XLOC_008627 (gene) - C. hemisphaerica

Overview
NameXLOC_008627
Unique NameXLOC_008627
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000211:58615..64309-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008627 ID=XLOC_008627|Name=XLOC_008627|organism=Clytia hemisphaerica|type=gene|length=5695bp|location=Sequence derived from alignment at sc0000211:58615..64309- (Clytia hemisphaerica)
ACGATGGTCAATGACGGAATGTTGAGCCGTCAAAATTGAGGTGCCGAGTC GAAGGTCACAAGATTCTAAATTATATACTGGGTAAGAAAAGATAGATGAG GGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGT GAATTAGTTTGAGGTTGGCTGTAAAGTCGACTCTCTGCTTTCTTGTATAT CAATTATTAAAGTCGTGTAAATTTGTTGAAAATATTCTGTTTTCTTTTTG ACACTGGGAACGATGGTCAATGACGGAATGTTGAGCCGTCAAAATTGAGG TGCCGAGTCGAAGGTCACAAGATTCTAAATTATATACTGGGTAAGAAAAG ATAGATGAGGGGGGGGTACTGTATATTTGAAAAATTTTGATTCGTTATCT TTATTCAAACAGCAATAAGTACAATATCTGCAGAGGTTAAATTCATTCGA AATTATGGTGGCACACTTTGAGCATGATTGTCTTCGAACTTTCGAAAACA ACAAATTAATAAATTTTACAAACGAGCAGAACAAGAGAGATTGAGTCTTT TTCGTTCTTGGTTGCATGTTCTAATGTTTTCTAAAGAAATTCTATTTAAT TTTTGAATATTAATTGAAAAAAATAAACTCTGAGTTTGATGTAATCACGT ACACAATTAGCCATCTGATGGAAATACGACAGTCCTTGGTTTGAAATCTT AAATTAAAGAGAAGGTTTTTTGGGTAACTTTTTATCGCTCATGGGTAACA GAAAATGTGTTTGAATTTTTGGGGCTTCAAAGGGCTTTCATTCATTTATT AGGGCACCATTTGGTCATTGACGTTACAAAACTCCATTGGCTTAATGGAG AGACATAACTCAGTTTCTATCTTATCTGCTTTTCTAAGAATCTTGATTTG GGTAGGCGAGGTAACGATCAATATTCTCGCTAAATAAAAATATAAAGACA GCTGATTCTATAATCACAATATTCTCCTATTTTTTACTTCATAATTTCTC GAAAGTGAAGATTTATGTAAATAGAAATTGAAGATTTACTCTTCTCACTT TTCACTTCTTGATATTTGAGCTTAGAGACATTAAGCTTTTTGGCACCGTT ATCCCTCAGTTTTTCTCTCGTTTGACGAAGTTGGAGTTGTTTTGAAGTGC GGTGAATCNTGACAACGTTATTCCTCAGTTTTTCTCTCGTGTGACGAAGT TGGAGTTATTTTGAAGTGCGGTGAATGTTGTTTACATTTGGACTTCAGTT TGACTTTTCTCCCCTCGCCACAGACTAAGATTATAACCAACTCTTGGCTT TTTTGTTTCTGCTTTACAACTCTCCCCGTTTTAATTCCTTAGACTAAAAC ACGTAAAGACTACAACTATAAACAGCTATAAAAGGAGAAAACATTGAACT ACAGACGGAAGAAGCACAAGATGGGGCGCAAAGAGCTGAAAATCTATTTG GATAACGAAAAGGAATGTTATTTTGCCGGTGAACAATTGACAGGTCACGT GACATTGGAGCTGAATGAGCCAACGAGCGTTTTGAGAATCATTCTCTACG TCAAAGGTATCGTAAATTTTTCCTTTTAGCTAAGACTTTTATTTCCTTGA TAAAAACACCCCTGTGTCACGTCACAGACCGGGTAGGACCCCCTACCCCA TTGAAAATTAGGCTAAAATTTCGTCCCTGATGTGGAAAATAACCTACAAT TTAAGCTCCTCTGGGAAATTGATTTTGTTTTCATCCCCATTTGAAATTCG ATGGAAAAATTACACTCCAGATTCATCCCGACTTTTTGACCTGGGAATTT CTGTCCCCACTAAGGATTTCGATTGAAATTTTCATCCAATTGTGGGAAGA AGCTCCTGAAAAAGTGGTATATAAGAAGACTGTGATGTTGTAGTAAACAT CCCTGTCTGAGTGGCTGGAAACGTATACATGTTGATGTGAAGAGTCAGAT TCGCAGCCAAAACTTCCACCGGGTTTCTTAAAATACTGTCTTCAAATGGT GTAGTTTGATAAAAGGTTCGATTGATAGCATTCTAAATCTGAAATTTGAT TTAAGGATATTTTTCGAAGCTTCGAAAGTCCTATATACTATCTCGGCTGT TTTTTAAGTCCAATTACAGTGAGATTTAGATAACGGACATTTTACCGTAA CAGAGAAAGTTAACTTAAATGATAGGTAGTCCACCTTTCACTTCGACACT GCTTCAAACATTTCCTTCATTTTCATCAGGAAAAGGAATTTGCAAAGTGG GAAATTCCTGCAAAGAAGTCTTTTACAAAAATGATGTCACACTGTACGGA ACAATGCCGGGACAACACGCGGTAACACGACAGCACCCTGTCGGTAAACG AAATTATCGGTTTAATTTTCTGCTACCTACGGAATTACCGAGTTCGACGG TTGAAGGGGGAGGATTGATCAAGTACACACTGACAGGTTTGTATTTCTTT AAGTATTTTTTGATGTTTTTACATTTCTTAATCTTACCAAAGCTTGCTAT TCAGTAACGTAGACAGGAGGGGCGAAAATTTGTGTAGTTAATTAATACCA TGAATAGATAATTACAGTGTCATAAAAATCTGCTCTTCTACAACCAAGGG AATTAAGATTCATTTTTAGAAACTTTCCAGCTTTTTGGTGATATACTAAA CTTAAACTAAAGCTAGAACTTCACTCACCAGGTAACAAGAAGTTTAAATG AATGATCTCCTAGTAAGGACGAATTTCTATTGATAAAGATGCTTATAATA GTCCGTATAAAAACCATCGGTCTCAACATAATTTACTTTTTTTTACTTTT CAGCGAAAGTCGTATTCAAAGCACTCCTTTCAAGTGATTGGCAAATGAAG AAAAACTTCCAAGTCAAACAAATCTTGGATGCAAACATTCCCAATTACGA TTTGGAACACGTGCACACAGTTAAAAGAGTGGCCAGTATTTTCACCAGTC AAAAGAAACTTGAAAAAGAAGGTGAATACGATATGATCATATTTCTTCAA ACATGACTAAATACTTCCTTGAGTGATTTTGGTTCTTACTTACAGAACAC ACAGATTTGACTGCTATTCGTCAGAGAATTCAGCATCTTTCAACCCTGCA AGTGTGGTTTTGTTATATTTTTGTTGCTGAGTCTTTTTAAAGATGAATTA TGTTAGATTTAGTCCATTGCCTAGAATTTAACCATGAAAAATGAGAATAC CTCTTTTTCAAAAGATATTAGTTTGGAAACAGTTCTCAATGCACCATTGT TGACATTTTTACGAATTTTTCTTGTTAAGATTTGCTGATGAGTTTACAGC GTGGTGTGTACTGCCCTGGAGAAACCATCAAGTTGAATTTACAATACAAG TACGTTGAAGCGAGAAAGATGGGTTTGGTCAAATGCCGGTTAAACAAATA TAAACGATTGAATAAAAAAGAAAACAAAAATATTTACAAAAAGACAGTCA AAGAAAAGAATGGTAAGTCATCATTTCTACAACTTATTATGTTATGACCG AAACCTTGAAGCTATTGGCAGCAGGATTTTTATGAAAACCCTATCTCCAC ATGAACTCCAAAACTCCAAAAAGTAGTGGCTTGTTTACCAGTATTTATAG TTTCTTTCATTGAAAAGTCAGGTGTGTCACCGGTACCCTGAGCTTCCACT GAACATGTTGCCTTCATCAAACTCTTAGTCAAGCATGCTAGACGACTAAT TTAGACATCAAGGAACAATAAGCAAAAAATAATGAAAGAAACAAATTTTT TCCTTTTACGAACTGATATTATCCCATTGCATTATAACATAACATCGTAA TGACACCCATACTATAATACACGGATTATAAACAATACCCCGCCGATCTA TTGAACTCTAAAAACCTCTGAAAAGTGTCACAAATCAAACCAATCAAAGT CCATGAAAATGTGCATTGGAGAAGATGAACTATATACAGTTTTGTTCAAT AAACTGAGATTTTCATCTTGATTCATTTCACAGACAGTAAACGATGCGAT GATAAAATTTACCAACGAAATATTTCGATAGAAGTTCCGGAAAAACTTAC GCCCACCAACACCCTTACAAACGCCCTCTGCATTGAGTATGTTTTACACG TTAAAGTGGAAGGGTACAAAGAGTGGAAATTACCCATTGTTATTGGAACA ATACCCTTCGATGAAAACAGACAACAACAGCAACAACATCAGATAAACAC GCAAGGTAAAGTTTTTTTTGAGCTTTCTTGAGCTTCATTAAATATTATTA CTTCCTTCCATTTTTGTATTTTTAAGTTGTCGTCTTCTATGTCGTAGAGA AGTTGAATGCTTTGTCATTTGAGAAAGTTTTTGGATTGTTGGATAACGTC AATCTTTCTTTTTATGAGACAGAGATATTATATGAGATTCTCATTTGAGA CAGGGGTGAGCATAACGGGAAACTTTTAGTTAAAACAAGGGTAAAATCTG ACTTGATCATGGGTGTCATGTTATGAGAAACCTTCATTTAGCTCATGCAC TTAATCCGATGTGAACTCATTTTAAACAGGGAGATTGGATTATATTAAAT TTTCGTATGAGACAAGGATATCAAACCAAGTGAAATTTCCCAAGAGACAG GGGTGTAGTTTTACGTACAGTTTTTATTGAAGACAAGGTTGTGAAATTGA AATTTTCATGTCGTAAGATTCGTGAGATTTGGAATCATTTTCATGAGATA ATGGTGTCCTAACATACTATTCGGAAATATATTGTTTGAAAAAACGGATG GTTTATATTTACTTTAATTTTTCTCTTTTTCTCCAGGACAACCACAAGTT ATAACCGAGCCGTCAACCTCAAGACCGACCGCCCCTCCTTCTGCCCCTCC TTCTGCCCCTCCTTCTGCCCCTAGTGCACCAGTGGAAGTTCCATCGGGTA ACAGCCTCATCTATCCGATAATTCATGATATTGGTGGTGAAATCCAATGT GAATTTTTCCACCCACCACCCTACGTTCCAGAAAACGAATTTGATCTACC GCCTTCTTATGATGAAGTGTTACAAGAAAATCCAACGCCTGGCTCGTCCG CCCCATCCGCCCCATCCGCCCCTCACGGACAACAATTGATCGCTGCACAG TGATCATTAACAGCGTTTATGGAAGGTGGTAGTTCATTTGATTTACGACA TCATCAGTGAATATGCTGGAATCTATTCAAACGATAATATGTTGGTTCCT GAAAGATTTCGTGCATTTTTAGCAAAATTTGAGTGCTTTTGCGCTTTCTT GCAGGCAAGAATCGTGAAAGTAGGATGTCTTTGGAATGATGTAAAATAGT TCTGTTACTTTGAAAACGAATAGTATTCTACGAAATGATCGAATGTATCT GAGTTGCTATGGGTTGCTATGGGTTGCTATGGGTTGCTAGAAGCTTCAGT TTTCATGCTGGTTCGTGAAAAAGTCCATAAAATCCTTTTCCGTTAGTTTA ATATGAAGCCTTTATTGTGAATTTGAAAAATCTTTCTTAAAATTTATTTA GAATAAAATTTTTGTATAGTATTTGTTTTTATTACTGAAAAACTCTCAAG AAATATAGAAAAAACTTTTTACTTTGTAAAATAATAAAAAAGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015455TCONS_00015455Clytia hemisphaericatranscript
TCONS_00015454TCONS_00015454Clytia hemisphaericatranscript
TCONS_00015453TCONS_00015453Clytia hemisphaericatranscript
TCONS_00015452TCONS_00015452Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015455-proteinTCONS_00015455-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:58615..64309 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.77 18.28 24.34 24.12 2.91 1.81 7.82 8.73 6.2 15.39 13.93 4.3 30.66 21.22 18.14 36.48 16.1 21 23.88 41.43 6.18 6.69 39.34 33.18 18.36 24.7 120.56 104.87 111.98 87.5