttgttttgatgacagGTATCACAACAAGCTTTGATGAATA TTCGGACAGTCGCATCACTGGGCAAAGAAGATTACTTTTATGAACGATTT TCATGCCTTTTACAAGAGCCTTATCCGTAAGTATTTGAAGGGATGATTGA GATTTTTGGTAACAAAGATTACCTTGGTTGGTTATATAACCATATTAATA CAATGATATCATTGGAGTCTCCGGAGAAATCACTATTCTTTCctatataa attatttttccatATCAGTACATATCGACTGGCTCTCATGGTGAAATCTT TCTGCTTTCTTTTCTaaagggggggtttcagggggtacccgattccgcaa ttccgtaaattttttcttcaatttccgtcaaaccgtcttaaattgaacca aaattccgtcaccgaaaattcctttgaaattcaatatttttgtcgaaaaN TTCGCAAGTTAATCGCAGATTAAAtaaatcgaatacaatcaaattaaatt ttatcaGACTTAGGGGCTGTTCATAGGGAGGCGGACTGGCCCGTATAGGT CCAGTCCCTTAGATGAAGGTTTCATTGGATGAACTCGTTCAATTCCATCC AGTCAGTTTATTGGCTGTGATTACTTCGACTGAATTAATTGTAAATCATA ATTCGTATGGATTATTTTGTTCGTTTCCATTGGAGCCCGGTATGAACACT AACACGTAACATTAAATGTGGACATTAACATAACCtgtcaaattaaaaaa gatcGAAAAGTCTAACCTTATGTTTATTGTTGATTGTAGAATCATTATTG CAGCCACATTTGGATCCATGATCGCTGGTCAAGCTTTATCCTTTACACCA GATTACCTTTCAGCAAAAGTGGCTGCTGGTCGTTTGTTCAAGCTCTTCGA TACTGAATCCAAAATCGATGTCAATCAACCTGGTGGAAAAATCAaggttc aaaaattttacacgcttcttctataagaatggtgttttccCATTTCATTT TGGAGAAAACcttcctaaaatattcttatacggtattcttaggttaggaa cTAGGCTTatgctcatcctctagcaaaAACAGTTTCTTATAgaatatagg aagtatatctataaaGGTCTGCAGTTCAGACTAGTTAGGAACGAGATTCA ATGAAATTTAAcatgtaatcgtcagccgtgcaaaattactcgaatctgat tggtttagaggagtgcgattaatcgttaattgcactattaccactttttg cactcttcgacagggggacacttttgtccccttattcttttctctcccaa gtcctgtgtcagagacttttttttactaNgagtgcgattaatcgttaatt gcactattaccactttttgcactcttcggcggggagacacttttgtcccc ttattcttttgtCCCCCAAGTCCTGtatcagagactttttttactatata ataaaaaacaaagacatttttttcttcaatataaaaaagaacaaagaaat tttacgttacaatagcttcttttaattgaaaacaaagaaaaattacactg caatgttttatAATGATTATTttctgacgattacctcggaatcgtatgtt ttgtcgtgcaattaacgattaatcactcgtaacaaaggagaaaataccgt aatttgccctttgttactcgtgattaatcgttaattgcactccaaaccat acgattactagtactaatacaCACCTAAAGCATAAAATGGAATTTTTGTG ACAGTATTGAAATAGGGGTAATAATTaacaatttacagttaaaatgctct aaaaattgcATTCGCAGATTCAGTTGCCGAATTCCATGATGgtaatattc ttagcattattcttaatttttaagaataacatcatggatattcttataaa gtttattcttatatataaaaaagcgtgtacctatCCAACTGACTGATTat gatttctaagaaattaGTTTTCTTTTACCACAGGGTTTAGGGAATCCTTT AGGGTCCTTACGGAATATATTTCgctattttcaaggttttgatgaatttt ttagaTATGATTTTTAAGGCGTTTCGTTGTTAAAGGTTCTTCAATACTCA GCACATAGCGCAAGATAAAGTTTGCCTCAAAATAAcgaggataaaagaaa aaacaactgCTGTAAATTTTGtgacgatttccaaaaattaaatTGCTTTA GGAATGCTTGGATGGAGATGTGGACTTCCTGGATGTTCAATTCAACTACC CAACAAGACCAGATGTTCCAGTGTTGCAGGGATTGTCATTGCAAATAAGA ACTGGACAGAAAGTGGCGTTGGTGGGAGCCAGCGGTTGCGGCAAATCAAC AGCGGTCGGATTGCTAGAGAGGTTTTACAATCCAAAGAAAGGCGATATTG TAAGTGTGGTTGTAATCTCGTGCCCAGTCTCAAGCTCTTTCTATATATGA TGGTCGATTGACCCGGCTTGGATTGATTTGGAACAGGGGCTCATTGACTA CCAAATATTACAAACTTGCTCAAcgcgaaaacaatgaaattttgaacaag GGAATTTTGTATTTCACAGATATTAAGCTGAGTACTCACTAGATCTCACC GAGGGTGTTTGTCAGGCTATTCTCTAACACTACAAACGCATGGTTGCGTT TTGCATAAGTTGAAGCTTCGAAATTAAGTCTAAGCGTGGGTGGGTGGTGA TTAACGACTAGACTTCAGGCATCTTAGAGAACTTAAGGGAATTTCtctac acccctgtgtcagacCCTCTGGGACTCCCATCCCaaccaatttttgtccc cggtgggaaatttACCcgaaaatttcagccccactacaAAGTCTACTTTG ATTTCTTCActcccatttgaaattcaagggAAAAACTCAAAaccatcctc actggatttCTGGACTTTTCAACAACAATTAGATTTCGATGaaatcccca ctgtgggaaaaaatttcttcgggttgtgagacaggagtATGTTACTTTGC AAACGAACATTACCCCGTAACAGTTATCGTATTATCAAATATTTTACTGT ATAACACATATTATAAGCAATTCTAATCCCTTcttgggttggtctaaaaa tcAGGGTTGTGGGTATAGGTATTTGGGCAAAAAAGGGtgaccccacaacc tagcccaactgggataccctgctttttagaccaaccttCTCTACTTTTTT CTTTGTAGACGATAGATGGCATGGACATTTCTGATTACAATTTAAAGTGG TTACGTTCACAAATCAGTATTGTCTCACAAGAACCCGTCCTCTTTGCCAA AAGCATCAAAGATAACATCACGTACGGGTTGACAATGGATGATGGAAAGC CaatcccgcaaaaattaatcgaaGAGAGCGCCAGAAACGCAAATATTCAT GATTTCATCATGACTTTACCGTTGGTAAATGTAGTTTCTATATCTTAGAA CCTTTAACTCGAATTAttaaaactcgaaaaaattCTCCGGTCCCAACTTG AACAAAATACACAACCCTTAACAACGGAGTAAAAAAGTTACCATACTTAG TAGTGCTATTAGGTTCAAATTTAGTGAGGCTTTTCGAAAACTAACAAAAA GAACACCTGGGTGGTGTGGAGACCCAGTAGCGTTTTCCCTTTTCCCGAAG AAGAGTTTCTATTCTTGATTCAAATACCCCAAATGAAgcaatattttcaa gatatataTTCTGGATTTGTTGCGCGCTTAGGCCCCGacaaattcaaaat cttttcaaCCAATTTTTCGATCAATTCCTCTGCACACTGGGCTCCAACCC AGGGACATGGAGTAGGGTTTTTTTAAGGAATCACAACTGACAAAAATCCC TATGTTTTTTATTAGCAGTTCTTTCAAAATCTGGGCGGTGCCGTTATATA GGTTACTGGGTGCATTTACGCACCCCGTGAATATTTGAGTTACGCCGTTG TGTAGGTGCTTGGTGTGTTTACGCTCCCCGTACATGTTCGAGTTACAGAC ACTCCCTTGGTTTGAAAAGAATTTCGAACATTTCAATGAGAAAGGTTTTC AAGAGCACTTTCAAAATTTCGATTGGCATATAGTTAGAACAATCTGACAA GAATCTGACAGTCTATTTGAAGTGACTCTTTCCAATAATTGCTTAAAGAC CAGTTTTTTGTCAGATTCCTTAAATTTCATGTATAATTGTTGACCTCGTA GGtcgttaaaaattttctttaatgaAAATAATGAGAAGTTTGTAAAGATC GCAAGCCTAAATGTTGGTCCATTTTTATACTGGGAAGATAGACCTTgaca gatatcttcagagccttaAAAAGGGATCCCGatcagcggcacgtccccgt acccaattttgcctaagtccccccaGACTCAATTCGATATATTTGATCAC TTACTGTATTTAATGCATAACCTAACAACTTGATATTTTTCTAGGGTTAC GAGACACTTGTCGGTGAGAAAGGTACCTTGATATCAGGAGGACAAAAGCA ACGTATTGCTATCGCAAGAGCACTTATTCGTGATCCAAGGATTTTACTGT TAGATGAAGCTACGTCGGCGCTAGATTCTGAAAGTGAAAAGGTAAGGGCT ATAATATTTCCATTCCCAGGCTAAGATATCACTGACTTTCCGGAATTTTT CCGCTGCTTTTACCAAGATAACCGACTAAAAAATAGTAAGGACTCGCTCC AGATACAGAAAAAACCTTGtcaaatcagtcaatacgtcacttgcagcCAA AGCTGTAGGGTCCGTGAAAGACAGTGCAATTTTTCAACTAAGCGGAATCC TGGTCTTATGAGAGTGGCAGTGAAAACTTAATCCTGAAAGTGGAATCTCA TGCCGGCTTAGCAAAAGGCGCTATATGACTGCGAGAAATTTGGTAAATTA TTACTTCCGGAGGAGCGCACTAGGATATCAAGCGGAAAGAATGTGATGTT AAAAGAATTAACTCTTAAAATCAAATCCTTACCTTTACAGCAAAAGATCA ATATGATTTCATGTCATGCATTTCCCCAGAATTTCAGCATTCACAGAGTA TATAAGCATGTTGTTAATGGTCTAACAAAAGCATTGATGGGGGCAGGGGA AGGGAAATGCAGAAGGGAGTAGCGAGGAAAAAAAGAGAGTAGAGACTATG TTACCGGACTAAGTAGCGTGTGAATTTCTAAAAATCCCACTTCACTTTAT TAGAAAAAAggacttaaggccggtctccccTTTCGCGCAAAATGGTGACA GCTTTTTTCTCAACTGTTTTCGCCTGTAGAAACGTCATTAAAAAAGTTTc gagtgaaaaaataaaaagttgaaagaagttTAACTTTTTAAATCGTTACG TCAGATTtgcccaatggaattgcttcatttttcaaccgaccaatgacttt acaaaaacgttaaaaggttttcgctcatttcgcgcgaaagtggagaccgg cctttaatgCATGTTTCCCTGATATATTTATTTACTCTCACTTTTTTTCA GGTGGTGCAAGACGCCCTCGACCGAGCCATGGAAGGGCGTACATCAATCA TTATAGCTCATCGCTTATCAACAATCCAAAATGCTGATATCATTGCAGTT ATACAAGGTGGTCGTGTTATTGAATGGGGTACGCATTCAGAACTATTAAC AATGAGGGGAGCATATTATGTTTTAAACTCAGCTCAGATGTAAGACACGA ACCTACAGCGTTGTAAAACCCTCCTGTGGGGGCCAAGATCTTGAAGAAGA GAACatttatataaattttacacccttgtgtcacagaGCCACTGGAGCTC CACTgcagaattttgcaaaaaatttcgtccccgttggaaaaataccctgg aatttaaTCCCAtttggaaattgactttgatttcatcctcatttgaaatt caatgtttaaaaattctatttaaaattttttaaccatgaaacaatagaat ttctatatccccattgagatttcattAGGTTTTTATCCCAACAGAgtaaa aaaattccaccggggctgagacaggggtgtaattcaTCAAGGAATCAGAT GGCGCAAAATGTCAATAAAACATACAGCTAAAGtccataacgtccaaata aaaTACATTAGTGATATTGTGAAAAAATCCGCATTACTGAATGATTGGAG AGAATTGTTGGAATATTAACTATCTTTAGGGGACTTCTTACAAGAGGCCC CAAAGCGGCTTTCGTGATGACGTGGTAGGGACTTTTTTgaagcgtgatta cgtgatttagaaattttatcttcgtgattgcgtgtagactagtaaactag tcggttattacttataaccttataataaaactgtcaatcaaatattgtaa acactaattaaatattcagcgcgcgtgagagaaaaggaaaataaccgact agaagctacttccaacgcctttttttcttcacctaaaatcgtaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015025TCONS_00015025Clytia hemisphaericatranscript
TCONS_00015026TCONS_00015026Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015025-proteinTCONS_00015025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:80377..88271 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.47 0.46 0.66 4.39 2.51 2.68 4.27 4.46 6.96 29.88 2.3 48.83 49.49 18.38 28.29 28.44 24.09 23.23 21.76 32.19 30.21 8.52 12.21 24.75 26.44 40.15 43.45 3.06 2.43