XLOC_008536 (gene) - C. hemisphaerica

Overview
NameXLOC_008536
Unique NameXLOC_008536
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000208:145629..150717+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008536 ID=XLOC_008536|Name=XLOC_008536|organism=Clytia hemisphaerica|type=gene|length=5089bp|location=Sequence derived from alignment at sc0000208:145629..150717+ (Clytia hemisphaerica)
GAAGTTTTGTTCGATTTAGAGACGTATAATGAGGTATGAATTTATTAATC CTATGACGAGCGAAAAGCTAAACAAAAGGGGATTGGGTTCTAGTTTGCTA GCTTagattactttaggcgtacaaactttcgcgagcacaAACGTGTTCCT GCCTTTCGTTATTTAAAGCGAACTTAAACTGAAGTTGTCACCAGAGTTCT AAAAAATCACCTAAGTGATCAGACCGTAAAAGAAAAGCTTGCTCCTCAAT AGAGTCTATGAGTGCTCAAATAACCTAAGTTCAGAGCTCACAGATAAATA TTTTACGTTATTCGAACCGGTTTAACTTGAACCCAGTTCCCTTTTGACTT TAGGATTGCGATAGGTGTATTGAAGGAGACAACTAAAATGAATACAGTCC AATAATTTAtgaatatttaatttttgataccTACCTCCAGCTAAGATCTT CCATACTTAGCATATCAATCATTCCTTTGAAAATAtcgttcaaaatttca aacttgttTGACAAATACTGTCATCAAAAGACATTTCCTTATCTAACTAT ATCCAAAATGGTACCAAAAGTATGTTTAAGTTACCATAGTAattatttta caaaaacaagactaaaaattttttttatttttactcaACTTTTATTTTAG TAGAACGAAATTTTTTATCATGTGGTTTTGAAATGAAGGTAAGGTTCTTT ACGCTTACACTCAATCGGCCAGATACTACCTTATTGGCCAAAACTtatag tcggccttaattttagtcacctcgtcgaAATTTAGTCACTGAGGGctgac taataattaagaccgactaaaaatttgggttATTTCTAAATTCacaagca gatggaaaataggagaaagcttaaaattctagaaaataaggaaagcttaa ttataaacttttaatttggcccaaatttttagttggcccaaattttagtc ggccctagtttttagtcggccctaattttagtcacttagggccgactaag ttttagCCGATaaggtaccttatcggggaaaaacgTTGCGGTTTTAATTA GTCAGGGTTTAACTTTCGAGGGTGGATTTCATCGCCTGTAGacaatttcg tcacttttctaAAAGACCAAAAtctcaaattcgtcactttccaGATCGAA TTTAAATTTAGTCACATTTTGTCGACTCattttaaaaacttattttttcc cAGAAGGCAGCATAATCCTCCCAGCttgcacacgacgttgtttcaacgtt tatctaacgttcacaacgtccatataacgttaaatgaacgttgaaacaac gttacgttgtgtgccagctggctGTATCTTCATAAGGAGGAAtgaaaaaa tggagaaaaaactgTAAAGGTTAAAATATCGGGTGATCAAATGTcgagga attttttaatacATATATCCACATTCTATTTTGCCATAGAATTACATTTT CTTCGTTGTGCTTGGGTTGGCGTCGATTGTAACGTTTCCCCAAGGTAATG GAAATAATATGTCTTACTTTACCCAGAACTCACTTGCCTGCTCTTGAAGA TAAGATGACCTTTCCTTTCCATTTTTAATAATCATGTTGCAATCTTTTAA TACGCATTTAACGACAAAACGTATTTTCCAGCTGGTGTATtgtattaaag tctgtccagatataattggcagtggaaacaagaatgcctgtaacttttga tagtcaaatataattatgaaatttttttttgcttgttttagagaatcaaa agcgctatatttgaatgtatttttgtttgaaaaattcgcgatttttagcg gtttaatttgcgattgtaaaaattgagcattttttctacttatgctataa cgttcatttttacaccagtggtagttcaaccttaggttgagaagtttgtt aaatttcaaggcaaacaaaagagtccttcggaagatataggacccgaaat accccttggtagcactttctgtgaaatatcaaatctccaacttattacta aaaacgggggtagtgatatgattgatgaaacagtttttcgatcataacac attttacaatcTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNgaaaaaagctcaatttttacaatcacaa attaaaccgctaaaaatcgcgaatttttcaaacaaaaatacatttaaata tagcgcttttgattctctaaaacaagcaaaaaaaattttcataattatat ttgactatcaaaagttacaggcattcttgtttccactgccaattatatct ggacagactttagttcgaAATTAGTGGCAAAAATCACCTTTGTCAATAAG GAACCGAATCAATTTTAAATGTTAACTTTAGCCAAATTTTATTCAACACA TTCATAGTGTACCTTTGAAATGTTGCTTTTTAAACAAGACGCCCTGATGA AATAGCTCATTATATACCAAATAATATTTCCCAACGCTTTTTATTTAGCC CTGGCTTGTAAATACACGCGGATCCATATTGCTACATATGAAAATGACGT CAACCTAATGACTGTCTACATTTTATGGGACGAATCGCAATGCCCTGGTA CCAACAAATTCATTATATTCTTTCAAAAACAACTCTTTGGAGGAGCTCAT CAGGCAAATATCGAAACACCAATCAGAGAAAATGGAAAGAAATTGTTACT CCACGCTGACAGTGTTTATTTTGTACGTATGAACGCACTATACAACAGGA TTATTTTCACCGGAAAAAATGGAGGTAATTATATATTAATTCTCTTGGAA TCTTGTGATATAAGCATCCTTGTAAGCATTTTTGAGCCTTGTCAAGCTCT CGAGCTAAGCATCTTCGAGTagcttgttttcaaatttttgtatgcttata aaaaaatgtaaaagaaaaagcgtgtaacaagaacaagttaaaaacatttc aaggctCTGCAGACTCTATAACGCCTCATTTTCTTTAGAATTtacacaaa atggtgaaaataagaacaagctaagaacaattttaggcttaaaactcaga aagttaaAAACACCTGAAGGCTTTGAAAatgaatgttcttataagaaaaa cgtgtatatgcTGATATAGTTTTCGATGGGCtttctatttcaaaaacatt ttaagtcCTTTGAAAGTTTTTCCCTCTCTGATTTTAGTCCTATCATATGA AAATTTATGATACCACACTTATGAATATCTTCTCAACGAGAAGAAAGGGA GATCCATTTGAagtaaaaagcttaaaaattaattcttttttggataaaat ttaaaacatatatTTTAGTCGTTTCGGTGTCATCTGATCaccattcaatt ttttttttcaatttttactgaTGATGGTGATCGGATGACACCGAAACgtc taaatatattttattcaaataaaatgaaaacgcttctgTGTCTGAACTTT acgttgaaaaaaaatattcaggaggatcaattaaattttgttttgttact GCTGAATATTATATTAGGAAAGATTTCATCTTAAGTTCTATGTCATGATA TTTTGATCACAcgaattgattgatttattacAGATTGTGAGCGTAAGCCA TACTACCAACTTCTGACAGCCAATGGCAATAACCAACCAGAGGTAATTAA TGTAATCAGACTGGTATAATAAGAAACTAAGTCCGAATATGAGCATCTga cagggctgcaaataagccTCGGTCATCGGGTGCTTGACTGACTAAAAAAA GGTGCTTGACTGACTGAAAACCATTTGTGTCGGTCACAGTCTGTAATTCT ATTCATATTAGGGAACGTCTTTAATTGCATTTAAAGTTTCATGATCGACA CACTTGAAATTCTTGTCTTTCTGAAAATCATCCTTAAATATTCTTAATGT ATTCTCAGGTTAGGAACCTAAATTTTACATGTACCTAAAGCAATAATTAC GTTTTGTGAAAGCTTTGAAATCCTTTGAAACTTTACTGGAGGATAATTTT GCCAATTTCGTAGGTCACTCGTCAAGTTCCATGCTggtgaaagatatttt taaaatttaggcTAATTCAATTATACGAATGATTTTTTAGATACATTCTT GTAGCTCCTTTACTAACAATAAAACGCTACGCATTTTTGCTAGCACAATC CAATTacatttccatacaggggggagGGGTGGACAAACCTTTTTAAGACA AATATAAATTCTTAGAAATATATGTGGATACTCCCTGGAGAATGGCAAAA TGTGGAAATGGAAATGTTCTTCCGCcacctgtatggatataaaatggaat ggcccatttaaCTAACTGACTGACCAGGATTTCATAACACTTTTTGCCAA AACATAATGGGCATAATTTGTCGTTTAGTAAATAACTCCATATAATATCA ATTCATTATTATCCATAGGATTGGAGCTACAACTCTTCGATGTGGCAATT AGAAGAATACAGAGAAGCACGCATTAGTTCTGGTTTAACCGGCTTAACCA AGGTCAGTGAAAAAGCTAAGAATCGAAAATTCAATCAATTTTGTATTGGT ACAAAGCGTGGCAATTATTTCCATTGGGTTAAAACTGGTTGTAACCAGAG TGTATCTTTGAAGAGTGCTGTCCATGGTGGATGTACGTTCGACCAAGAAA CAAGTTCCAACAATGCTAGTTTTGGACGAATGGTTAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015261TCONS_00015261Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015261-proteinTCONS_00015261-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000208supercontigsc0000208:145629..150717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0 0.08 0.91 0.65 0.44 0.41 0.17 0.78 0.34 0.36 0.23 0.56 0.35 0.45 0.87 0.68 0.07 0.23 1.84 2.4 0.62 0.71 4.44 4.55 0.09 0.1 0 0.23